Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is pstS1 [H]
Identifier: 119356865
GI number: 119356865
Start: 1174964
End: 1175776
Strand: Direct
Name: pstS1 [H]
Synonym: Cpha266_1038
Alternate gene names: 119356865
Gene position: 1174964-1175776 (Clockwise)
Preceding gene: 119356864
Following gene: 119356866
Centisome position: 37.49
GC content: 49.69
Gene sequence:
>813_bases ATGAAAAAACTGATGCTGTTTCTGTTTGTCATGCTGTTTGCCGGATCCGGTTCACTTTTGGCAGCACCAAGAAGCATTGT ACTTGACGGCTCGACGACCGTTGGTCCGATTGCAAAATCCTTTGCCGCATATTTTACGAAAAAATATCATCTGCCTGTTA CCGTCAGTGAGTCGGGAAGCGGCAACGGCGCCAAAAGTCTTATCAACAGGTCTTGCGATATCGCAACCATGTCGCGAACC ATGAAAAAAGAGGAGCTTGGTGCAGCAAAAAAGAAAGGGGTAAATCCGGTGGCAACCATTGCGGCTCTTGACGGAATTGC CGTTGTTGTGCATCCAGGCAATCCGGTTCGAAATCTCACCAAAGCGCAGATCGCCGCAATATACCAGGGCAAGGTCAGCA ACTGGAATCAGGTGGGCGGTCCTGACTCGAGGATTGTCGTCATTCAGCGAGAGTCGAACAGCGGAACCCAGGAGTCATTC AAGGAGCTGATTGTCGGAAAATCCGCCCAGATCGTCAGAACCGCTGAAACCCAGGCCAGTAACGGCGCCGTAAAAAGTCG TATTGCCGTGACCCGAACCGCAATTGGTTTTCTTGGTATGGGTTTTGTCGATCGCACCGTCAAGCCCCTTGCCGTCAACG GCATTCAGCCAACCGTGTCGACAGTCAAAAACAGAACCTATCCTGTTTCGCGACCGCTCTATTTCTATACCAACGGTCAA CCGGCAGGTACGATAAAACAGTTTGTCGATCTTTCAAAAACAGTCGACGGGAAACGCATTGTCAGCGAACTTGGTTTTAT CAATAACTATTGA
Upstream 100 bases:
>100_bases CGCTGAGTACCCTTGCGTTTTTCAAAGGGAGCGCTTTTTCATACCTTTACTTTAGGTAACCACGTAAACGTTTTGAATAA AAACAATGATGAGGATAGTT
Downstream 100 bases:
>100_bases CAGGGCAGCAGGGCTCATGGAGTTAACCTGAATTGAAAGTGGCAATCCTGAAAAAAGTTGCCGAAACGGTTTGTATTGTT GCAGAGATGTAACAATAGGT
Product: phosphate binding protein
Products: NA
Alternate protein names: PBP 1 [H]
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MKKLMLFLFVMLFAGSGSLLAAPRSIVLDGSTTVGPIAKSFAAYFTKKYHLPVTVSESGSGNGAKSLINRSCDIATMSRT MKKEELGAAKKKGVNPVATIAALDGIAVVVHPGNPVRNLTKAQIAAIYQGKVSNWNQVGGPDSRIVVIQRESNSGTQESF KELIVGKSAQIVRTAETQASNGAVKSRIAVTRTAIGFLGMGFVDRTVKPLAVNGIQPTVSTVKNRTYPVSRPLYFYTNGQ PAGTIKQFVDLSKTVDGKRIVSELGFINNY
Sequences:
>Translated_270_residues MKKLMLFLFVMLFAGSGSLLAAPRSIVLDGSTTVGPIAKSFAAYFTKKYHLPVTVSESGSGNGAKSLINRSCDIATMSRT MKKEELGAAKKKGVNPVATIAALDGIAVVVHPGNPVRNLTKAQIAAIYQGKVSNWNQVGGPDSRIVVIQRESNSGTQESF KELIVGKSAQIVRTAETQASNGAVKSRIAVTRTAIGFLGMGFVDRTVKPLAVNGIQPTVSTVKNRTYPVSRPLYFYTNGQ PAGTIKQFVDLSKTVDGKRIVSELGFINNY >Mature_270_residues MKKLMLFLFVMLFAGSGSLLAAPRSIVLDGSTTVGPIAKSFAAYFTKKYHLPVTVSESGSGNGAKSLINRSCDIATMSRT MKKEELGAAKKKGVNPVATIAALDGIAVVVHPGNPVRNLTKAQIAAIYQGKVSNWNQVGGPDSRIVVIQRESNSGTQESF KELIVGKSAQIVRTAETQASNGAVKSRIAVTRTAIGFLGMGFVDRTVKPLAVNGIQPTVSTVKNRTYPVSRPLYFYTNGQ PAGTIKQFVDLSKTVDGKRIVSELGFINNY
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 28813; Mature: 28813
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLMLFLFVMLFAGSGSLLAAPRSIVLDGSTTVGPIAKSFAAYFTKKYHLPVTVSESGS CHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHEECCEEEEECCCC GNGAKSLINRSCDIATMSRTMKKEELGAAKKKGVNPVATIAALDGIAVVVHPGNPVRNLT CCHHHHHHHCCCCHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHCCEEEEEECCCCHHHHH KAQIAAIYQGKVSNWNQVGGPDSRIVVIQRESNSGTQESFKELIVGKSAQIVRTAETQAS HHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCC NGAVKSRIAVTRTAIGFLGMGFVDRTVKPLAVNGIQPTVSTVKNRTYPVSRPLYFYTNGQ CCCHHHHHHHHHHHHHHHHCCHHHHCCCCEEECCCCHHHHHHCCCCCCCCCCEEEEECCC PAGTIKQFVDLSKTVDGKRIVSELGFINNY CCHHHHHHHHHHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure MKKLMLFLFVMLFAGSGSLLAAPRSIVLDGSTTVGPIAKSFAAYFTKKYHLPVTVSESGS CHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHEECCEEEEECCCC GNGAKSLINRSCDIATMSRTMKKEELGAAKKKGVNPVATIAALDGIAVVVHPGNPVRNLT CCHHHHHHHCCCCHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHCCEEEEEECCCCHHHHH KAQIAAIYQGKVSNWNQVGGPDSRIVVIQRESNSGTQESFKELIVGKSAQIVRTAETQAS HHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCC NGAVKSRIAVTRTAIGFLGMGFVDRTVKPLAVNGIQPTVSTVKNRTYPVSRPLYFYTNGQ CCCHHHHHHHHHHHHHHHHCCHHHHCCCCEEECCCCHHHHHHCCCCCCCCCCEEEEECCC PAGTIKQFVDLSKTVDGKRIVSELGFINNY CCHHHHHHHHHHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12354221 [H]