Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119356828
Identifier: 119356828
GI number: 119356828
Start: 1139574
End: 1139981
Strand: Direct
Name: 119356828
Synonym: Cpha266_1001
Alternate gene names: NA
Gene position: 1139574-1139981 (Clockwise)
Preceding gene: 119356827
Following gene: 119356829
Centisome position: 36.36
GC content: 46.81
Gene sequence:
>408_bases ATGAATAACGAGATGATTATTACTTTTGGCGGTGGCAAAAAAGTCAATGCCGAGTATGGAGGGTTCACCATCCATACTGA TCAGTCTGTGCGAGGCGGCGGTGAAGGGTCTGCGCCGGAACCTTTTGCGCTTTTTCTCGCCTCGATCGGCACCTGCGCAG GAATTTATGTTTTTTCGTTTTGTCAGAATCGTGAAATACCTACTGACGGCATCAGAATTGTCCAGTCCCATTACCCTAAA GAGACCGGAAGGGGTATCGGAAAAATTGTGCTGACCATTGAACTGCCGCCCGATTTCCCTGAAAAATACAAGGAAGCGGT CATTAACTCTGCCAATCTCTGTGCGGTTAAAAAACATATCATGGATCCGCCTGAGTTTGAAGTCGTTACGATGACGACAG AGATGTAA
Upstream 100 bases:
>100_bases GAGCATATGCTTATAATTGCATCGTTATGCTGTTGAAGGAAGGAAAGAGTAACAGCTAAAAGCGTGTAGTATTTCAAAAT ATTTTTACCTGTTTTTCCCG
Downstream 100 bases:
>100_bases CTTTTCATCATAAACTCAAACTATCACAAAACCACAGAACATGACTACTGAAGCAGTACACGGCGGGCAGCATAACAAGC TCCGAAATTTTCATATAACT
Product: OsmC family protein
Products: NA
Alternate protein names: OsmC-Like Protein; Multidomain Protein; OsmC-Like Domain-Containing Protein
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MNNEMIITFGGGKKVNAEYGGFTIHTDQSVRGGGEGSAPEPFALFLASIGTCAGIYVFSFCQNREIPTDGIRIVQSHYPK ETGRGIGKIVLTIELPPDFPEKYKEAVINSANLCAVKKHIMDPPEFEVVTMTTEM
Sequences:
>Translated_135_residues MNNEMIITFGGGKKVNAEYGGFTIHTDQSVRGGGEGSAPEPFALFLASIGTCAGIYVFSFCQNREIPTDGIRIVQSHYPK ETGRGIGKIVLTIELPPDFPEKYKEAVINSANLCAVKKHIMDPPEFEVVTMTTEM >Mature_135_residues MNNEMIITFGGGKKVNAEYGGFTIHTDQSVRGGGEGSAPEPFALFLASIGTCAGIYVFSFCQNREIPTDGIRIVQSHYPK ETGRGIGKIVLTIELPPDFPEKYKEAVINSANLCAVKKHIMDPPEFEVVTMTTEM
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14715; Mature: 14715
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNEMIITFGGGKKVNAEYGGFTIHTDQSVRGGGEGSAPEPFALFLASIGTCAGIYVFSF CCCCEEEEECCCEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH CQNREIPTDGIRIVQSHYPKETGRGIGKIVLTIELPPDFPEKYKEAVINSANLCAVKKHI HCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHC MDPPEFEVVTMTTEM CCCCCEEEEEEEECC >Mature Secondary Structure MNNEMIITFGGGKKVNAEYGGFTIHTDQSVRGGGEGSAPEPFALFLASIGTCAGIYVFSF CCCCEEEEECCCEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH CQNREIPTDGIRIVQSHYPKETGRGIGKIVLTIELPPDFPEKYKEAVINSANLCAVKKHI HCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHC MDPPEFEVVTMTTEM CCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA