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The map label for this gene is hoxK [H]

Identifier: 119356800

GI number: 119356800

Start: 1114304

End: 1115386

Strand: Direct

Name: hoxK [H]

Synonym: Cpha266_0972

Alternate gene names: 119356800

Gene position: 1114304-1115386 (Clockwise)

Preceding gene: 119356799

Following gene: 119356801

Centisome position: 35.56

GC content: 48.11

Gene sequence:

>1083_bases
ATGCAAAAAAACCAGTCTTTTGCCGATATTTTCAGGGCCAGTGGCGTGAGTCGAAGAGATTTTTTAAAGTTCTGCTCACT
TACATCGGTTTATCTTGGTCTTTCCCCTTCGATGGTACCGAGTATTGTTCAGGCCATGGAAACAAAGCCAAGAACTCCGG
TTATCTGGCTGCATGGTCTTGAGTGTACCTGCTGTTCCGAATCGTTTATCCGCTCCTCTCATCCTACTATCGAAGACATC
ATTTTCAATATGATTTCACTCGATTATGATGATGTTCTCAGCGCAGCGGCAGGTCATCAGCTTGAGGATGTCCGAAAGAA
GACGATGACCGATTATAAAGGGAAATATATTCTTGCCGTTGAGGGAAATGTGTCAACGAAAGACGATGGCGTGTACTGTA
TGGTGGGTGGCGATTCTTTTCTCAATACGCTCAGGGAGACAGCCGCTGATGCTGCCGCAATTATTGCATGGGGCGCTTGT
GCTTCATTCGGTTGTGTGCAGAATGCCGATCCGAACCCTACAGGGGCCGCACCGATTTCAGAGATTATAAAGGATAAACC
TATCGTCAATGTCCCCGGCTGCCCTCCGATTGCCGAGGTTATGACCGGAGTTATTACGCATTTTCACACATTCGGTAAAC
TGCCCGACCTTGACCGCTTCAATCGTCCCAAGGCTTTTTATAAAACGAGGATTCATGATAAATGCTATCGTCGTGCATTT
TTTGATGCCGGCATGTTTGTCAGAAGCTTCGATGATGAATCGACCAGAAAAGGGTGGTGCCTCTATAAGATGGGTTGCAA
GGGACCGACAACCTATAACTCATGTTCGACGATTCAGTGGAATGACGGGACAAGTTTTCCGATCGGTTCGGGCCACCCCT
GTATCGGCTGCTCAGAACCGCATTTCTGGGACAATGGGCCTTTCTACAAGAGACTTGCCGATGTATCGTTCCTTGGCTCT
GATAGCAATGCGGACAGAATCGGAGCTGTGGCGCTTGGAGCTGCGGCGGCCGGAGCTGCGGCACATGCGACGATTACGGC
AATTAAAAAGGGAAAATCAGGTAAAGGTAATGACAAAGCTTAA

Upstream 100 bases:

>100_bases
CGGTAGAGCTGATATGGAAGCAGCTTGAGTATTCAATTATTCTTGCCCTTGTTCTGTTGACAATTCCTGATTAACCGATC
TATTTCCTCCGGAGGCAGTA

Downstream 100 bases:

>100_bases
AGAAGGAGTGATTCGTTATGTCAAGAAAAATTGTTGTTGATCCTATTCCCCGTATAGAGGGACACCTGAGAATTGAGGCA
AAGCTGAATGAGAGCAATCA

Product: hydrogenase (NiFe) small subunit HydA

Products: NA

Alternate protein names: Hydrogenlyase; Membrane-bound hydrogenase small subunit [H]

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MQKNQSFADIFRASGVSRRDFLKFCSLTSVYLGLSPSMVPSIVQAMETKPRTPVIWLHGLECTCCSESFIRSSHPTIEDI
IFNMISLDYDDVLSAAAGHQLEDVRKKTMTDYKGKYILAVEGNVSTKDDGVYCMVGGDSFLNTLRETAADAAAIIAWGAC
ASFGCVQNADPNPTGAAPISEIIKDKPIVNVPGCPPIAEVMTGVITHFHTFGKLPDLDRFNRPKAFYKTRIHDKCYRRAF
FDAGMFVRSFDDESTRKGWCLYKMGCKGPTTYNSCSTIQWNDGTSFPIGSGHPCIGCSEPHFWDNGPFYKRLADVSFLGS
DSNADRIGAVALGAAAAGAAAHATITAIKKGKSGKGNDKA

Sequences:

>Translated_360_residues
MQKNQSFADIFRASGVSRRDFLKFCSLTSVYLGLSPSMVPSIVQAMETKPRTPVIWLHGLECTCCSESFIRSSHPTIEDI
IFNMISLDYDDVLSAAAGHQLEDVRKKTMTDYKGKYILAVEGNVSTKDDGVYCMVGGDSFLNTLRETAADAAAIIAWGAC
ASFGCVQNADPNPTGAAPISEIIKDKPIVNVPGCPPIAEVMTGVITHFHTFGKLPDLDRFNRPKAFYKTRIHDKCYRRAF
FDAGMFVRSFDDESTRKGWCLYKMGCKGPTTYNSCSTIQWNDGTSFPIGSGHPCIGCSEPHFWDNGPFYKRLADVSFLGS
DSNADRIGAVALGAAAAGAAAHATITAIKKGKSGKGNDKA
>Mature_360_residues
MQKNQSFADIFRASGVSRRDFLKFCSLTSVYLGLSPSMVPSIVQAMETKPRTPVIWLHGLECTCCSESFIRSSHPTIEDI
IFNMISLDYDDVLSAAAGHQLEDVRKKTMTDYKGKYILAVEGNVSTKDDGVYCMVGGDSFLNTLRETAADAAAIIAWGAC
ASFGCVQNADPNPTGAAPISEIIKDKPIVNVPGCPPIAEVMTGVITHFHTFGKLPDLDRFNRPKAFYKTRIHDKCYRRAF
FDAGMFVRSFDDESTRKGWCLYKMGCKGPTTYNSCSTIQWNDGTSFPIGSGHPCIGCSEPHFWDNGPFYKRLADVSFLGS
DSNADRIGAVALGAAAAGAAAHATITAIKKGKSGKGNDKA

Specific function: This enzyme recycles the H(2) produced by nitrogenase to increase the production of ATP and to protect nitrogenase against inhibition or damage by O(2) under carbon- or phosphate-limited conditions [H]

COG id: COG1740

COG function: function code C; Ni,Fe-hydrogenase I small subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family [H]

Homologues:

Organism=Escherichia coli, GI1787206, Length=333, Percent_Identity=59.1591591591592, Blast_Score=426, Evalue=1e-120,
Organism=Escherichia coli, GI1789371, Length=334, Percent_Identity=42.5149700598802, Blast_Score=289, Evalue=3e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006137
- InterPro:   IPR001821
- InterPro:   IPR006311 [H]

Pfam domain/function: PF01058 Oxidored_q6 [H]

EC number: =1.12.99.6 [H]

Molecular weight: Translated: 39054; Mature: 39054

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKNQSFADIFRASGVSRRDFLKFCSLTSVYLGLSPSMVPSIVQAMETKPRTPVIWLHGL
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECC
ECTCCSESFIRSSHPTIEDIIFNMISLDYDDVLSAAAGHQLEDVRKKTMTDYKGKYILAV
CEEHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
EGNVSTKDDGVYCMVGGDSFLNTLRETAADAAAIIAWGACASFGCVQNADPNPTGAAPIS
ECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
EIIKDKPIVNVPGCPPIAEVMTGVITHFHTFGKLPDLDRFNRPKAFYKTRIHDKCYRRAF
HHHCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHH
FDAGMFVRSFDDESTRKGWCLYKMGCKGPTTYNSCSTIQWNDGTSFPIGSGHPCIGCSEP
HHCCHHEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
HFWDNGPFYKRLADVSFLGSDSNADRIGAVALGAAAAGAAAHATITAIKKGKSGKGNDKA
CCCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQKNQSFADIFRASGVSRRDFLKFCSLTSVYLGLSPSMVPSIVQAMETKPRTPVIWLHGL
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECC
ECTCCSESFIRSSHPTIEDIIFNMISLDYDDVLSAAAGHQLEDVRKKTMTDYKGKYILAV
CEEHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
EGNVSTKDDGVYCMVGGDSFLNTLRETAADAAAIIAWGACASFGCVQNADPNPTGAAPIS
ECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
EIIKDKPIVNVPGCPPIAEVMTGVITHFHTFGKLPDLDRFNRPKAFYKTRIHDKCYRRAF
HHHCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHH
FDAGMFVRSFDDESTRKGWCLYKMGCKGPTTYNSCSTIQWNDGTSFPIGSGHPCIGCSEP
HHCCHHEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
HFWDNGPFYKRLADVSFLGSDSNADRIGAVALGAAAAGAAAHATITAIKKGKSGKGNDKA
CCCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1383192; 12948488; 2493816 [H]