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The map label for this gene is ndhI [H]

Identifier: 119356794

GI number: 119356794

Start: 1106669

End: 1107355

Strand: Direct

Name: ndhI [H]

Synonym: Cpha266_0966

Alternate gene names: 119356794

Gene position: 1106669-1107355 (Clockwise)

Preceding gene: 119356793

Following gene: 119356795

Centisome position: 35.31

GC content: 50.22

Gene sequence:

>687_bases
ATGAGTGAATATTTCAGAAACATAAAGACAGGTGCCTCGACCATTGCTACCGGTATGGGGATTACCCTTCAGCACTTTTT
CAATGCCGTCAAGCGTAAGGGTGATGCCGGCGTGGGGGATTCGAATTATTTCGGGCAGGTTGACGGTCTCGTTACGCTCC
AGTATCCAAGAGAGGCGATCCCGACTCCGGCAAATGGACGGTATCGACTTGAGAATAATATTGATGATTGTATCGGTTGC
GCACAGTGTGAGCGTGCCTGTCCTATCGGTTGTATTACCATTGAAACCATCAAGGTTACGGCCGACGATCTCGGTGTTTG
TGGCAAGACATCCGGGGGACAGCAGAAAAAGTTCTGGCTTCCCGTCTTTGATATCGATACAGCCAAATGCATGACCTGCG
GCCTCTGTACGGTGGTCTGTCCAACGGAGTGCCTGATACACTCTCCGGTCAGCGATTTTTCTGAATTTGATCGTCAGAAT
CTTGTCTACCATTTTGGAAATCTGACGCGTCTTGAAGCCGAGGCAAAAAAACGCAAGCTTCAGGAACAGCAGGCTCAGGC
GGCAAAGGATAAAGCTGCGGCTCCTGCAAAACCTGTTCTTTCGGGCAAATCCGTCGCTGAGAAAACAGCGTCATCCGAAA
CAGAAGATAGCGGTAAAGCCAGGGGAGAGAACACAGGGGAACAGTAG

Upstream 100 bases:

>100_bases
ACCGTTCGCTTTTATCGGATTTGTTCTGACGGCGATCTGGGAAATTTATGTGCCATAGAAAGGGAAATTGCCGCAGTACG
GCAACCAATGAAGCAAGACT

Downstream 100 bases:

>100_bases
CCGTAAAGGATAAGCGAGTCGGCAGGATCATGAAAAACAATGCACCATAACCAATGAATGACAGTACCTTTACCATAATA
TTTTACCTCTTTGCCGCAAT

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase I subunit I; NDH-1 subunit I; NDH-I [H]

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSEYFRNIKTGASTIATGMGITLQHFFNAVKRKGDAGVGDSNYFGQVDGLVTLQYPREAIPTPANGRYRLENNIDDCIGC
AQCERACPIGCITIETIKVTADDLGVCGKTSGGQQKKFWLPVFDIDTAKCMTCGLCTVVCPTECLIHSPVSDFSEFDRQN
LVYHFGNLTRLEAEAKKRKLQEQQAQAAKDKAAAPAKPVLSGKSVAEKTASSETEDSGKARGENTGEQ

Sequences:

>Translated_228_residues
MSEYFRNIKTGASTIATGMGITLQHFFNAVKRKGDAGVGDSNYFGQVDGLVTLQYPREAIPTPANGRYRLENNIDDCIGC
AQCERACPIGCITIETIKVTADDLGVCGKTSGGQQKKFWLPVFDIDTAKCMTCGLCTVVCPTECLIHSPVSDFSEFDRQN
LVYHFGNLTRLEAEAKKRKLQEQQAQAAKDKAAAPAKPVLSGKSVAEKTASSETEDSGKARGENTGEQ
>Mature_227_residues
SEYFRNIKTGASTIATGMGITLQHFFNAVKRKGDAGVGDSNYFGQVDGLVTLQYPREAIPTPANGRYRLENNIDDCIGCA
QCERACPIGCITIETIKVTADDLGVCGKTSGGQQKKFWLPVFDIDTAKCMTCGLCTVVCPTECLIHSPVSDFSEFDRQNL
VYHFGNLTRLEAEAKKRKLQEQQAQAAKDKAAAPAKPVLSGKSVAEKTASSETEDSGKARGENTGEQ

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: COG1143

COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788617, Length=123, Percent_Identity=31.7073170731707, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012285
- InterPro:   IPR004497
- InterPro:   IPR010226 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: 1.6.5.3

Molecular weight: Translated: 24641; Mature: 24510

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEYFRNIKTGASTIATGMGITLQHFFNAVKRKGDAGVGDSNYFGQVDGLVTLQYPREAI
CHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHC
PTPANGRYRLENNIDDCIGCAQCERACPIGCITIETIKVTADDLGVCGKTSGGQQKKFWL
CCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEE
PVFDIDTAKCMTCGLCTVVCPTECLIHSPVSDFSEFDRQNLVYHFGNLTRLEAEAKKRKL
EEEECCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QEQQAQAAKDKAAAPAKPVLSGKSVAEKTASSETEDSGKARGENTGEQ
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEYFRNIKTGASTIATGMGITLQHFFNAVKRKGDAGVGDSNYFGQVDGLVTLQYPREAI
HHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHC
PTPANGRYRLENNIDDCIGCAQCERACPIGCITIETIKVTADDLGVCGKTSGGQQKKFWL
CCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEE
PVFDIDTAKCMTCGLCTVVCPTECLIHSPVSDFSEFDRQNLVYHFGNLTRLEAEAKKRKL
EEEECCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QEQQAQAAKDKAAAPAKPVLSGKSVAEKTASSETEDSGKARGENTGEQ
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA