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The map label for this gene is yhbQ [C]

Identifier: 118578983

GI number: 118578983

Start: 580563

End: 580823

Strand: Direct

Name: yhbQ [C]

Synonym: Ppro_0544

Alternate gene names: 118578983

Gene position: 580563-580823 (Clockwise)

Preceding gene: 118578982

Following gene: 118578985

Centisome position: 14.49

GC content: 62.07

Gene sequence:

>261_bases
GTGAACTGGCAGGTCTACATCATCCTCTGCTCCGACGACTCCCTCTACACCGGCATCACCACGGACATGGAGAGACGCTT
TCTCCAGCACGCACAGGGAAGGGGAGCCAAGTATTTTCGGGGACGCAAACCGCTGCGGGTGGTCTACCGGGAAGACGGCC
ACAGCCGCTCTTCAGCAGCCGGCAGGGAAGCCCGGATCAAGGCCATGAGCCGGCCGGACAAGCTGGGCCTGGTGTCGGAG
GACATCGAGAGAGCTGATTGA

Upstream 100 bases:

>100_bases
CCATAGCCGCCTACGATCAACCCCTGGTGGACGAACTGCTGGGCTTGGACGGGGACGAAGAGTTCGGCATCTACCTGGCG
CCGGTGGGGAAGGTCGCACG

Downstream 100 bases:

>100_bases
GCTGCTCCCTTGCTTTCGTTCAGATCGCCCCGGCTTTAACCTCTATGGCGCTCTCCAGGGTCGTATCCCCCACCGTCAGA
TAGATGGTCCCCTCGGTGAT

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MNWQVYIILCSDDSLYTGITTDMERRFLQHAQGRGAKYFRGRKPLRVVYREDGHSRSSAAGREARIKAMSRPDKLGLVSE
DIERAD

Sequences:

>Translated_86_residues
MNWQVYIILCSDDSLYTGITTDMERRFLQHAQGRGAKYFRGRKPLRVVYREDGHSRSSAAGREARIKAMSRPDKLGLVSE
DIERAD
>Mature_86_residues
MNWQVYIILCSDDSLYTGITTDMERRFLQHAQGRGAKYFRGRKPLRVVYREDGHSRSSAAGREARIKAMSRPDKLGLVSE
DIERAD

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=78, Percent_Identity=44.8717948717949, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 9904; Mature: 9904

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWQVYIILCSDDSLYTGITTDMERRFLQHAQGRGAKYFRGRKPLRVVYREDGHSRSSAA
CCEEEEEEEECCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCC
GREARIKAMSRPDKLGLVSEDIERAD
CCHHHHHCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MNWQVYIILCSDDSLYTGITTDMERRFLQHAQGRGAKYFRGRKPLRVVYREDGHSRSSAA
CCEEEEEEEECCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCC
GREARIKAMSRPDKLGLVSEDIERAD
CCHHHHHCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA