Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is ydjH [C]
Identifier: 118578873
GI number: 118578873
Start: 454040
End: 454957
Strand: Direct
Name: ydjH [C]
Synonym: Ppro_0432
Alternate gene names: 118578873
Gene position: 454040-454957 (Clockwise)
Preceding gene: 118578872
Following gene: 118578874
Centisome position: 11.33
GC content: 59.8
Gene sequence:
>918_bases ATGGGCATCGTTGTCGTCGGTACCGTGGCTTTTGACACGGTGGAAACCCCCTTTGGCAGGGGAGAGCATGTGCTGGGCGG GTCTGCTACCTATTTTTCCACCGCAGCCAGTTTTTTCAGCGATGTCTCGCTGGTGGCGGTGGTGGGCGAGGATTTTCCCG AGGAGCATGTGAGTTTTCTCCAGTCGCGCTCCATCGATACCGCCGGTCTGCAGCGCATTCCGGGCAAGACATTCCAGTGG AGCGGGAAGTACGGCTATGACCTGAACGAAGCCCAGACCCTGGACACCCAGTTGAACGTGCTGATGGAGTTCCGTCCCGA TCTGCCCGAAAGCTACCGCGACGCTGAGTACCTCTTCCTGGCCAATATCGATCCCGAGTTGCAGATGCAGGTGCTGGAGC AGGTGCGTTCCCCCCGGCTAGTGGCCTGCGATACCATGAACTTCTGGATATCCTCCAAGCCCGAGGCGCTGACGGAGGTG CTGCGCAAGGTGGATATCGTGGTCATCAACGAGGCAGAGGCGCGTCAGTTCACCTCGGAGGCAAACCTGGTCAAGGCGGC CCGCGCCATCATCTCCCTGGGGTGCAAACGTCTGGTAGTCAAGCGCGGAGAGTACGGCGTGCTGATGTTTACCGCCGATT CGGTTTTTGCCGCCCCGGCCTACCCCCTGGAGGAAGTTTTCGACCCCACCGGCGCTGGCGACACCTTTGCCGGCGGCTTC ATGGGGTACCTGGCCAATACCGGTGACCTGAGCGATGCCGGAATCCGCCAGGCGATCGTTTTCGGAAGCGTGATGGCGTC GTTCAACGTGGAGGACTTCAGTCTTGAGCGCATGAAGCGCCTGGAGTTTTGCGAGATCGAATCCCGCTTCAAGAGTTTCA AGGCATTAACCAGCTTCCGCGACATCGCGTCCCTGTAG
Upstream 100 bases:
>100_bases ACCGACAGAAGCGTCATACCGGCGGAGACGAGGCGCAAGCTTGACCTGATCGTCGGCAAGTATCTGTAGTACCTAATCAC CTGACAGGAGAGGAGTATTC
Downstream 100 bases:
>100_bases CCCTAACTCCTGTGGTTCATTGACAATGAAGGCTGGATTTGATAGCGTTCGCCCGTTACGCAGAGAGGGTACTTCAACCA GATCGGCCCAGTATGAGATT
Product: ribokinase-like domain-containing protein
Products: NA
Alternate protein names: Carbohydrate Kinase; Ribokinase-Like Domain-Containing Protein; PfkB Domain-Containing Protein; PfkB Family Carbohydrate Kinase; Ribokinase; Carbohydrate Kinase PfkB Family Protein; ATP-Dependent 6-Phosphofructokinase; Cytidine Kinase; Pfkb Domain Protein; Carbohydrate/Pyrimidine Kinase PfkB Family; Carbohydrate Kinase PfkB Family; Ribokinase Family Sugar Kinase; Carbohydrate/Pyrimidine Kinase; PfkB Family Protein; Ribokinase Family; Ribokinase-Like Protein; Sugar Kinases Ribokinase Family; ATP-Dependent Phosphofructokinase; Kinase Pfkb Family; Carbohydrate Kinase PfkB/Ribokinase Family; PfkB Family Kinase; Carbohydrate/Purine Kinase; Kinase PfkB Family; Carbohydrate Kinase PfkB
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MGIVVVGTVAFDTVETPFGRGEHVLGGSATYFSTAASFFSDVSLVAVVGEDFPEEHVSFLQSRSIDTAGLQRIPGKTFQW SGKYGYDLNEAQTLDTQLNVLMEFRPDLPESYRDAEYLFLANIDPELQMQVLEQVRSPRLVACDTMNFWISSKPEALTEV LRKVDIVVINEAEARQFTSEANLVKAARAIISLGCKRLVVKRGEYGVLMFTADSVFAAPAYPLEEVFDPTGAGDTFAGGF MGYLANTGDLSDAGIRQAIVFGSVMASFNVEDFSLERMKRLEFCEIESRFKSFKALTSFRDIASL
Sequences:
>Translated_305_residues MGIVVVGTVAFDTVETPFGRGEHVLGGSATYFSTAASFFSDVSLVAVVGEDFPEEHVSFLQSRSIDTAGLQRIPGKTFQW SGKYGYDLNEAQTLDTQLNVLMEFRPDLPESYRDAEYLFLANIDPELQMQVLEQVRSPRLVACDTMNFWISSKPEALTEV LRKVDIVVINEAEARQFTSEANLVKAARAIISLGCKRLVVKRGEYGVLMFTADSVFAAPAYPLEEVFDPTGAGDTFAGGF MGYLANTGDLSDAGIRQAIVFGSVMASFNVEDFSLERMKRLEFCEIESRFKSFKALTSFRDIASL >Mature_304_residues GIVVVGTVAFDTVETPFGRGEHVLGGSATYFSTAASFFSDVSLVAVVGEDFPEEHVSFLQSRSIDTAGLQRIPGKTFQWS GKYGYDLNEAQTLDTQLNVLMEFRPDLPESYRDAEYLFLANIDPELQMQVLEQVRSPRLVACDTMNFWISSKPEALTEVL RKVDIVVINEAEARQFTSEANLVKAARAIISLGCKRLVVKRGEYGVLMFTADSVFAAPAYPLEEVFDPTGAGDTFAGGFM GYLANTGDLSDAGIRQAIVFGSVMASFNVEDFSLERMKRLEFCEIESRFKSFKALTSFRDIASL
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33659; Mature: 33527
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIVVVGTVAFDTVETPFGRGEHVLGGSATYFSTAASFFSDVSLVAVVGEDFPEEHVSFL CCEEEEEEEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH QSRSIDTAGLQRIPGKTFQWSGKYGYDLNEAQTLDTQLNVLMEFRPDLPESYRDAEYLFL HHCCCCHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE ANIDPELQMQVLEQVRSPRLVACDTMNFWISSKPEALTEVLRKVDIVVINEAEARQFTSE ECCCHHHHHHHHHHHCCCCEEEEECEEEECCCCCHHHHHHHHHCCEEEECCHHHHHHHHH ANLVKAARAIISLGCKRLVVKRGEYGVLMFTADSVFAAPAYPLEEVFDPTGAGDTFAGGF HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCCCCHHHHCCCCCCCCCHHHHH MGYLANTGDLSDAGIRQAIVFGSVMASFNVEDFSLERMKRLEFCEIESRFKSFKALTSFR HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIASL HHHCC >Mature Secondary Structure GIVVVGTVAFDTVETPFGRGEHVLGGSATYFSTAASFFSDVSLVAVVGEDFPEEHVSFL CEEEEEEEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH QSRSIDTAGLQRIPGKTFQWSGKYGYDLNEAQTLDTQLNVLMEFRPDLPESYRDAEYLFL HHCCCCHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE ANIDPELQMQVLEQVRSPRLVACDTMNFWISSKPEALTEVLRKVDIVVINEAEARQFTSE ECCCHHHHHHHHHHHCCCCEEEEECEEEECCCCCHHHHHHHHHCCEEEECCHHHHHHHHH ANLVKAARAIISLGCKRLVVKRGEYGVLMFTADSVFAAPAYPLEEVFDPTGAGDTFAGGF HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCCCCHHHHCCCCCCCCCHHHHH MGYLANTGDLSDAGIRQAIVFGSVMASFNVEDFSLERMKRLEFCEIESRFKSFKALTSFR HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIASL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA