Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is 118578632
Identifier: 118578632
GI number: 118578632
Start: 189398
End: 190786
Strand: Direct
Name: 118578632
Synonym: Ppro_0188
Alternate gene names: NA
Gene position: 189398-190786 (Clockwise)
Preceding gene: 118578631
Following gene: 118578637
Centisome position: 4.73
GC content: 51.91
Gene sequence:
>1389_bases ATGAACCGGATTTTACCAGAGATCGCAACAGTTGAGAACCAGATAAACCTGTTCTTTCACAATCATAAACTTGGCGAACT TCTTCGACAAAGCAACGTCAGAAAAGATAAGGGCGTTTCTCTGGACATTCTGTTCCAGTTTTTGCTGACAATGGCCTTTA CCGGAAAGAACCTGTTTCGCTTGTTGAACACGCCTGATACTCCTGACATACCGCCAGGCATCAGTAAAGACGTTGTCTAT CGTTTTTTGAACTGCATCTCTTCCAACTGGCGCAAGTTTCTGTTTCTGCTCAGCACCAGAGTCATACTCCAGAAACTTTT ACCGTTGACGGACGATGCCACCACCAAGGTACTGATTGCCGACGACACCCTGTATCTCCGTGATCGCAGCAAATGCGTGG AGCTTTTGGCCCGGGTCCATGACCACAACACCAAGAGATATCACCGGGGCTTCAGAATGCTCACCCTGGGGTGGTCGGAT GGCAACAGTTTCGTGCCCATGCTCTTCTCCATGCTGAGCTCCTCGAAGGAAAAGAACCGCCTTGCCGCAATGCGCACTGA CCTCGACAAGCGCACCAATGGCTACAAGCGCCGGCAGGAAAGCGTGAATAAATCTCCGGATGTGCTGGTGGAACTGGTAA AGGTGGCCATGGCCGCCGGCTCCAAGGCGCGCTATCTGCTGTTTGACAGTTGGTTTGCCTTTCCCGTCACCATCAGGCGT ATCCATGCTTTGGGAATGCACACCATCTGCATGCTCAAGGACTCGAAAACCCGCTATACCTTCCAGGGAGATGGCATGCC CCTGAAGGAATTGTTTAAATGGGTCCGCAAGCGGCCGGGACGGGCCAAGGTCCTGGCTTCTGTCATGGTGACCATTGGCG AGGATGACAAGGGCAATCCTGTTGCGGCAAAGATCGTGTTCGTACGAGACAGAAGCAAAAAGAGCTGGCTTGCACTTCTT TCAACCGACACCACGTTGGCGGACGAAGAGATCATCAAGCTCTACGGGCGGCGCTGGGATATCGAGGTGTTCTTCAAGAT GAGCAAGTCGTTTCTGAATCTGGCAAAAGAGTGTCAGGGCCGCTCCTTCGATGCCTTGGTTGCCCATACGACGGTGGTGT TCTGCCGCTACATCATGCTGGAACTCGCCAGAAGAACGAATGCCGACCCGCGAACCCTCGGAAACCTGTTCCATGCCACC TGCGATGAACTCAGGCAAACGAGCTTCGTCGAAGCGCTGGCATTACTACTGAAGTTGCTTGAACAGTCACTGAACAAACT TGCTGGATTTACCAAGGAACTGATGCTGCAACTGGTTGAGCAGTTTGTTGCACAACTGCCATTGCCTTTTAAGGCAAGGA TGTTACTTTCTGCCTTGGCAACCCAGTAA
Upstream 100 bases:
>100_bases AAAAGCGTAACCTGCTGTAATTATAAATAGAATAGCGTCGCAATCTGTATTAATATGGCTTTGCTCCCCAGCAAATCCAA TAACGCAGAAAGGCGACGCT
Downstream 100 bases:
>100_bases ACCGACAGCATCTCAGGCGGTTACTAACAAATAGCCTGCTGCGAAAGTTGAGTTTATTGATAAGGTACAGCCATGAACTT TTTTTGCGCTACTTGTAAAA
Product: transposase, IS4 family protein
Products: NA
Alternate protein names: Transposase; Transposase Dde Domain; LOW QUALITY PROTEIN Transposase IS4 Family Protein; IS4-Like Transposase
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MNRILPEIATVENQINLFFHNHKLGELLRQSNVRKDKGVSLDILFQFLLTMAFTGKNLFRLLNTPDTPDIPPGISKDVVY RFLNCISSNWRKFLFLLSTRVILQKLLPLTDDATTKVLIADDTLYLRDRSKCVELLARVHDHNTKRYHRGFRMLTLGWSD GNSFVPMLFSMLSSSKEKNRLAAMRTDLDKRTNGYKRRQESVNKSPDVLVELVKVAMAAGSKARYLLFDSWFAFPVTIRR IHALGMHTICMLKDSKTRYTFQGDGMPLKELFKWVRKRPGRAKVLASVMVTIGEDDKGNPVAAKIVFVRDRSKKSWLALL STDTTLADEEIIKLYGRRWDIEVFFKMSKSFLNLAKECQGRSFDALVAHTTVVFCRYIMLELARRTNADPRTLGNLFHAT CDELRQTSFVEALALLLKLLEQSLNKLAGFTKELMLQLVEQFVAQLPLPFKARMLLSALATQ
Sequences:
>Translated_462_residues MNRILPEIATVENQINLFFHNHKLGELLRQSNVRKDKGVSLDILFQFLLTMAFTGKNLFRLLNTPDTPDIPPGISKDVVY RFLNCISSNWRKFLFLLSTRVILQKLLPLTDDATTKVLIADDTLYLRDRSKCVELLARVHDHNTKRYHRGFRMLTLGWSD GNSFVPMLFSMLSSSKEKNRLAAMRTDLDKRTNGYKRRQESVNKSPDVLVELVKVAMAAGSKARYLLFDSWFAFPVTIRR IHALGMHTICMLKDSKTRYTFQGDGMPLKELFKWVRKRPGRAKVLASVMVTIGEDDKGNPVAAKIVFVRDRSKKSWLALL STDTTLADEEIIKLYGRRWDIEVFFKMSKSFLNLAKECQGRSFDALVAHTTVVFCRYIMLELARRTNADPRTLGNLFHAT CDELRQTSFVEALALLLKLLEQSLNKLAGFTKELMLQLVEQFVAQLPLPFKARMLLSALATQ >Mature_462_residues MNRILPEIATVENQINLFFHNHKLGELLRQSNVRKDKGVSLDILFQFLLTMAFTGKNLFRLLNTPDTPDIPPGISKDVVY RFLNCISSNWRKFLFLLSTRVILQKLLPLTDDATTKVLIADDTLYLRDRSKCVELLARVHDHNTKRYHRGFRMLTLGWSD GNSFVPMLFSMLSSSKEKNRLAAMRTDLDKRTNGYKRRQESVNKSPDVLVELVKVAMAAGSKARYLLFDSWFAFPVTIRR IHALGMHTICMLKDSKTRYTFQGDGMPLKELFKWVRKRPGRAKVLASVMVTIGEDDKGNPVAAKIVFVRDRSKKSWLALL STDTTLADEEIIKLYGRRWDIEVFFKMSKSFLNLAKECQGRSFDALVAHTTVVFCRYIMLELARRTNADPRTLGNLFHAT CDELRQTSFVEALALLLKLLEQSLNKLAGFTKELMLQLVEQFVAQLPLPFKARMLLSALATQ
Specific function: Unknown
COG id: COG3385
COG function: function code L; FOG: Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52992; Mature: 52992
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRILPEIATVENQINLFFHNHKLGELLRQSNVRKDKGVSLDILFQFLLTMAFTGKNLFR CCCCHHHHHHHHHHEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH LLNTPDTPDIPPGISKDVVYRFLNCISSNWRKFLFLLSTRVILQKLLPLTDDATTKVLIA HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE DDTLYLRDRSKCVELLARVHDHNTKRYHRGFRMLTLGWSDGNSFVPMLFSMLSSSKEKNR CCEEEEHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHH LAAMRTDLDKRTNGYKRRQESVNKSPDVLVELVKVAMAAGSKARYLLFDSWFAFPVTIRR HHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHH IHALGMHTICMLKDSKTRYTFQGDGMPLKELFKWVRKRPGRAKVLASVMVTIGEDDKGNP HHHHHHHEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC VAAKIVFVRDRSKKSWLALLSTDTTLADEEIIKLYGRRWDIEVFFKMSKSFLNLAKECQG EEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC RSFDALVAHTTVVFCRYIMLELARRTNADPRTLGNLFHATCDELRQTSFVEALALLLKLL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQSLNKLAGFTKELMLQLVEQFVAQLPLPFKARMLLSALATQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MNRILPEIATVENQINLFFHNHKLGELLRQSNVRKDKGVSLDILFQFLLTMAFTGKNLFR CCCCHHHHHHHHHHEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH LLNTPDTPDIPPGISKDVVYRFLNCISSNWRKFLFLLSTRVILQKLLPLTDDATTKVLIA HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE DDTLYLRDRSKCVELLARVHDHNTKRYHRGFRMLTLGWSDGNSFVPMLFSMLSSSKEKNR CCEEEEHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHH LAAMRTDLDKRTNGYKRRQESVNKSPDVLVELVKVAMAAGSKARYLLFDSWFAFPVTIRR HHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHH IHALGMHTICMLKDSKTRYTFQGDGMPLKELFKWVRKRPGRAKVLASVMVTIGEDDKGNP HHHHHHHEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC VAAKIVFVRDRSKKSWLALLSTDTTLADEEIIKLYGRRWDIEVFFKMSKSFLNLAKECQG EEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC RSFDALVAHTTVVFCRYIMLELARRTNADPRTLGNLFHATCDELRQTSFVEALALLLKLL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQSLNKLAGFTKELMLQLVEQFVAQLPLPFKARMLLSALATQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA