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The map label for this gene is iagB [H]

Identifier: 118578637

GI number: 118578637

Start: 193835

End: 194341

Strand: Direct

Name: iagB [H]

Synonym: Ppro_0193

Alternate gene names: 118578637

Gene position: 193835-194341 (Clockwise)

Preceding gene: 118578632

Following gene: 118578638

Centisome position: 4.84

GC content: 56.8

Gene sequence:

>507_bases
ATGCGCCGATTACCGGGAATCTGCCTGTTCATCATCAGTCTTGCCTGTCTGCCGGTGCATGCTGGTGCCTTCTGCTTCGA
GGAAGCCGGAAGCCTCTACGGCATCTCACCCCAACTGCTCTGGAGCATTGCCAAGACGGAAAGCAACTTCAATCCCGGGG
CAATTAACCGGAACAGCAACGGCACCTACGATTACGGCCTCATGCAAATCAATTCGAGTTGGGCCAAGCGACTTGGCAAG
ACCTGGAATGATTTGGGCGAGCCATGCACGAACGTGAAAGTGGGAGCCTGGGTCCTGGCCCAGTGCATCCAGGACTATGG
TTACACCTGGCGAGCTGTCGGTTGTTACAACTCGCGTACTCCGTCGAAAGGTGACCGTTATGCCGGCAAGGTCTATCGGG
TTCTTGTGGGGTACGCCAGGCCGCAGGCAATGACGATCGTTGCCGCCAACAGCACACCCAGGATCGAATCACCATGGGAT
GAGGTGTTCGGCAATGCTGTCCGCTGA

Upstream 100 bases:

>100_bases
CCACATAGTGTCCATATGAACACTATATACCCTTGCCCACACCTTCTTGTCAAGACGCTGCACCTTCCCCCCTGCAAGAT
TATCAGTCAGGAGGAATTGA

Downstream 100 bases:

>100_bases
TCTTCTCCACAAATACGGATTGCCGGAGGACGAGATAGTCGATGCTGTTGAATGCGCTGTGGCAAGGACACTGATGGCAG
CTTTTAAAAGGACGGTTACA

Product: lytic transglycosylase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MRRLPGICLFIISLACLPVHAGAFCFEEAGSLYGISPQLLWSIAKTESNFNPGAINRNSNGTYDYGLMQINSSWAKRLGK
TWNDLGEPCTNVKVGAWVLAQCIQDYGYTWRAVGCYNSRTPSKGDRYAGKVYRVLVGYARPQAMTIVAANSTPRIESPWD
EVFGNAVR

Sequences:

>Translated_168_residues
MRRLPGICLFIISLACLPVHAGAFCFEEAGSLYGISPQLLWSIAKTESNFNPGAINRNSNGTYDYGLMQINSSWAKRLGK
TWNDLGEPCTNVKVGAWVLAQCIQDYGYTWRAVGCYNSRTPSKGDRYAGKVYRVLVGYARPQAMTIVAANSTPRIESPWD
EVFGNAVR
>Mature_168_residues
MRRLPGICLFIISLACLPVHAGAFCFEEAGSLYGISPQLLWSIAKTESNFNPGAINRNSNGTYDYGLMQINSSWAKRLGK
TWNDLGEPCTNVKVGAWVLAQCIQDYGYTWRAVGCYNSRTPSKGDRYAGKVYRVLVGYARPQAMTIVAANSTPRIESPWD
EVFGNAVR

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iagB/ipgF/P19 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 18580; Mature: 18580

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLPGICLFIISLACLPVHAGAFCFEEAGSLYGISPQLLWSIAKTESNFNPGAINRNSN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
GTYDYGLMQINSSWAKRLGKTWNDLGEPCTNVKVGAWVLAQCIQDYGYTWRAVGCYNSRT
CCEEEEEEEECHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC
PSKGDRYAGKVYRVLVGYARPQAMTIVAANSTPRIESPWDEVFGNAVR
CCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MRRLPGICLFIISLACLPVHAGAFCFEEAGSLYGISPQLLWSIAKTESNFNPGAINRNSN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
GTYDYGLMQINSSWAKRLGKTWNDLGEPCTNVKVGAWVLAQCIQDYGYTWRAVGCYNSRT
CCEEEEEEEECHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC
PSKGDRYAGKVYRVLVGYARPQAMTIVAANSTPRIESPWDEVFGNAVR
CCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7754225; 11677608; 12644504 [H]