Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is 118578617
Identifier: 118578617
GI number: 118578617
Start: 178379
End: 179221
Strand: Direct
Name: 118578617
Synonym: Ppro_0173
Alternate gene names: NA
Gene position: 178379-179221 (Clockwise)
Preceding gene: 118578616
Following gene: 118578619
Centisome position: 4.45
GC content: 58.96
Gene sequence:
>843_bases ATGAAAACGGCTAGCGAGGGACATTGCCAGCTTGACCACAATGTGCTCAAGCAACTTACGGAGGAGTTGAAGTTTGCCGC CTCGCACATGGACGGAAAGGAGTGGCGGGCGCTCCTGGCTGCGGCCCTTGCCAAGTCGGCGCGGGAAACGTGCAGGAGCA AATACGAGGGACTCAAGGGGCTAGGGCGGCTGGGGCGGGATGGGTGGCGAAAAATTCGTACCGACGGTCTGGCGGAGACC GGCAGGGAACTGACGGCAAGAGCGAAAGAAGCGCTTGACTCCCTTCCTCATCGGGCAAAGGAAACTGTCTTGCGTCTGTA CCAGCTCTCCCCGGCTGAGCTTTGCGACGAACTCGTTCCCTTCATCATTGGCCTCATCGTATGTTACGCCTCCGCTGGCG GCCTTGACCTGGAAGGGGGGCTACCTGACACCGACCTTGAGCTGGGGATCGGCATGCACCGCAACATCTTCTCGCATTCC GTGTTCATTGGCTTCACCTGCGAGGGGGTGTTACGTTTCGGTGTGGAAGTTCTTTCCGGCCTCCATGGAAAGCTCCCCGC TGAACATCATGCTGTCTGGGACAACGCGCACCGGCATATCAAGAAATGCGAGAGCAGCGCCATCACCGGTCTCTGGGTTG GCATCTGCCTCCACTTCATCAAGGACGCCGGGCTCTTCTCCCATGCAACAAAACCATACACCGGGCTTCCCGGACAGCAC AACATGGCCTTCCACCAGGGGCTCCTCGCGGGCAACGGAGCTGCATCAGGGGTGACGGGCACATCACAGGCGTTTTCAGG CAAATCAGGACATCTCAGAAAAGGGTCAAGCGGGGAAGCATAA
Upstream 100 bases:
>100_bases GAAAAGAGATCGAACAGAAGGTTATGCAGAGTCTCTCATTGGTAGAGAAAGACAGTCATCCCCAACGGCTGACAGCAGGT GTAACCATCTGGAGCAGCAA
Downstream 100 bases:
>100_bases TGAAAAAAGCCGCTCTTGCCATCGTCGCTGTGATCAGCTTCGTGGTAATGATGATCTGTCTTTTCTCCGGTGGGCACATC AGGCTGTTTGGCGTTCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKTASEGHCQLDHNVLKQLTEELKFAASHMDGKEWRALLAAALAKSARETCRSKYEGLKGLGRLGRDGWRKIRTDGLAET GRELTARAKEALDSLPHRAKETVLRLYQLSPAELCDELVPFIIGLIVCYASAGGLDLEGGLPDTDLELGIGMHRNIFSHS VFIGFTCEGVLRFGVEVLSGLHGKLPAEHHAVWDNAHRHIKKCESSAITGLWVGICLHFIKDAGLFSHATKPYTGLPGQH NMAFHQGLLAGNGAASGVTGTSQAFSGKSGHLRKGSSGEA
Sequences:
>Translated_280_residues MKTASEGHCQLDHNVLKQLTEELKFAASHMDGKEWRALLAAALAKSARETCRSKYEGLKGLGRLGRDGWRKIRTDGLAET GRELTARAKEALDSLPHRAKETVLRLYQLSPAELCDELVPFIIGLIVCYASAGGLDLEGGLPDTDLELGIGMHRNIFSHS VFIGFTCEGVLRFGVEVLSGLHGKLPAEHHAVWDNAHRHIKKCESSAITGLWVGICLHFIKDAGLFSHATKPYTGLPGQH NMAFHQGLLAGNGAASGVTGTSQAFSGKSGHLRKGSSGEA >Mature_280_residues MKTASEGHCQLDHNVLKQLTEELKFAASHMDGKEWRALLAAALAKSARETCRSKYEGLKGLGRLGRDGWRKIRTDGLAET GRELTARAKEALDSLPHRAKETVLRLYQLSPAELCDELVPFIIGLIVCYASAGGLDLEGGLPDTDLELGIGMHRNIFSHS VFIGFTCEGVLRFGVEVLSGLHGKLPAEHHAVWDNAHRHIKKCESSAITGLWVGICLHFIKDAGLFSHATKPYTGLPGQH NMAFHQGLLAGNGAASGVTGTSQAFSGKSGHLRKGSSGEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30126; Mature: 30126
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTASEGHCQLDHNVLKQLTEELKFAASHMDGKEWRALLAAALAKSARETCRSKYEGLKG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGRLGRDGWRKIRTDGLAETGRELTARAKEALDSLPHRAKETVLRLYQLSPAELCDELVP HHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHH FIIGLIVCYASAGGLDLEGGLPDTDLELGIGMHRNIFSHSVFIGFTCEGVLRFGVEVLSG HHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCEEEEEHHHHHHHHHHHHHHH LHGKLPAEHHAVWDNAHRHIKKCESSAITGLWVGICLHFIKDAGLFSHATKPYTGLPGQH HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC NMAFHQGLLAGNGAASGVTGTSQAFSGKSGHLRKGSSGEA CHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKTASEGHCQLDHNVLKQLTEELKFAASHMDGKEWRALLAAALAKSARETCRSKYEGLKG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGRLGRDGWRKIRTDGLAETGRELTARAKEALDSLPHRAKETVLRLYQLSPAELCDELVP HHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHH FIIGLIVCYASAGGLDLEGGLPDTDLELGIGMHRNIFSHSVFIGFTCEGVLRFGVEVLSG HHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCEEEEEHHHHHHHHHHHHHHH LHGKLPAEHHAVWDNAHRHIKKCESSAITGLWVGICLHFIKDAGLFSHATKPYTGLPGQH HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC NMAFHQGLLAGNGAASGVTGTSQAFSGKSGHLRKGSSGEA CHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA