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The map label for this gene is ywbD [H]

Identifier: 118479690

GI number: 118479690

Start: 4339108

End: 4340352

Strand: Reverse

Name: ywbD [H]

Synonym: BALH_4124

Alternate gene names: 118479690

Gene position: 4340352-4339108 (Counterclockwise)

Preceding gene: 118479691

Following gene: 118479688

Centisome position: 82.56

GC content: 34.14

Gene sequence:

>1245_bases
GTGCTTCCTATAAAGAAAGCATGCAAATGGAAAGGAAGTTTTTATATGCGATCAGAAGTAACTGTAAAAATAAAACCGAA
ATTTATAAAAGAAATTAAAAGTGGATATCCGCTTATTTTAAAAGATGCGATTCAAAATTTAAATGATGTTCAGGAAGAAG
GAACAATCATTAAAGTGGTAGATGAGAAGAACCACTTTGTCGGAAAAGGTTATTATGGAAAACAAAATAAAGGATACGGT
TGGATTTTAACGAGAAAAGAGAGTGAACAAATTAATCAATCTTTCTTTGAAAGTAAAATAAAATCTGCCTTACATAAACG
AAAGCAATTTTACAAATCAAGTGATACGACAGCATTCCGCGCCCTAAACGGTGAAGGTGATGGTCTTGGTGGCTTAATCA
TCGATTATTATGACGGTTATTATGTAGTGAGCTGGTATAGCGAAGGGATTTATACTTTCAGAGATGAGATTATAGCTGCT
CTCCAAAAAGTAGCAAACTTTAAAGGTATTTATGAGAAGAAGCGTTTTGATACGAAAGGGAAATACATTGAAGGCGATGA
TTTCGTAGCAGGAGAGCGCGGTGAGTTCCCGCTTATCGTAAAAGAGAATGGTGTGAACTTCGCTGTTTATTTAAATGACG
GAGCGATGGTTGGTGTCTTTTTAGATCAACGTAACGTGCGAAAACAAATTCGTGATAAATATGCGAAGGGAAGAACCGTG
TTAAATATGTTCTCTTATACAGGGGCTTTTTCTGTATTTGCAGCGCTTGGCGGAGCAAGCAAAACGACGAGTGTCGACCT
TGCAAATCGTAGTTTAAGTAAAACGATTGAGCAGTTTAGTGTAAATGAAGTTGATTATGAAGCGCAAGATATTATTGTAG
AAGATGTATTCCTTTACTTTAAATATGCAGCGAAGAAAAAGATGAAGTTCGATATGGTTGTCTTAGACCCTCCAAGCTTT
GCACGCTCGAAAAAATATACATTTAGTGCAGCAAAAGATTATAAAAATTTATTAAAAGAAACAATTGCCATTACAGAAAA
TAACGGTATTATCGTTGCTTCTACAAATTGTAGTGCATTCGATATGAAAAAGTTTAAAGGCTTTATTGATACAGCATTTA
AAGAAATGAATGGTAAATATAAAGTATTAGAAGAACATTCTTTACCAGAAGATTTCCGTACAATCGATCAATTTAAAGAA
GGAGACTATTTAAAAGTAGTTTTCATCGAGAAAATTAAAGGGTAA

Upstream 100 bases:

>100_bases
ATAAATATATAGCTGTTATGCCAGGGGATGAGCTAGTTGTACTAGCAAAGCAATAATATGGTATAGTGAAACGAGGCTGT
TTTTCAGTCTCGTTTTTTAA

Downstream 100 bases:

>100_bases
TAAAGAAAAAGGAGCTCGAGTTTACTTGAGCTCCTTTTCTTATTGAACGATATTTTGTACTCTACCGACTTGCCCGTCCT
GCAATCGAACTTTAATGCCA

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MLPIKKACKWKGSFYMRSEVTVKIKPKFIKEIKSGYPLILKDAIQNLNDVQEEGTIIKVVDEKNHFVGKGYYGKQNKGYG
WILTRKESEQINQSFFESKIKSALHKRKQFYKSSDTTAFRALNGEGDGLGGLIIDYYDGYYVVSWYSEGIYTFRDEIIAA
LQKVANFKGIYEKKRFDTKGKYIEGDDFVAGERGEFPLIVKENGVNFAVYLNDGAMVGVFLDQRNVRKQIRDKYAKGRTV
LNMFSYTGAFSVFAALGGASKTTSVDLANRSLSKTIEQFSVNEVDYEAQDIIVEDVFLYFKYAAKKKMKFDMVVLDPPSF
ARSKKYTFSAAKDYKNLLKETIAITENNGIIVASTNCSAFDMKKFKGFIDTAFKEMNGKYKVLEEHSLPEDFRTIDQFKE
GDYLKVVFIEKIKG

Sequences:

>Translated_414_residues
MLPIKKACKWKGSFYMRSEVTVKIKPKFIKEIKSGYPLILKDAIQNLNDVQEEGTIIKVVDEKNHFVGKGYYGKQNKGYG
WILTRKESEQINQSFFESKIKSALHKRKQFYKSSDTTAFRALNGEGDGLGGLIIDYYDGYYVVSWYSEGIYTFRDEIIAA
LQKVANFKGIYEKKRFDTKGKYIEGDDFVAGERGEFPLIVKENGVNFAVYLNDGAMVGVFLDQRNVRKQIRDKYAKGRTV
LNMFSYTGAFSVFAALGGASKTTSVDLANRSLSKTIEQFSVNEVDYEAQDIIVEDVFLYFKYAAKKKMKFDMVVLDPPSF
ARSKKYTFSAAKDYKNLLKETIAITENNGIIVASTNCSAFDMKKFKGFIDTAFKEMNGKYKVLEEHSLPEDFRTIDQFKE
GDYLKVVFIEKIKG
>Mature_414_residues
MLPIKKACKWKGSFYMRSEVTVKIKPKFIKEIKSGYPLILKDAIQNLNDVQEEGTIIKVVDEKNHFVGKGYYGKQNKGYG
WILTRKESEQINQSFFESKIKSALHKRKQFYKSSDTTAFRALNGEGDGLGGLIIDYYDGYYVVSWYSEGIYTFRDEIIAA
LQKVANFKGIYEKKRFDTKGKYIEGDDFVAGERGEFPLIVKENGVNFAVYLNDGAMVGVFLDQRNVRKQIRDKYAKGRTV
LNMFSYTGAFSVFAALGGASKTTSVDLANRSLSKTIEQFSVNEVDYEAQDIIVEDVFLYFKYAAKKKMKFDMVVLDPPSF
ARSKKYTFSAAKDYKNLLKETIAITENNGIIVASTNCSAFDMKKFKGFIDTAFKEMNGKYKVLEEHSLPEDFRTIDQFKE
GDYLKVVFIEKIKG

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=380, Percent_Identity=27.8947368421053, Blast_Score=167, Evalue=9e-43,
Organism=Escherichia coli, GI1787181, Length=174, Percent_Identity=34.4827586206897, Blast_Score=100, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 47302; Mature: 47302

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50890 PUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPIKKACKWKGSFYMRSEVTVKIKPKFIKEIKSGYPLILKDAIQNLNDVQEEGTIIKVV
CCCCCHHHCCCCCEEEEEEEEEEECHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCEEEEE
DEKNHFVGKGYYGKQNKGYGWILTRKESEQINQSFFESKIKSALHKRKQFYKSSDTTAFR
ECCCCEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
ALNGEGDGLGGLIIDYYDGYYVVSWYSEGIYTFRDEIIAALQKVANFKGIYEKKRFDTKG
EECCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KYIEGDDFVAGERGEFPLIVKENGVNFAVYLNDGAMVGVFLDQRNVRKQIRDKYAKGRTV
CEECCCCEECCCCCCCEEEEEECCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHCCCHH
LNMFSYTGAFSVFAALGGASKTTSVDLANRSLSKTIEQFSVNEVDYEAQDIIVEDVFLYF
HHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
KYAAKKKMKFDMVVLDPPSFARSKKYTFSAAKDYKNLLKETIAITENNGIIVASTNCSAF
HHHHCCCCEEEEEEECCCCHHCCCCEEEHHHHHHHHHHHHHHEEECCCCEEEEECCCCHH
DMKKFKGFIDTAFKEMNGKYKVLEEHSLPEDFRTIDQFKEGDYLKVVFIEKIKG
HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEEEECCC
>Mature Secondary Structure
MLPIKKACKWKGSFYMRSEVTVKIKPKFIKEIKSGYPLILKDAIQNLNDVQEEGTIIKVV
CCCCCHHHCCCCCEEEEEEEEEEECHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCEEEEE
DEKNHFVGKGYYGKQNKGYGWILTRKESEQINQSFFESKIKSALHKRKQFYKSSDTTAFR
ECCCCEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
ALNGEGDGLGGLIIDYYDGYYVVSWYSEGIYTFRDEIIAALQKVANFKGIYEKKRFDTKG
EECCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KYIEGDDFVAGERGEFPLIVKENGVNFAVYLNDGAMVGVFLDQRNVRKQIRDKYAKGRTV
CEECCCCEECCCCCCCEEEEEECCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHCCCHH
LNMFSYTGAFSVFAALGGASKTTSVDLANRSLSKTIEQFSVNEVDYEAQDIIVEDVFLYF
HHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
KYAAKKKMKFDMVVLDPPSFARSKKYTFSAAKDYKNLLKETIAITENNGIIVASTNCSAF
HHHHCCCCEEEEEEECCCCHHCCCCEEEHHHHHHHHHHHHHHEEECCCCEEEEECCCCHH
DMKKFKGFIDTAFKEMNGKYKVLEEHSLPEDFRTIDQFKEGDYLKVVFIEKIKG
HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]