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The map label for this gene is gerIB [H]

Identifier: 118478432

GI number: 118478432

Start: 2959108

End: 2960214

Strand: Reverse

Name: gerIB [H]

Synonym: BALH_2800

Alternate gene names: 118478432

Gene position: 2960214-2959108 (Counterclockwise)

Preceding gene: 118478433

Following gene: 118478431

Centisome position: 56.31

GC content: 32.52

Gene sequence:

>1107_bases
TTGAAATTAACAGGGAGGAGCATTATGAAACAGGTCCCAATTGAGTATCAAGTCTCTCCATATATGGTATTTTTTTTAAT
TATTACTATACAGATGGGGGTTGGTATGCTTGGTTTTGAAAGGATTAGTGCAAAATTAGTTGGAAATGATGCGTGGATAA
GTACGCTACTTTTTGGAATATCTGTTAATCTTATGATTTGGATCATATATCAGATTTTAAATCAGGGTAATGGAGATATC
ATTGCAATCAATCAAAACGTGTTTGGGAAATGGATTGGTGGAATGTTCAACTTCATTTTTTTATCCTATATTGTATTGTT
GGGTGCAACAACACTACATACTTATATCGAAGTAGTACATGTTTGGATGTTTCCTTCCATTTCATCTTGGGTTATAGCTG
GGGCTTTTTTAGGCTTATGTTATTACATTGTGACTGGAGGATTTCGTGTAGTTGCCGGAATTGGCTTCTTTGGAATCGTT
ATCCCAAGCATTCTAATCTTCACATTTTTTTATCCTTTGCAGTATGCAGATTTTCGAAATTTATTTCCAATTGCACAGCA
TTCATTCCTAGAAATTATGAAAGGAATGAAAGGAAATATGTTTAGTTTTTTTGGATTTGAAATGTTATTGCTGTACTACC
CATTTATTAAAAAGGCAAGAACGTCTCAAAAATATGCGCACTATGCAAATTTAGTAACGACTATTGTCTACACATACCTT
ATGATTTTAACTCTTGCGTTTTTTAGTGAAAAACAACTAGCGAGCGCGATATGGGCATATTTAAGCATGATTAAAATTAT
ACAGTTTCCCTTTATAGAGCGGTTTGAATACATTATTGTTTCTGTTTGGGCTTTTTTTATATTACCTAACGTTTCCTTTA
CATTATGGGGAGTAAGTCGTGGTATAAAAGAGGCACTGGGAATAAAGCAAAAATATGTTTTGCCAGTTATCATCCTGTTC
ATCTTTGTTTTATCATTTTTCTTGAATAACCGTAATAAAATTAACTTATTAAATACTTGGACAGGTCAAATTGGCTTTAT
ATATATATATGTATACTTACCTGTACTATGGCTAATTCAAACCGCCAAAATAAAGTTAAGGAGATAA

Upstream 100 bases:

>100_bases
TGTTCCGACGTCCTATTTTTTCAAGGTCTAAACAGCGTTTTCGTTTTAATCCAGAAGGGGTAGAGAAAAATAAAATCAAA
TCACGAAATGATTTTGATGA

Downstream 100 bases:

>100_bases
ACATGAAGCGCTGGATACTTTTCATTATAGTAAATGTCTTCTTAATAGGTTGTGCTAAAACGAAAATTGTGGATGACATT
GATTTAGTTCAAGTTGCGGC

Product: GerB family spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKLTGRSIMKQVPIEYQVSPYMVFFLIITIQMGVGMLGFERISAKLVGNDAWISTLLFGISVNLMIWIIYQILNQGNGDI
IAINQNVFGKWIGGMFNFIFLSYIVLLGATTLHTYIEVVHVWMFPSISSWVIAGAFLGLCYYIVTGGFRVVAGIGFFGIV
IPSILIFTFFYPLQYADFRNLFPIAQHSFLEIMKGMKGNMFSFFGFEMLLLYYPFIKKARTSQKYAHYANLVTTIVYTYL
MILTLAFFSEKQLASAIWAYLSMIKIIQFPFIERFEYIIVSVWAFFILPNVSFTLWGVSRGIKEALGIKQKYVLPVIILF
IFVLSFFLNNRNKINLLNTWTGQIGFIYIYVYLPVLWLIQTAKIKLRR

Sequences:

>Translated_368_residues
MKLTGRSIMKQVPIEYQVSPYMVFFLIITIQMGVGMLGFERISAKLVGNDAWISTLLFGISVNLMIWIIYQILNQGNGDI
IAINQNVFGKWIGGMFNFIFLSYIVLLGATTLHTYIEVVHVWMFPSISSWVIAGAFLGLCYYIVTGGFRVVAGIGFFGIV
IPSILIFTFFYPLQYADFRNLFPIAQHSFLEIMKGMKGNMFSFFGFEMLLLYYPFIKKARTSQKYAHYANLVTTIVYTYL
MILTLAFFSEKQLASAIWAYLSMIKIIQFPFIERFEYIIVSVWAFFILPNVSFTLWGVSRGIKEALGIKQKYVLPVIILF
IFVLSFFLNNRNKINLLNTWTGQIGFIYIYVYLPVLWLIQTAKIKLRR
>Mature_368_residues
MKLTGRSIMKQVPIEYQVSPYMVFFLIITIQMGVGMLGFERISAKLVGNDAWISTLLFGISVNLMIWIIYQILNQGNGDI
IAINQNVFGKWIGGMFNFIFLSYIVLLGATTLHTYIEVVHVWMFPSISSWVIAGAFLGLCYYIVTGGFRVVAGIGFFGIV
IPSILIFTFFYPLQYADFRNLFPIAQHSFLEIMKGMKGNMFSFFGFEMLLLYYPFIKKARTSQKYAHYANLVTTIVYTYL
MILTLAFFSEKQLASAIWAYLSMIKIIQFPFIERFEYIIVSVWAFFILPNVSFTLWGVSRGIKEALGIKQKYVLPVIILF
IFVLSFFLNNRNKINLLNTWTGQIGFIYIYVYLPVLWLIQTAKIKLRR

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 42503; Mature: 42503

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCC
>Mature Secondary Structure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HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]