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The map label for this gene is gerIC [H]

Identifier: 118478431

GI number: 118478431

Start: 2958026

End: 2959198

Strand: Reverse

Name: gerIC [H]

Synonym: BALH_2799

Alternate gene names: 118478431

Gene position: 2959198-2958026 (Counterclockwise)

Preceding gene: 118478432

Following gene: 118478429

Centisome position: 56.29

GC content: 33.76

Gene sequence:

>1173_bases
TTGGACAGGTCAAATTGGCTTTATATATATATATGTATACTTACCTGTACTATGGCTAATTCAAACCGCCAAAATAAAGT
TAAGGAGATAAACATGAAGCGCTGGATACTTTTCATTATAGTAAATGTCTTCTTAATAGGTTGTGCTAAAACGAAAATTG
TGGATGACATTGATTTAGTTCAAGTTGCGGCATATGATACTGAAGCAGAAGGTAAGCTAAAAGGAACCTTTGCGATTTCA
GCTTATAAAGGAGGGGGGGAAGGTGAAACGAAAATCTATTCAGCATCAGGCCAGACTGGTAGAGAAGTTCTTGCAAGAGC
ATCCGAAAAATCTTCTGGACCTCTAGAGTTGGGTCAATTGCGTGTGATTATATTTAATGAAAAAATAATTGAAAAGGGAA
TGCAGGAAATTTTAGAGACTTTGAACCGAAATCCTAGTGTAGGAAATGCAATTTATTTAGCAATTACAAATGTAAAAGGG
GAATCACTATTAAAGGGGAACTATTCTAAAGAAAAAGAAATTGCTTCCTATCTATCCTCTTTACTGGAGCAAAATATGGA
CAACGGAACGCAGCCAAAAACAAACTTTTTTATGTTTTTAAATCAACTTGATGATGATGCGAGGGATTCCTATTTGCCGA
TGATATCTAAAAAGGGGAACGTGTTGGAGCTAAATGGAATAGTACTTTTTAAAAAACATAATATGGTCGATAGAGTAAAA
TCTAAAGATTTATTTGTATTTAAATTGTTGACAGATAATTTTAAACAAGGCACATACCAATTCAAACTACCTGGTTCTTC
AAATACTCACGCTACGATAGAGAATATAAAGGCAGGAACGAAATATAAGATGGAAGGGAATAGTGAACATCCATTTGTAA
ATGCTCATATTCAAGTTAAAGGTGAAATTCAAGAATTCACAAAAACAAAAAATCTTGATAACCCCAAAGAAATCCACAAG
TTAGAAAAAATCATGGAAAAAGAAATAGAAAAAGAAGCATCTGCATTAATAAAGAGATTTATTAAACAAGGCACAGATCC
TATAGGGCTTAGAAAGCTTGGTAGAACTCGCGTAAGAAAATGGAACAGTCAAGAATGGGAAGAATCCTATAAACATTTAC
GTTTTCGTGTAACAGCTGATGTAAAAGTAACCCAATCTGGTGTTACAGAATAA

Upstream 100 bases:

>100_bases
TGGGAATAAAGCAAAAATATGTTTTGCCAGTTATCATCCTGTTCATCTTTGTTTTATCATTTTTCTTGAATAACCGTAAT
AAAATTAACTTATTAAATAC

Downstream 100 bases:

>100_bases
ATAAATTAAATAAGATATAGGAAATTTCAATAAAAAATATAGTTTCGCAGGAGATTAGGGAGAAGAGAAACGATTAACAA
AGCATTTCATAAACATTAAG

Product: GerC family spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MDRSNWLYIYICILTCTMANSNRQNKVKEINMKRWILFIIVNVFLIGCAKTKIVDDIDLVQVAAYDTEAEGKLKGTFAIS
AYKGGGEGETKIYSASGQTGREVLARASEKSSGPLELGQLRVIIFNEKIIEKGMQEILETLNRNPSVGNAIYLAITNVKG
ESLLKGNYSKEKEIASYLSSLLEQNMDNGTQPKTNFFMFLNQLDDDARDSYLPMISKKGNVLELNGIVLFKKHNMVDRVK
SKDLFVFKLLTDNFKQGTYQFKLPGSSNTHATIENIKAGTKYKMEGNSEHPFVNAHIQVKGEIQEFTKTKNLDNPKEIHK
LEKIMEKEIEKEASALIKRFIKQGTDPIGLRKLGRTRVRKWNSQEWEESYKHLRFRVTADVKVTQSGVTE

Sequences:

>Translated_390_residues
MDRSNWLYIYICILTCTMANSNRQNKVKEINMKRWILFIIVNVFLIGCAKTKIVDDIDLVQVAAYDTEAEGKLKGTFAIS
AYKGGGEGETKIYSASGQTGREVLARASEKSSGPLELGQLRVIIFNEKIIEKGMQEILETLNRNPSVGNAIYLAITNVKG
ESLLKGNYSKEKEIASYLSSLLEQNMDNGTQPKTNFFMFLNQLDDDARDSYLPMISKKGNVLELNGIVLFKKHNMVDRVK
SKDLFVFKLLTDNFKQGTYQFKLPGSSNTHATIENIKAGTKYKMEGNSEHPFVNAHIQVKGEIQEFTKTKNLDNPKEIHK
LEKIMEKEIEKEASALIKRFIKQGTDPIGLRKLGRTRVRKWNSQEWEESYKHLRFRVTADVKVTQSGVTE
>Mature_390_residues
MDRSNWLYIYICILTCTMANSNRQNKVKEINMKRWILFIIVNVFLIGCAKTKIVDDIDLVQVAAYDTEAEGKLKGTFAIS
AYKGGGEGETKIYSASGQTGREVLARASEKSSGPLELGQLRVIIFNEKIIEKGMQEILETLNRNPSVGNAIYLAITNVKG
ESLLKGNYSKEKEIASYLSSLLEQNMDNGTQPKTNFFMFLNQLDDDARDSYLPMISKKGNVLELNGIVLFKKHNMVDRVK
SKDLFVFKLLTDNFKQGTYQFKLPGSSNTHATIENIKAGTKYKMEGNSEHPFVNAHIQVKGEIQEFTKTKNLDNPKEIHK
LEKIMEKEIEKEASALIKRFIKQGTDPIGLRKLGRTRVRKWNSQEWEESYKHLRFRVTADVKVTQSGVTE

Specific function: May be involved in spore germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKC lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008844 [H]

Pfam domain/function: PF05504 Spore_GerAC [H]

EC number: NA

Molecular weight: Translated: 44311; Mature: 44311

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRSNWLYIYICILTCTMANSNRQNKVKEINMKRWILFIIVNVFLIGCAKTKIVDDIDLV
CCCCCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEE
QVAAYDTEAEGKLKGTFAISAYKGGGEGETKIYSASGQTGREVLARASEKSSGPLELGQL
EEEEECCCCCCCEEEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEEECEE
RVIIFNEKIIEKGMQEILETLNRNPSVGNAIYLAITNVKGESLLKGNYSKEKEIASYLSS
EEEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHCCCCCCHHHHHHHHHHH
LLEQNMDNGTQPKTNFFMFLNQLDDDARDSYLPMISKKGNVLELNGIVLFKKHNMVDRVK
HHHHCCCCCCCCCHHHEEEEECCCCCCCCCCCCHHCCCCCEEEECCEEEEECCCHHHHHC
SKDLFVFKLLTDNFKQGTYQFKLPGSSNTHATIENIKAGTKYKMEGNSEHPFVNAHIQVK
CCCEEEEEEECCCCCCCEEEEECCCCCCCCEEHHHCCCCCEEEECCCCCCCEEEEEEEEE
GEIQEFTKTKNLDNPKEIHKLEKIMEKEIEKEASALIKRFIKQGTDPIGLRKLGRTRVRK
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
WNSQEWEESYKHLRFRVTADVKVTQSGVTE
CCCHHHHHHHHHEEEEEEEEEEEECCCCCC
>Mature Secondary Structure
MDRSNWLYIYICILTCTMANSNRQNKVKEINMKRWILFIIVNVFLIGCAKTKIVDDIDLV
CCCCCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEE
QVAAYDTEAEGKLKGTFAISAYKGGGEGETKIYSASGQTGREVLARASEKSSGPLELGQL
EEEEECCCCCCCEEEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEEECEE
RVIIFNEKIIEKGMQEILETLNRNPSVGNAIYLAITNVKGESLLKGNYSKEKEIASYLSS
EEEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHCCCCCCHHHHHHHHHHH
LLEQNMDNGTQPKTNFFMFLNQLDDDARDSYLPMISKKGNVLELNGIVLFKKHNMVDRVK
HHHHCCCCCCCCCHHHEEEEECCCCCCCCCCCCHHCCCCCEEEECCEEEEECCCHHHHHC
SKDLFVFKLLTDNFKQGTYQFKLPGSSNTHATIENIKAGTKYKMEGNSEHPFVNAHIQVK
CCCEEEEEEECCCCCCCEEEEECCCCCCCCEEHHHCCCCCEEEECCCCCCCEEEEEEEEE
GEIQEFTKTKNLDNPKEIHKLEKIMEKEIEKEASALIKRFIKQGTDPIGLRKLGRTRVRK
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
WNSQEWEESYKHLRFRVTADVKVTQSGVTE
CCCHHHHHHHHHEEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]