Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is 118478411
Identifier: 118478411
GI number: 118478411
Start: 2937318
End: 2938541
Strand: Reverse
Name: 118478411
Synonym: BALH_2777
Alternate gene names: NA
Gene position: 2938541-2937318 (Counterclockwise)
Preceding gene: 118478413
Following gene: 118478410
Centisome position: 55.9
GC content: 37.09
Gene sequence:
>1224_bases TTGTTGGTTATTATAAATCAAATGATAGGAGGAGAAAAGAAAATGTTTAAAAATAAACTTTTATGGTTATCACCAGTTAT TGCACTACTTGTAATTTTTATTTTTTCATTAACATTATTTCCAACCGTTCAACCTCAGCCGAAAAACTTACCAATCGCAG TTGTAAATGAAGATCAAGGGGTAGAAATTCCGAATCAACCGAAGATGAACATGGGGCAAACGATTGTTGATAATATGAAA AAGACATCAAAATTAGAGGAAGAACCTGCGGTGAAGTGGGTAGAAGTGAAAAATAAAGAGGCAGTTCAAAAAGGCTTAAA TAATCAAGAGTATTACGCAGCATTAGTCATACCGAAAGACTTTAGTACAAAACAAGCATCATTACGAACACCACAGCCAT CTTCGCCAGAGGTAGAAATATTTATCAATCAAGGAATGAATACAGCGGCATCAACTATGGCAGGGCAAATGTTAAATGTG ATCGTTGATAATATGAACAATACTGTTCGCGCGCAACTATTAGATGGAGTAAAAGCAAAAGGGGCTACATTAACAACAGA TCAGGCTGCGAAATTAGTAACACCGATTACAAAGAAAGTGACAAACGTAAATGAAATCGGCAAAAATAGTGCGAACGGTA ACGCACCAATTTCATTATTCCAGCCGTTATGGATCGCAAGTTTAGCGAGTGCAGCGATTATTTTTATGGCAATTCGTAAC ATGCCGGTAGGTTCAAGAAAAGAAAACTTCGTATTAAAAGTAAAACAAATCATAACAGGAGCTGTGGCAGCAGTTGTAGT TGGATTTGGTCTGACATGGATTGCGGATGGAATGGTAGGATTAAATATTTCGAATTTCACGGATACGGCCTTATTTCTAT CCATTACATCGTTTAGTTTCTTCTTAATGATATCAGCGGTACTTTCACTAGTTGGGCTAAAAGGAATCGGTGTATTCGCT CTCTTACTATTCTTCGGTGCACCGTTATTATCATTAGCACCTGAAATGTTATCGCCATTTTATCAAGATTGGGTTTATTC TTGGTTGCCAATGCGATTTATGATTGAAGGACTTCGGGAAATCTTCTTCTTCGGAAAAGGGTTAAGCTGGAGTACACCTG TTATTGTGCTTATTTGGATTGGCGCGGTAAGTATCGTTATTATTTTAGCGACTGCTTTAAAACGTAGTGCAGTAAAGGGA CATAAAACGGAATTACAGGTATAA
Upstream 100 bases:
>100_bases CATTTCAAGAATGTGTATGATAACCGACACATTCACGATTTTTGATTATTGTATAAGGTTCAACTCGAACATATAATTCA AAATATAAATAAACAACACG
Downstream 100 bases:
>100_bases AAGATAAAAACGTTTCACTAGGAGTGAAGCGTTTTTTTGTTTAGATGTAAGCTAAGTAGCATAGAAGAGATATTTAAAAG TAGGAATTAATGGTGTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: YhgE/Pip N-Terminal Domain Protein; YhgE/Pip Domain-Containing Protein; Integral Membrane Protein; ABC-2 Type Transporter; Phage-Related Infection Protein; YhgE/Pip-Like Protein; YhgE/Pip C-Terminal Domain Protein; ABC-2 Type Transporter Protein
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MLVIINQMIGGEKKMFKNKLLWLSPVIALLVIFIFSLTLFPTVQPQPKNLPIAVVNEDQGVEIPNQPKMNMGQTIVDNMK KTSKLEEEPAVKWVEVKNKEAVQKGLNNQEYYAALVIPKDFSTKQASLRTPQPSSPEVEIFINQGMNTAASTMAGQMLNV IVDNMNNTVRAQLLDGVKAKGATLTTDQAAKLVTPITKKVTNVNEIGKNSANGNAPISLFQPLWIASLASAAIIFMAIRN MPVGSRKENFVLKVKQIITGAVAAVVVGFGLTWIADGMVGLNISNFTDTALFLSITSFSFFLMISAVLSLVGLKGIGVFA LLLFFGAPLLSLAPEMLSPFYQDWVYSWLPMRFMIEGLREIFFFGKGLSWSTPVIVLIWIGAVSIVIILATALKRSAVKG HKTELQV
Sequences:
>Translated_407_residues MLVIINQMIGGEKKMFKNKLLWLSPVIALLVIFIFSLTLFPTVQPQPKNLPIAVVNEDQGVEIPNQPKMNMGQTIVDNMK KTSKLEEEPAVKWVEVKNKEAVQKGLNNQEYYAALVIPKDFSTKQASLRTPQPSSPEVEIFINQGMNTAASTMAGQMLNV IVDNMNNTVRAQLLDGVKAKGATLTTDQAAKLVTPITKKVTNVNEIGKNSANGNAPISLFQPLWIASLASAAIIFMAIRN MPVGSRKENFVLKVKQIITGAVAAVVVGFGLTWIADGMVGLNISNFTDTALFLSITSFSFFLMISAVLSLVGLKGIGVFA LLLFFGAPLLSLAPEMLSPFYQDWVYSWLPMRFMIEGLREIFFFGKGLSWSTPVIVLIWIGAVSIVIILATALKRSAVKG HKTELQV >Mature_407_residues MLVIINQMIGGEKKMFKNKLLWLSPVIALLVIFIFSLTLFPTVQPQPKNLPIAVVNEDQGVEIPNQPKMNMGQTIVDNMK KTSKLEEEPAVKWVEVKNKEAVQKGLNNQEYYAALVIPKDFSTKQASLRTPQPSSPEVEIFINQGMNTAASTMAGQMLNV IVDNMNNTVRAQLLDGVKAKGATLTTDQAAKLVTPITKKVTNVNEIGKNSANGNAPISLFQPLWIASLASAAIIFMAIRN MPVGSRKENFVLKVKQIITGAVAAVVVGFGLTWIADGMVGLNISNFTDTALFLSITSFSFFLMISAVLSLVGLKGIGVFA LLLFFGAPLLSLAPEMLSPFYQDWVYSWLPMRFMIEGLREIFFFGKGLSWSTPVIVLIWIGAVSIVIILATALKRSAVKG HKTELQV
Specific function: Unknown
COG id: COG1511
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44519; Mature: 44519
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVIINQMIGGEKKMFKNKLLWLSPVIALLVIFIFSLTLFPTVQPQPKNLPIAVVNEDQG CEEEEECHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC VEIPNQPKMNMGQTIVDNMKKTSKLEEEPAVKWVEVKNKEAVQKGLNNQEYYAALVIPKD CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCCCCEEEEEEEECC FSTKQASLRTPQPSSPEVEIFINQGMNTAASTMAGQMLNVIVDNMNNTVRAQLLDGVKAK CCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHCC GATLTTDQAAKLVTPITKKVTNVNEIGKNSANGNAPISLFQPLWIASLASAAIIFMAIRN CCEECCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC MPVGSRKENFVLKVKQIITGAVAAVVVGFGLTWIADGMVGLNISNFTDTALFLSITSFSF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECEECCCHHHHHHHHHHHHHH FLMISAVLSLVGLKGIGVFALLLFFGAPLLSLAPEMLSPFYQDWVYSWLPMRFMIEGLRE HHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH IFFFGKGLSWSTPVIVLIWIGAVSIVIILATALKRSAVKGHKTELQV HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLVIINQMIGGEKKMFKNKLLWLSPVIALLVIFIFSLTLFPTVQPQPKNLPIAVVNEDQG CEEEEECHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC VEIPNQPKMNMGQTIVDNMKKTSKLEEEPAVKWVEVKNKEAVQKGLNNQEYYAALVIPKD CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCCCCEEEEEEEECC FSTKQASLRTPQPSSPEVEIFINQGMNTAASTMAGQMLNVIVDNMNNTVRAQLLDGVKAK CCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHCC GATLTTDQAAKLVTPITKKVTNVNEIGKNSANGNAPISLFQPLWIASLASAAIIFMAIRN CCEECCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC MPVGSRKENFVLKVKQIITGAVAAVVVGFGLTWIADGMVGLNISNFTDTALFLSITSFSF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECEECCCHHHHHHHHHHHHHH FLMISAVLSLVGLKGIGVFALLLFFGAPLLSLAPEMLSPFYQDWVYSWLPMRFMIEGLRE HHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH IFFFGKGLSWSTPVIVLIWIGAVSIVIILATALKRSAVKGHKTELQV HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA