| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is acoL [H]
Identifier: 118478134
GI number: 118478134
Start: 2654236
End: 2655615
Strand: Reverse
Name: acoL [H]
Synonym: BALH_2491
Alternate gene names: 118478134
Gene position: 2655615-2654236 (Counterclockwise)
Preceding gene: 118478135
Following gene: 118478132
Centisome position: 50.51
GC content: 38.33
Gene sequence:
>1380_bases ATGAGTAAATTAGTCGTTATTGGAGGCGGACCTGCTGGCTATGTAGCGGCAATTACCGCGGCTCAAAATGGAAAAAATGT CACTCTTATTGATGAAGCTGATCTTGGCGGGACTTGTTTAAATGTCGGGTGCATGCCTACAAAATCATTGTTAGAAAGTG CAGAAGTGCATGACATTGTGAGAAAAGCGAATCATTATGGAGTTACACTTAACAAAGAAAGTATATCAGTTGATTGGAAG CAAATGCAGGTGAGGAAATCACAAATCGTAACGCAGCTCGTCCAAGGAATTCAATATTTAATGAAGAAAAATAAAATAAA AGTTATACAAGGTAAAGCGAGATTTGAAACGGATCATCGTGTACGAATTACATACGGTGATAAAGAAGATATAGTAGATG GAGAACAGTTCATTATAGCGACAGGTTCAGAACCAACTGAATTACCTCTTGCTCCATTTGATGGAAAGTGGATTTTAAAT AGTAGCCATGCAATGTCCATAGATCATATACCGAAATCATTATTAATCGTTGGCGGTGGTGTAATAGGGTGCGAGTTTGC CAGTATTTATAGTCGTCTTGGAACAAAAGTTACAATTGTTGAAATGGCACCGCAACTATTACTAGGTGAAGATGAAGATA TCGCACACATTTTAAGAGGAAAACTAGAAACTGATGGCGTAAAAATATTTACAGGGGCAGCTTTAAAAGGATTAAATAGT TATAAGAAGCAGGCTTTATTTGAATATGAAGGAAGTATCCAAGAAGTTAATCCAGAATTTGTTCTCGTTTCTGTCGGCCG AAAACCACGTGTACAAAAATTAAATTTAGAAAAAGCAGGCATTCAATATTCAAATAAAGGAATTTCTGTGAATGAACATA TGCAAACCAATGTATCACATATTTACGCAGCAGGTGATGTGATTGGTGGAATCCAGCTTGCTCACGTTGCATTCCATGAA GGAACGACGGCAGCATTACACGCGAGCGGAGAAGATGTAAAAGTTAACTATCATGCTGTACCTCGTTGTATGTATACCGC TCCAGAAATTGCTAGCGTTGGTCTAACAGAAAAAGATGCAAAAGAGCAGTACGGTGACATACAAATTGGAGAATTTCCTT TTACAGCGAACGGAAAAGCGCTTATTATTGGAGAACAAACGGGGAAAGTAAAAGTTATTGTGGAACCTAAATATCAAGAA ATTGTTGGGATTTCTATTATCGGTCCACGTGCAACCGAACTAATTGGTCAAGGAACTGTAATGATTCATACGGAAGTTAC TGCCGATATTATGAGAGATTATATTGCAGCGCATCCGACTTTATCTGAAGCGATTCATGAAGCGCTATTGCAAGCAGTAG GGCATGCTGTACATGCTTAA
Upstream 100 bases:
>100_bases TCGTGTACTAGACGGTGCACCAGCAGCTGCATTTTTACGCACAATTAAACGCTATTTAGAAGAACCTGTAACAATTCTTT TATAAAGAGAAGGTGAGAGA
Downstream 100 bases:
>100_bases ATGGAATTATAATAAACCACTATTCTCTAAATGAATAAGAGAATAGTGGTTTGAATTTTTACGGAAGAAATTGAATATCC TATTATTTTTTTACGTCAAT
Product: dihydrolipoamide dehydrogenase
Products: NA
Alternate protein names: Dihydrolipoamide dehydrogenase; E3 component of acetoin cleaving system [H]
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MSKLVVIGGGPAGYVAAITAAQNGKNVTLIDEADLGGTCLNVGCMPTKSLLESAEVHDIVRKANHYGVTLNKESISVDWK QMQVRKSQIVTQLVQGIQYLMKKNKIKVIQGKARFETDHRVRITYGDKEDIVDGEQFIIATGSEPTELPLAPFDGKWILN SSHAMSIDHIPKSLLIVGGGVIGCEFASIYSRLGTKVTIVEMAPQLLLGEDEDIAHILRGKLETDGVKIFTGAALKGLNS YKKQALFEYEGSIQEVNPEFVLVSVGRKPRVQKLNLEKAGIQYSNKGISVNEHMQTNVSHIYAAGDVIGGIQLAHVAFHE GTTAALHASGEDVKVNYHAVPRCMYTAPEIASVGLTEKDAKEQYGDIQIGEFPFTANGKALIIGEQTGKVKVIVEPKYQE IVGISIIGPRATELIGQGTVMIHTEVTADIMRDYIAAHPTLSEAIHEALLQAVGHAVHA
Sequences:
>Translated_459_residues MSKLVVIGGGPAGYVAAITAAQNGKNVTLIDEADLGGTCLNVGCMPTKSLLESAEVHDIVRKANHYGVTLNKESISVDWK QMQVRKSQIVTQLVQGIQYLMKKNKIKVIQGKARFETDHRVRITYGDKEDIVDGEQFIIATGSEPTELPLAPFDGKWILN SSHAMSIDHIPKSLLIVGGGVIGCEFASIYSRLGTKVTIVEMAPQLLLGEDEDIAHILRGKLETDGVKIFTGAALKGLNS YKKQALFEYEGSIQEVNPEFVLVSVGRKPRVQKLNLEKAGIQYSNKGISVNEHMQTNVSHIYAAGDVIGGIQLAHVAFHE GTTAALHASGEDVKVNYHAVPRCMYTAPEIASVGLTEKDAKEQYGDIQIGEFPFTANGKALIIGEQTGKVKVIVEPKYQE IVGISIIGPRATELIGQGTVMIHTEVTADIMRDYIAAHPTLSEAIHEALLQAVGHAVHA >Mature_458_residues SKLVVIGGGPAGYVAAITAAQNGKNVTLIDEADLGGTCLNVGCMPTKSLLESAEVHDIVRKANHYGVTLNKESISVDWKQ MQVRKSQIVTQLVQGIQYLMKKNKIKVIQGKARFETDHRVRITYGDKEDIVDGEQFIIATGSEPTELPLAPFDGKWILNS SHAMSIDHIPKSLLIVGGGVIGCEFASIYSRLGTKVTIVEMAPQLLLGEDEDIAHILRGKLETDGVKIFTGAALKGLNSY KKQALFEYEGSIQEVNPEFVLVSVGRKPRVQKLNLEKAGIQYSNKGISVNEHMQTNVSHIYAAGDVIGGIQLAHVAFHEG TTAALHASGEDVKVNYHAVPRCMYTAPEIASVGLTEKDAKEQYGDIQIGEFPFTANGKALIIGEQTGKVKVIVEPKYQEI VGISIIGPRATELIGQGTVMIHTEVTADIMRDYIAAHPTLSEAIHEALLQAVGHAVHA
Specific function: Lipoamide Dehydrogenase Is A Component Of The Glycine Cleavage System As Well As Of The Alpha-Ketoacid Dehydrogenase Complexes. [C]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=460, Percent_Identity=34.3478260869565, Blast_Score=258, Evalue=6e-69, Organism=Homo sapiens, GI50301238, Length=448, Percent_Identity=28.5714285714286, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI148277071, Length=461, Percent_Identity=27.5488069414317, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI148277065, Length=461, Percent_Identity=27.5488069414317, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI33519430, Length=453, Percent_Identity=27.8145695364238, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI33519428, Length=453, Percent_Identity=27.8145695364238, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI33519426, Length=453, Percent_Identity=27.8145695364238, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI22035672, Length=458, Percent_Identity=27.9475982532751, Blast_Score=140, Evalue=4e-33, Organism=Homo sapiens, GI291045266, Length=460, Percent_Identity=26.0869565217391, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI291045268, Length=451, Percent_Identity=24.1685144124169, Blast_Score=116, Evalue=5e-26, Organism=Escherichia coli, GI1786307, Length=449, Percent_Identity=31.6258351893096, Blast_Score=254, Evalue=1e-68, Organism=Escherichia coli, GI87081717, Length=452, Percent_Identity=30.7522123893805, Blast_Score=192, Evalue=3e-50, Organism=Escherichia coli, GI87082354, Length=465, Percent_Identity=27.9569892473118, Blast_Score=175, Evalue=5e-45, Organism=Escherichia coli, GI1789915, Length=433, Percent_Identity=28.4064665127021, Blast_Score=166, Evalue=4e-42, Organism=Caenorhabditis elegans, GI32565766, Length=471, Percent_Identity=37.1549893842887, Blast_Score=271, Evalue=4e-73, Organism=Caenorhabditis elegans, GI17557007, Length=470, Percent_Identity=28.0851063829787, Blast_Score=150, Evalue=9e-37, Organism=Caenorhabditis elegans, GI71983429, Length=442, Percent_Identity=26.2443438914027, Blast_Score=121, Evalue=8e-28, Organism=Caenorhabditis elegans, GI71983419, Length=442, Percent_Identity=26.2443438914027, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI71982272, Length=457, Percent_Identity=25.164113785558, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17559934, Length=224, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6321091, Length=472, Percent_Identity=38.5593220338983, Blast_Score=277, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6325166, Length=449, Percent_Identity=27.1714922048998, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6325240, Length=480, Percent_Identity=26.875, Blast_Score=163, Evalue=4e-41, Organism=Drosophila melanogaster, GI21358499, Length=459, Percent_Identity=36.6013071895425, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI24640549, Length=465, Percent_Identity=28.3870967741935, Blast_Score=158, Evalue=7e-39, Organism=Drosophila melanogaster, GI24640553, Length=465, Percent_Identity=28.3870967741935, Blast_Score=158, Evalue=7e-39, Organism=Drosophila melanogaster, GI24640551, Length=465, Percent_Identity=28.3870967741935, Blast_Score=158, Evalue=9e-39, Organism=Drosophila melanogaster, GI17737741, Length=466, Percent_Identity=27.4678111587983, Blast_Score=142, Evalue=4e-34,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR006258 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.4 [H]
Molecular weight: Translated: 49618; Mature: 49487
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLVVIGGGPAGYVAAITAAQNGKNVTLIDEADLGGTCLNVGCMPTKSLLESAEVHDIV CCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHH RKANHYGVTLNKESISVDWKQMQVRKSQIVTQLVQGIQYLMKKNKIKVIQGKARFETDHR HHCCCCEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCE VRITYGDKEDIVDGEQFIIATGSEPTELPLAPFDGKWILNSSHAMSIDHIPKSLLIVGGG EEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCEEEHHCCCCEEEEECCC VIGCEFASIYSRLGTKVTIVEMAPQLLLGEDEDIAHILRGKLETDGVKIFTGAALKGLNS EEEHHHHHHHHHHCCEEEEEECCCHHHCCCCCHHHHHHCCCCCCCCEEEEECHHHHHHHH YKKQALFEYEGSIQEVNPEFVLVSVGRKPRVQKLNLEKAGIQYSNKGISVNEHMQTNVSH HHHHHHHHHCCCCEECCCCEEEEECCCCCCCEEECCHHCCCEECCCCCCCCHHHHCCCCE IYAAGDVIGGIQLAHVAFHEGTTAALHASGEDVKVNYHAVPRCMYTAPEIASVGLTEKDA EEECCCHHCCEEEEEEEEECCCEEEEEECCCEEEEEEEECCEEEECCCCHHHCCCCCHHH KEQYGDIQIGEFPFTANGKALIIGEQTGKVKVIVEPKYQEIVGISIIGPRATELIGQGTV HHHCCCEEECCCCCCCCCCEEEEECCCCEEEEEECCCHHHEEEEEEECCCHHHHHCCCEE MIHTEVTADIMRDYIAAHPTLSEAIHEALLQAVGHAVHA EEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKLVVIGGGPAGYVAAITAAQNGKNVTLIDEADLGGTCLNVGCMPTKSLLESAEVHDIV CEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHH RKANHYGVTLNKESISVDWKQMQVRKSQIVTQLVQGIQYLMKKNKIKVIQGKARFETDHR HHCCCCEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCE VRITYGDKEDIVDGEQFIIATGSEPTELPLAPFDGKWILNSSHAMSIDHIPKSLLIVGGG EEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCEEEHHCCCCEEEEECCC VIGCEFASIYSRLGTKVTIVEMAPQLLLGEDEDIAHILRGKLETDGVKIFTGAALKGLNS EEEHHHHHHHHHHCCEEEEEECCCHHHCCCCCHHHHHHCCCCCCCCEEEEECHHHHHHHH YKKQALFEYEGSIQEVNPEFVLVSVGRKPRVQKLNLEKAGIQYSNKGISVNEHMQTNVSH HHHHHHHHHCCCCEECCCCEEEEECCCCCCCEEECCHHCCCEECCCCCCCCHHHHCCCCE IYAAGDVIGGIQLAHVAFHEGTTAALHASGEDVKVNYHAVPRCMYTAPEIASVGLTEKDA EEECCCHHCCEEEEEEEEECCCEEEEEECCCEEEEEEEECCEEEECCCCHHHCCCCCHHH KEQYGDIQIGEFPFTANGKALIIGEQTGKVKVIVEPKYQEIVGISIIGPRATELIGQGTV HHHCCCEEECCCCCCCCCCEEEEECCCCEEEEEECCCHHHEEEEEEECCCHHHHHCCCEE MIHTEVTADIMRDYIAAHPTLSEAIHEALLQAVGHAVHA EEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10368162; 8969503; 9384377 [H]