| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118478065
Identifier: 118478065
GI number: 118478065
Start: 2590044
End: 2591009
Strand: Reverse
Name: 118478065
Synonym: BALH_2420
Alternate gene names: NA
Gene position: 2591009-2590044 (Counterclockwise)
Preceding gene: 118478069
Following gene: 118478054
Centisome position: 49.29
GC content: 34.78
Gene sequence:
>966_bases ATGAAAAAGAAATATATAAATCAAATTCATACTGATGTAAGTTTTAAACCGAAAGATATTATAGGTTTAATAAATGATTA CTTTAAAATGAAATCAAAGCTGCGTCCTATAAAGAATTTACCTATTGTTTTATCAAATAAGGATAATGAATCTTTAGAAA GTGTTACATGGTTTGGGCATTCTGCTTCTCTTTTAAAAATAGAAGGTAAAACATTGTTATTAGACCCGATGTTTGGAGAT GCCTCTTCCCCGTTTCCTCTGTTTAATAGTAAACGTTATAGTGGTGCTTTTTCTTTAGAGCGTGAAGATCTTCAAGAGAT TGATGCGATTATCATTTCTCATAATCACTATGACCATCTGAATTATAAAAGTATTATGCGGTTAAAAGATCGTGCAAAGC ACTTTTATGTTCCAACTGGAGTTGCGCAATATTTAATGAAATGGGGTGTTTCACCTAGTAAAATTAGTGAGCATAATTGG TGGGATGAAATTATGCTTGATGCTATTAAGTTAGTATGTGCCCCTGCAAGGCATTTCTCTGGACGAGGTATGACAGATAG AGATTGTTCATTATGGTGTTCATGGCTTATTCTTGGTCAAGAAACTAAAGTTTTCTTTAGTGGTGATAGTGGTTATGCGC CTCATTTTAAGGAAATTGGTGACAAATATGGTCCATTCGATCTTACATTGATGGAATGCGGGCAATATGATCCAAGGTGG TCTGCAATTCATATGTTACCTGAAGAAACAGTACAAGCTCATATTGATGTAAAAGGAGAATTACTTCTTCCGATTCATTG GGGTGCTTTTACATTAGCATTACACGAATGGAGTGACCCGATAGAACGTGTTACGAAGGAAGCGAATCGTTTTTTAGGAG TTAAAATTACAACGCCTCAAATTGGCGAATCTATTACGTTAAAATCTACAGACTATCCTAGGTATGCTTGGTGGCAAAAA GTCTAA
Upstream 100 bases:
>100_bases ATTTATTTGTCCAAAATCTAATAACACACCACTATACAATAAAAGACTATAAGCTACAATAACAACATACGTATATTGTT AAACGTAAAAAGGAGATCGA
Downstream 100 bases:
>100_bases TTATAATAAAAAGCGAATCTGTCTTATATAAAAGATTCGCTTTTTACTTATTGATTATAATGTATCGTTGACAAACTGAT TAAACTTGTCTATTTCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MKKKYINQIHTDVSFKPKDIIGLINDYFKMKSKLRPIKNLPIVLSNKDNESLESVTWFGHSASLLKIEGKTLLLDPMFGD ASSPFPLFNSKRYSGAFSLEREDLQEIDAIIISHNHYDHLNYKSIMRLKDRAKHFYVPTGVAQYLMKWGVSPSKISEHNW WDEIMLDAIKLVCAPARHFSGRGMTDRDCSLWCSWLILGQETKVFFSGDSGYAPHFKEIGDKYGPFDLTLMECGQYDPRW SAIHMLPEETVQAHIDVKGELLLPIHWGAFTLALHEWSDPIERVTKEANRFLGVKITTPQIGESITLKSTDYPRYAWWQK V
Sequences:
>Translated_321_residues MKKKYINQIHTDVSFKPKDIIGLINDYFKMKSKLRPIKNLPIVLSNKDNESLESVTWFGHSASLLKIEGKTLLLDPMFGD ASSPFPLFNSKRYSGAFSLEREDLQEIDAIIISHNHYDHLNYKSIMRLKDRAKHFYVPTGVAQYLMKWGVSPSKISEHNW WDEIMLDAIKLVCAPARHFSGRGMTDRDCSLWCSWLILGQETKVFFSGDSGYAPHFKEIGDKYGPFDLTLMECGQYDPRW SAIHMLPEETVQAHIDVKGELLLPIHWGAFTLALHEWSDPIERVTKEANRFLGVKITTPQIGESITLKSTDYPRYAWWQK V >Mature_321_residues MKKKYINQIHTDVSFKPKDIIGLINDYFKMKSKLRPIKNLPIVLSNKDNESLESVTWFGHSASLLKIEGKTLLLDPMFGD ASSPFPLFNSKRYSGAFSLEREDLQEIDAIIISHNHYDHLNYKSIMRLKDRAKHFYVPTGVAQYLMKWGVSPSKISEHNW WDEIMLDAIKLVCAPARHFSGRGMTDRDCSLWCSWLILGQETKVFFSGDSGYAPHFKEIGDKYGPFDLTLMECGQYDPRW SAIHMLPEETVQAHIDVKGELLLPIHWGAFTLALHEWSDPIERVTKEANRFLGVKITTPQIGESITLKSTDYPRYAWWQK V
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To K.pneumoniae romA [H]
Homologues:
Organism=Homo sapiens, GI170932483, Length=245, Percent_Identity=36.734693877551, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI170932481, Length=245, Percent_Identity=36.734693877551, Blast_Score=177, Evalue=2e-44, Organism=Caenorhabditis elegans, GI25148824, Length=255, Percent_Identity=31.3725490196078, Blast_Score=151, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17543102, Length=255, Percent_Identity=31.3725490196078, Blast_Score=151, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17543100, Length=255, Percent_Identity=31.3725490196078, Blast_Score=151, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17543104, Length=254, Percent_Identity=31.496062992126, Blast_Score=149, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6325154, Length=239, Percent_Identity=30.1255230125523, Blast_Score=110, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37028; Mature: 37028
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKYINQIHTDVSFKPKDIIGLINDYFKMKSKLRPIKNLPIVLSNKDNESLESVTWFGH CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHEEEECC SASLLKIEGKTLLLDPMFGDASSPFPLFNSKRYSGAFSLEREDLQEIDAIIISHNHYDHL CCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHEEEEECCCCCCC NYKSIMRLKDRAKHFYVPTGVAQYLMKWGVSPSKISEHNWWDEIMLDAIKLVCAPARHFS CHHHHHHHHHHCCEEECCHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCC GRGMTDRDCSLWCSWLILGQETKVFFSGDSGYAPHFKEIGDKYGPFDLTLMECGQYDPRW CCCCCCCCHHHEEEEEEECCCEEEEEECCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCC SAIHMLPEETVQAHIDVKGELLLPIHWGAFTLALHEWSDPIERVTKEANRFLGVKITTPQ EEEEECCHHHHEEEEEECCCEEEEEECCEEEEEEHHHCCHHHHHHHHHHHEEEEEEECCC IGESITLKSTDYPRYAWWQKV CCCEEEEECCCCCCCHHCCCC >Mature Secondary Structure MKKKYINQIHTDVSFKPKDIIGLINDYFKMKSKLRPIKNLPIVLSNKDNESLESVTWFGH CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHEEEECC SASLLKIEGKTLLLDPMFGDASSPFPLFNSKRYSGAFSLEREDLQEIDAIIISHNHYDHL CCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHEEEEECCCCCCC NYKSIMRLKDRAKHFYVPTGVAQYLMKWGVSPSKISEHNWWDEIMLDAIKLVCAPARHFS CHHHHHHHHHHCCEEECCHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCC GRGMTDRDCSLWCSWLILGQETKVFFSGDSGYAPHFKEIGDKYGPFDLTLMECGQYDPRW CCCCCCCCHHHEEEEEEECCCEEEEEECCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCC SAIHMLPEETVQAHIDVKGELLLPIHWGAFTLALHEWSDPIERVTKEANRFLGVKITTPQ EEEEECCHHHHEEEEEECCCEEEEEECCEEEEEEHHHCCHHHHHHHHHHHEEEEEEECCC IGESITLKSTDYPRYAWWQKV CCCEEEEECCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]