| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is pbpA [H]
Identifier: 118477908
GI number: 118477908
Start: 2412266
End: 2414398
Strand: Direct
Name: pbpA [H]
Synonym: BALH_2253
Alternate gene names: 118477908
Gene position: 2412266-2414398 (Clockwise)
Preceding gene: 118477906
Following gene: 118477909
Centisome position: 45.89
GC content: 33.9
Gene sequence:
>2133_bases ATGAAAGAACAAAAAGGAAAGAAGCAGAAGACATATATATCTATTCGATTAAATATAATGTTCCTTTGCATATTTTTACT ATTCTCAGCTATTATTATGCAGCTAGGAAAAGTACAAATCGTTGAGGGAGAGGCTTATAAGAATCAAGTGGAAAACAGTC AAAATGCAACAACTAGCATTCCAGTTCCGCGTGGACAGATTTTAGATCGAGAAGGGAAAACGGTCGTTAATAATAAGTCT CTTCGTACAATTACGTATACAAGGGTGAAGGGGATTACGAGTGACGATATTTTAAAAACAGCAAAAGACTTGGCAAAAGT ACTTGAAATGCCTGAACAAGATATAAACAAATTAACAGATATCGATAAAAAAGATTTTTGGATGCAGTTGAATACGAAAC GTGCGGAAGCAATGATTACGAAAAAAGATATAGAAAAGTTTAAAGAAAAGGGAATAGAGGGAAAAGAGTTAGATAAAAAA ATAGAAGAATTAAGACGAAGTCGAGTTACAGAAGTAGAATTGGCAGAATTAACAGCACAAGATTTAAAGGTGTTAGCTAT TAAAAGTAAAATGAATTCAGGTTATCAACTGACACCACAAATTATAAAAAAAGATGTAACAAATCAAGAGTATGCGCAAA TCAGTGAAAATCTTGCGGAGTTTCCTGGGGTAGATGCAACAGTTGATTGGGAGCGCAATTATGTAAATGGTAATTTATTT CGTTCCGTGTTAGGTAATATTACGAGTAGCGAAGAAGGTCTGCCAAAAGAAAATTTAGATTTTTATTTAGTACGCGGATA TAACCGTAATGATCGTGTAGGGAAAAGTTATATTGAACAACGATATGAAGATGTGTTACATGGTACAAAAGAAGAAGTGA AAAATATTACAGATAAATCAGGAAATATTATAAATACAGAAATAATTTCTAAAGGAAAAAGTGGTAATAGTTTAACATTA ACGATTGATATGGAATTACAAAAGAAAGTGGAAGAAAGTTTAGAGAAAAATTTGAGAGCTTTTAAGAGTTCAGAGCCACT ATTGGACCGAGCTTTTGTTGTTATGACAAATCCGAATAACGGACAGATTTTATCTATGGCAGGCAAAAGGATTGTAGAAA AAGAAGGGAAAATGGAAATCGAGGATTTGGCATTAGGTAATATGACAACTTCGTATGAACTAGGGTCAGCTGTAAAAGGT GCAACTTTATTAACTGGATATGAGACAGGGGCAATACAACCAGGAGATCAATTTTATGATGCACCGATGAAATTTAAAGG TACACAAGCTAAGAAATCGTGGAATGTATCCGGATTTGGTAATATTAATGATTTACGAGCTCTACAAGTATCTTCGAATG TATACATGTTCCAAACAGCTTTAAAAATTGCGGGCGTTAATTACGTACCAAATGGTTCATTGGATATAAAACAAGAAGCA TTTAATACGATGCGCTATTATTTTAAGCAATTTGGCTTAGGAGTTCCTACGGGTATTGATTTACCGAATGAAATAATTGG ACAAACTAGAAAAGTAGATAGCCAGCCTGGTTTTTTACTAGATTTTTCTATCGGTCAGTATGATACGTATACGCCATTGC AATTAGCGCAATATATTTCAACAATTGCTAATGGCGGTTATAGAATGCAACCTCAAATTGTAAAAGAAATACGAGAGCAA TCAATAAAAGAAGAGGTTGGCAAAGTTATTCGCTCAATAGAGCCTGTCGTATTAAATCGAATTGATATGAAGACAGAACA TATTAATCGAATAAAAGAAGGCTTTAGATGGGTATTCCAAGAAGGTGATGGAACTGGCGTGAAGTATTTCAAAAATGCTT CATATAAACCAGCAGGAAAGACAGGAACAGCTCAAACTGTATATGGTGGAGATGATCCAATTGGTAGAAATGCAAAAGGA GAACGTATGGAATGCTACAACTTAACGTTAGTTGGATATGCTCCATATGATAATCCAGAAGTAGCATTCTCAGTAGTAGT TCCGTGGCTTCGTAACGATAAAAGTGGAATTAATTCTATAATTGGAAAAGAAGTTTTAGATGTATATTTTGATTTAAAAC AGCAACGTATAAATGGTGAAACTACTCATACAGATGTTCCGAATCAAAATTAG
Upstream 100 bases:
>100_bases AAAAAGATAAGACATTATTTATAACCGAATAATGGTTTGTAATATATAGGGAACGTTTAAGTATTAGTGAGAAGTTCCAG AAGAATTATATGGAGGATTT
Downstream 100 bases:
>100_bases AAAAACGTATACGCTTTTCTTATGGAAAGACATACTGTTTATATAAAGGTCTTTATAAAAGAAAAATGAGATTGGAAATA AGAGATAGCGACGATCATTG
Product: penicillin-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 710; Mature: 710
Protein sequence:
>710_residues MKEQKGKKQKTYISIRLNIMFLCIFLLFSAIIMQLGKVQIVEGEAYKNQVENSQNATTSIPVPRGQILDREGKTVVNNKS LRTITYTRVKGITSDDILKTAKDLAKVLEMPEQDINKLTDIDKKDFWMQLNTKRAEAMITKKDIEKFKEKGIEGKELDKK IEELRRSRVTEVELAELTAQDLKVLAIKSKMNSGYQLTPQIIKKDVTNQEYAQISENLAEFPGVDATVDWERNYVNGNLF RSVLGNITSSEEGLPKENLDFYLVRGYNRNDRVGKSYIEQRYEDVLHGTKEEVKNITDKSGNIINTEIISKGKSGNSLTL TIDMELQKKVEESLEKNLRAFKSSEPLLDRAFVVMTNPNNGQILSMAGKRIVEKEGKMEIEDLALGNMTTSYELGSAVKG ATLLTGYETGAIQPGDQFYDAPMKFKGTQAKKSWNVSGFGNINDLRALQVSSNVYMFQTALKIAGVNYVPNGSLDIKQEA FNTMRYYFKQFGLGVPTGIDLPNEIIGQTRKVDSQPGFLLDFSIGQYDTYTPLQLAQYISTIANGGYRMQPQIVKEIREQ SIKEEVGKVIRSIEPVVLNRIDMKTEHINRIKEGFRWVFQEGDGTGVKYFKNASYKPAGKTGTAQTVYGGDDPIGRNAKG ERMECYNLTLVGYAPYDNPEVAFSVVVPWLRNDKSGINSIIGKEVLDVYFDLKQQRINGETTHTDVPNQN
Sequences:
>Translated_710_residues MKEQKGKKQKTYISIRLNIMFLCIFLLFSAIIMQLGKVQIVEGEAYKNQVENSQNATTSIPVPRGQILDREGKTVVNNKS LRTITYTRVKGITSDDILKTAKDLAKVLEMPEQDINKLTDIDKKDFWMQLNTKRAEAMITKKDIEKFKEKGIEGKELDKK IEELRRSRVTEVELAELTAQDLKVLAIKSKMNSGYQLTPQIIKKDVTNQEYAQISENLAEFPGVDATVDWERNYVNGNLF RSVLGNITSSEEGLPKENLDFYLVRGYNRNDRVGKSYIEQRYEDVLHGTKEEVKNITDKSGNIINTEIISKGKSGNSLTL TIDMELQKKVEESLEKNLRAFKSSEPLLDRAFVVMTNPNNGQILSMAGKRIVEKEGKMEIEDLALGNMTTSYELGSAVKG ATLLTGYETGAIQPGDQFYDAPMKFKGTQAKKSWNVSGFGNINDLRALQVSSNVYMFQTALKIAGVNYVPNGSLDIKQEA FNTMRYYFKQFGLGVPTGIDLPNEIIGQTRKVDSQPGFLLDFSIGQYDTYTPLQLAQYISTIANGGYRMQPQIVKEIREQ SIKEEVGKVIRSIEPVVLNRIDMKTEHINRIKEGFRWVFQEGDGTGVKYFKNASYKPAGKTGTAQTVYGGDDPIGRNAKG ERMECYNLTLVGYAPYDNPEVAFSVVVPWLRNDKSGINSIIGKEVLDVYFDLKQQRINGETTHTDVPNQN >Mature_710_residues MKEQKGKKQKTYISIRLNIMFLCIFLLFSAIIMQLGKVQIVEGEAYKNQVENSQNATTSIPVPRGQILDREGKTVVNNKS LRTITYTRVKGITSDDILKTAKDLAKVLEMPEQDINKLTDIDKKDFWMQLNTKRAEAMITKKDIEKFKEKGIEGKELDKK IEELRRSRVTEVELAELTAQDLKVLAIKSKMNSGYQLTPQIIKKDVTNQEYAQISENLAEFPGVDATVDWERNYVNGNLF RSVLGNITSSEEGLPKENLDFYLVRGYNRNDRVGKSYIEQRYEDVLHGTKEEVKNITDKSGNIINTEIISKGKSGNSLTL TIDMELQKKVEESLEKNLRAFKSSEPLLDRAFVVMTNPNNGQILSMAGKRIVEKEGKMEIEDLALGNMTTSYELGSAVKG ATLLTGYETGAIQPGDQFYDAPMKFKGTQAKKSWNVSGFGNINDLRALQVSSNVYMFQTALKIAGVNYVPNGSLDIKQEA FNTMRYYFKQFGLGVPTGIDLPNEIIGQTRKVDSQPGFLLDFSIGQYDTYTPLQLAQYISTIANGGYRMQPQIVKEIREQ SIKEEVGKVIRSIEPVVLNRIDMKTEHINRIKEGFRWVFQEGDGTGVKYFKNASYKPAGKTGTAQTVYGGDDPIGRNAKG ERMECYNLTLVGYAPYDNPEVAFSVVVPWLRNDKSGINSIIGKEVLDVYFDLKQQRINGETTHTDVPNQN
Specific function: Cell Wall Formation; Pbp-2 Is Responsible For The Determination Of The Rod Shape Of The Cell. Its Synthesize Cross- Linked Peptidoglycan From The Lipid Intermediates. [C]
COG id: COG0768
COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI1786854, Length=719, Percent_Identity=23.643949930459, Blast_Score=135, Evalue=1e-32, Organism=Escherichia coli, GI1786272, Length=427, Percent_Identity=25.9953161592506, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR005311 - InterPro: IPR001460 [H]
Pfam domain/function: PF03717 PBP_dimer; PF00905 Transpeptidase [H]
EC number: NA
Molecular weight: Translated: 80034; Mature: 80034
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEQKGKKQKTYISIRLNIMFLCIFLLFSAIIMQLGKVQIVEGEAYKNQVENSQNATTSI CCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCCEEC PVPRGQILDREGKTVVNNKSLRTITYTRVKGITSDDILKTAKDLAKVLEMPEQDINKLTD CCCCCCEECCCCCEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHC IDKKDFWMQLNTKRAEAMITKKDIEKFKEKGIEGKELDKKIEELRRSRVTEVELAELTAQ CCCCHHEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH DLKVLAIKSKMNSGYQLTPQIIKKDVTNQEYAQISENLAEFPGVDATVDWERNYVNGNLF HHHEEEEEHHCCCCCEECHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHH RSVLGNITSSEEGLPKENLDFYLVRGYNRNDRVGKSYIEQRYEDVLHGTKEEVKNITDKS HHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC GNIINTEIISKGKSGNSLTLTIDMELQKKVEESLEKNLRAFKSSEPLLDRAFVVMTNPNN CCEEEHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC GQILSMAGKRIVEKEGKMEIEDLALGNMTTSYELGSAVKGATLLTGYETGAIQPGDQFYD CEEEEHHHHHHHHHCCCCCHHHEEECCCCCCHHHCCCCCCCEEEECCCCCCCCCCHHHHC APMKFKGTQAKKSWNVSGFGNINDLRALQVSSNVYMFQTALKIAGVNYVPNGSLDIKQEA CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHCCCCCCCCCCCHHHHH FNTMRYYFKQFGLGVPTGIDLPNEIIGQTRKVDSQPGFLLDFSIGQYDTYTPLQLAQYIS HHHHHHHHHHHCCCCCCCCCCCHHHHCCHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHH TIANGGYRMQPQIVKEIREQSIKEEVGKVIRSIEPVVLNRIDMKTEHINRIKEGFRWVFQ HHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEE EGDGTGVKYFKNASYKPAGKTGTAQTVYGGDDPIGRNAKGERMECYNLTLVGYAPYDNPE CCCCCCCHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCC VAFSVVVPWLRNDKSGINSIIGKEVLDVYFDLKQQRINGETTHTDVPNQN EEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKEQKGKKQKTYISIRLNIMFLCIFLLFSAIIMQLGKVQIVEGEAYKNQVENSQNATTSI CCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCCEEC PVPRGQILDREGKTVVNNKSLRTITYTRVKGITSDDILKTAKDLAKVLEMPEQDINKLTD CCCCCCEECCCCCEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHC IDKKDFWMQLNTKRAEAMITKKDIEKFKEKGIEGKELDKKIEELRRSRVTEVELAELTAQ CCCCHHEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH DLKVLAIKSKMNSGYQLTPQIIKKDVTNQEYAQISENLAEFPGVDATVDWERNYVNGNLF HHHEEEEEHHCCCCCEECHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHH RSVLGNITSSEEGLPKENLDFYLVRGYNRNDRVGKSYIEQRYEDVLHGTKEEVKNITDKS HHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC GNIINTEIISKGKSGNSLTLTIDMELQKKVEESLEKNLRAFKSSEPLLDRAFVVMTNPNN CCEEEHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC GQILSMAGKRIVEKEGKMEIEDLALGNMTTSYELGSAVKGATLLTGYETGAIQPGDQFYD CEEEEHHHHHHHHHCCCCCHHHEEECCCCCCHHHCCCCCCCEEEECCCCCCCCCCHHHHC APMKFKGTQAKKSWNVSGFGNINDLRALQVSSNVYMFQTALKIAGVNYVPNGSLDIKQEA CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHCCCCCCCCCCCHHHHH FNTMRYYFKQFGLGVPTGIDLPNEIIGQTRKVDSQPGFLLDFSIGQYDTYTPLQLAQYIS HHHHHHHHHHHCCCCCCCCCCCHHHHCCHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHH TIANGGYRMQPQIVKEIREQSIKEEVGKVIRSIEPVVLNRIDMKTEHINRIKEGFRWVFQ HHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEE EGDGTGVKYFKNASYKPAGKTGTAQTVYGGDDPIGRNAKGERMECYNLTLVGYAPYDNPE CCCCCCCHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCC VAFSVVVPWLRNDKSGINSIIGKEVLDVYFDLKQQRINGETTHTDVPNQN EEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]