Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is ypjC [H]
Identifier: 118477083
GI number: 118477083
Start: 1523526
End: 1524407
Strand: Reverse
Name: ypjC [H]
Synonym: BALH_1384
Alternate gene names: 118477083
Gene position: 1524407-1523526 (Counterclockwise)
Preceding gene: 118477100
Following gene: 118477054
Centisome position: 29.0
GC content: 34.47
Gene sequence:
>882_bases ATGACATCAAATTTGAAGATTCGAAATATCATTTTTATTTTAATCGGTTCCGCTATTTTTTCTTTCGGTATTGTGAATAT CAATATTGAAAATCACCTTGCAGAAGGTGGATTTACCGGTATTACACTATTATTGTATTTTCTATTTAAGTTTGATCCTT CTTATTCAAACTTAATTTTAAATATCCCTATATTTTTCATTGGTTGGAAATTACTTGGAAGAACAACGTTTATCTATACA CTAATCGGTACCTTTAGCGTATCTTTATTTCTATGGATTTTTCAGCGTTACGAAGTTCTCAACTTACATGTAAACTTACA AAATGATATGACACTCGCAGCTTTATTTGCTGGGGCATTTATTGGTATCGGTCTCGGGATCATATTTAAATACGGCGGAA CTACTGGCGGTGTAGATATTATTGCGAGACTCGCTCATAAGTATGTTGGCTGGAGTATGGGGAAAACGATGTTTATGTTT GATGCTATCGTCATTATCGTCTCTATCCTTACCTATTTATCATATCGCGAGGGTATGTATACGTTAGTTGCTGTTTTTAT CGGGGCGAAGGTCATTGATTTTATGCAAGAAGGAGCCTATGCAGCAAAAGGAGCAACTATTATCTCAGATAAAAACGATG AAATTGCTGCTAAAATTTTATCTGAGATGGAGCGCGGAGCAACCTTTTTAAAAGCTGTTGGATCGTATACAAAAGTGGAA CGGAACGTATTGTATTGCGTTGTTGCTAAAAATGAAATCGTGAAATTAAAAAATATTATTACTTCTGTAGATCCTCATGC ATTTGTTGCAGTAAGTGACGTACATGATGTAGTTGGTGAAGGTTTTACGTTGGATGAAAATAAAAACCCATTACATACAT AA
Upstream 100 bases:
>100_bases ATAGCCTTCACTATTTTCACTAGCAACTAGAAATTACTTATCATTATGTTTTACCGTTTCAGCGGAGCAATGCCATTTAC ATAATTAGGGGGATTTCTAT
Downstream 100 bases:
>100_bases ACATGACTAGAAAAGCTTTTTAGCTTTTCTAGTTTTTTATTACATATTGCTTAAGTTTCTCTAAATCCTCATAAATAAGC TCCAATAAGCTCCGATTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTSNLKIRNIIFILIGSAIFSFGIVNINIENHLAEGGFTGITLLLYFLFKFDPSYSNLILNIPIFFIGWKLLGRTTFIYT LIGTFSVSLFLWIFQRYEVLNLHVNLQNDMTLAALFAGAFIGIGLGIIFKYGGTTGGVDIIARLAHKYVGWSMGKTMFMF DAIVIIVSILTYLSYREGMYTLVAVFIGAKVIDFMQEGAYAAKGATIISDKNDEIAAKILSEMERGATFLKAVGSYTKVE RNVLYCVVAKNEIVKLKNIITSVDPHAFVAVSDVHDVVGEGFTLDENKNPLHT
Sequences:
>Translated_293_residues MTSNLKIRNIIFILIGSAIFSFGIVNINIENHLAEGGFTGITLLLYFLFKFDPSYSNLILNIPIFFIGWKLLGRTTFIYT LIGTFSVSLFLWIFQRYEVLNLHVNLQNDMTLAALFAGAFIGIGLGIIFKYGGTTGGVDIIARLAHKYVGWSMGKTMFMF DAIVIIVSILTYLSYREGMYTLVAVFIGAKVIDFMQEGAYAAKGATIISDKNDEIAAKILSEMERGATFLKAVGSYTKVE RNVLYCVVAKNEIVKLKNIITSVDPHAFVAVSDVHDVVGEGFTLDENKNPLHT >Mature_292_residues TSNLKIRNIIFILIGSAIFSFGIVNINIENHLAEGGFTGITLLLYFLFKFDPSYSNLILNIPIFFIGWKLLGRTTFIYTL IGTFSVSLFLWIFQRYEVLNLHVNLQNDMTLAALFAGAFIGIGLGIIFKYGGTTGGVDIIARLAHKYVGWSMGKTMFMFD AIVIIVSILTYLSYREGMYTLVAVFIGAKVIDFMQEGAYAAKGATIISDKNDEIAAKILSEMERGATFLKAVGSYTKVER NVLYCVVAKNEIVKLKNIITSVDPHAFVAVSDVHDVVGEGFTLDENKNPLHT
Specific function: Unknown
COG id: COG1284
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0750 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003740 - InterPro: IPR019264 [H]
Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]
EC number: NA
Molecular weight: Translated: 32477; Mature: 32345
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNLKIRNIIFILIGSAIFSFGIVNINIENHLAEGGFTGITLLLYFLFKFDPSYSNLIL CCCCCCHHHHHHHHHHHHHHHHCEEEEEEHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEE NIPIFFIGWKLLGRTTFIYTLIGTFSVSLFLWIFQRYEVLNLHVNLQNDMTLAALFAGAF ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHH IGIGLGIIFKYGGTTGGVDIIARLAHKYVGWSMGKTMFMFDAIVIIVSILTYLSYREGMY HHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHH TLVAVFIGAKVIDFMQEGAYAAKGATIISDKNDEIAAKILSEMERGATFLKAVGSYTKVE HHHHHHHHHHHHHHHHCCCCHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNVLYCVVAKNEIVKLKNIITSVDPHAFVAVSDVHDVVGEGFTLDENKNPLHT CCEEEEEEECCHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCEEECCCCCCCCC >Mature Secondary Structure TSNLKIRNIIFILIGSAIFSFGIVNINIENHLAEGGFTGITLLLYFLFKFDPSYSNLIL CCCCCHHHHHHHHHHHHHHHHCEEEEEEHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEE NIPIFFIGWKLLGRTTFIYTLIGTFSVSLFLWIFQRYEVLNLHVNLQNDMTLAALFAGAF ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHH IGIGLGIIFKYGGTTGGVDIIARLAHKYVGWSMGKTMFMFDAIVIIVSILTYLSYREGMY HHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHH TLVAVFIGAKVIDFMQEGAYAAKGATIISDKNDEIAAKILSEMERGATFLKAVGSYTKVE HHHHHHHHHHHHHHHHCCCCHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNVLYCVVAKNEIVKLKNIITSVDPHAFVAVSDVHDVVGEGFTLDENKNPLHT CCEEEEEEECCHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]