Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
---|---|
Accession | NC_008600 |
Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is ponA [H]
Identifier: 118477100
GI number: 118477100
Start: 1540316
End: 1543009
Strand: Reverse
Name: ponA [H]
Synonym: BALH_1401
Alternate gene names: 118477100
Gene position: 1543009-1540316 (Counterclockwise)
Preceding gene: 118477101
Following gene: 118477083
Centisome position: 29.35
GC content: 37.94
Gene sequence:
>2694_bases ATGTCAGATAATTATCGTTCTCGTACAGAACGAAATCATGTAAAAAATCAAAAGCAAGAAACAAATAAAGAAAAAAAACC AAAGAAAAAAGGCTCCTTTTTTAAAAAATTCCTTATAGGTTGTCTACTTCTTGGTATCGTTGGTCTTGTAGCTGGCGTTT CCGCTTTCTTTGTTATGGTGAAGGACGCTCCAAAATTAGACAAATCAAAACTTGTCAATCCTTTATCAACAAAGTTTCTT GATAAAGACGGGAACTTTTTCTATGAATACGGTGCTGAAAAACGAACCCATGTTACGTATGATCAAATTCCAAAGGTAGT TGAAAATGCATTCCTTGCAACTGAGGACTCACGTTTCTACGATCATAATGGGATTGATTTTAAACGAACTACAAAAGCAG TTATGGAAAATGTCACTGGAGGTTTCGGATCTCAAGGTGGTAGTACGATTACACAACAAGTAGTCAAAAACTATTTTCTA ACAATGGACAAAACTGCAAAGAGAAAAGTACAAGAATGGTACCTATCTTACAAATTAGAGCAACAATACTCTAAACATGA GATTTTAGAAATGTACTTAAATAAGATTAATTTAGGTAACCGTTCATATGGTATTGCGACAGCAGCACAAAAATATTATG GTAAAGATTTAAAAGACTTGCAATTACATGAAGCTGCTATGCTCGCTGGTTTACCCCAAGGTCCAAATATTTATGATCCA ACGAAAAAGGAAAATGTTGAACGAGCAACAAATCGTCGTAATGTCGTATTGTCATTAATGAATCGACATGGTTATATAAC AAAAGAAGAAATGAATAACGCAGTTAAGATCCCAGTAACAGAGGGTCTTCAACCGTCTTCAGAAATAACTGAGATGAAGT ATCAAGCATTTTTAGATGCGGTTGTAAAAGAAGTTGAAAAAGAATATCCTGATGTAAATATTGGTTCAGATGGTTTAACG ATTCATACAACACTGGATCAAGATGCTCAAGATTATGCTGAAAAAATTATGGATGGCAATCTTATTAAATATCCAAACGA TCAATTCCAAGGATCATTCGTATTTATGGATACACAATCTGGAGAAGTTCGAGCAATTGGAGCTGGGCGTAAAGGAAGTA AGTCTACTTTCAAAGGTCATAATATGGCCACTGATTTAAAACGCCAAGTCGGTTCAACAATGAAACCAATTTTCGACTAC GGCCCAGCAATTGAAAATCTACAATGGTCTACATACCATCAATTAAATGACTCAGAGTATACGTATTCCAATGGGAAAAA GATACGAAATGCAACAAATAGTTACAAAGGTGACGTTTCACTACGTGAAGCTTTGAAAAAGTCATTAAACATCCCAGCTT TAAAAACAGCCCAAGCAGTTGGTCTTCCTAAGTCACAAGCGTTTGCTGAAGGTTTAGGTATGACATTTAAAGACGGCAAA ACATTTGAATCAACAGCAATTGGTAGTAACGATAGTTCTCCATTACAATTAGCGGGGGCATATGCAGCCTTTGGTAATGG TGGGAACTACAATAAACCGCACTTCGTAAAAGAAGTTACCTTCCCAGATGGGAAAAAGAAAAGTTTTAAACCGAAAGAAC AACGTGCGATGCAAGACTACACAGCTTACATGGTGACTGACGTTCTTCGTGATGTCGTAAAACCTGGTTCTGGCGGTACT GGTCCAACAGCATACGTTTCAGGTGTTGATGTTGCCGGTAAAACAGGAACACAAAACTTTGATGCAGACGTTATAAAAGA ATATGGTATTCCAGCTGATGCAAACAGAGATAGCTGGTTCGCTGGATATACACCGCAATATACAATGGCAGTATGGACTG GGTACGAAAAAAATGGCCCAGAAAACTATATTAGTGATCGTTATACTAGAATTGCACAGCAAATGTTCCAAGTAATGATG AGCAAATTCGCTACAGATAAAACTCGTTTCGAACGCCCTTCTTCTGTACAAGAAATAAACGGAGAGTTATATGTAAAAGG TGCGAAGAAAGATGCAATTAAACAAATTAAAGTAGATGCACCTAGTGGTCTTAATGTCACTTTCGATGGCGCTAGCACAG TTACACTAAACTGGTCTGGACCAACAGAAGTTGATGCGTATGCAGCAAGCTATAAAGCGACTGACGGTTCAAGTGGTAGT TTATCAGTAAAAGGTACAACAGCTACTCTTGGTGGTATTAAACCAGGCGTTACTTACAGCTTCTCTGTAGTAGCGAAAAA AGGTACTGGAACAAGCCCTGCAGTTGGAGCATCCTTCACTGCGCCTGGCGGAACTCCAGACGCGAAGAAAGCCGAGGAAG AAGCTAAGAAGAAGGCTGAAGAAGAAGCTAAGAAAAAAGCTGATGAGGAAGCTCAGAAAAAGGCCAATGAAGATAAACTA AAACAAGAAGAAGCTACTAAAAAAGCTGAAGAAGAAGCTAAGAAACAACAAGAACAACAACGTAAACAGCAAGAAGAAGC TCAAAAGAAAGCTGAAGAGGAAGCTAGAAAAAAAGCTGAAGAAGAAGCTAAGAAACAGCAAGAAGAGGCTCAAAAGAAAG CTGAAGAGGAAGCTAGAAAAAAAGCTGAAGAAGAAGCTAAAAAACAACAAGAGCAACAGCAGCAAGAACAACAACAAAAT ACCGGAGGAGATACACCTCACGCAGACGGAAATTTTGTTACAACAGAGTCTTAA
Upstream 100 bases:
>100_bases ATATCCGTGTACTAGACACGGTTTATTTTTCGTGATAGAGTCATCACTAAGGCTCTTTTTTCGACTTTTGGGGAGAGAAT GAAAGGTAGGAGAAAGTATA
Downstream 100 bases:
>100_bases TACAAAAAAAGAAGTCCTTTCTCTTAACGAGAACAGGACTTCTTTTTTGTTATCATTTTCTTTACATATAGCTTTTCTAT TTCAATATACAACTGTGCTA
Product: penicillin-binding protein
Products: NA
Alternate protein names: PBP1; Penicillin-insensitive transglycosylase; Peptidoglycan TGase; Penicillin-sensitive transpeptidase; DD-transpeptidase [H]
Number of amino acids: Translated: 897; Mature: 896
Protein sequence:
>897_residues MSDNYRSRTERNHVKNQKQETNKEKKPKKKGSFFKKFLIGCLLLGIVGLVAGVSAFFVMVKDAPKLDKSKLVNPLSTKFL DKDGNFFYEYGAEKRTHVTYDQIPKVVENAFLATEDSRFYDHNGIDFKRTTKAVMENVTGGFGSQGGSTITQQVVKNYFL TMDKTAKRKVQEWYLSYKLEQQYSKHEILEMYLNKINLGNRSYGIATAAQKYYGKDLKDLQLHEAAMLAGLPQGPNIYDP TKKENVERATNRRNVVLSLMNRHGYITKEEMNNAVKIPVTEGLQPSSEITEMKYQAFLDAVVKEVEKEYPDVNIGSDGLT IHTTLDQDAQDYAEKIMDGNLIKYPNDQFQGSFVFMDTQSGEVRAIGAGRKGSKSTFKGHNMATDLKRQVGSTMKPIFDY GPAIENLQWSTYHQLNDSEYTYSNGKKIRNATNSYKGDVSLREALKKSLNIPALKTAQAVGLPKSQAFAEGLGMTFKDGK TFESTAIGSNDSSPLQLAGAYAAFGNGGNYNKPHFVKEVTFPDGKKKSFKPKEQRAMQDYTAYMVTDVLRDVVKPGSGGT GPTAYVSGVDVAGKTGTQNFDADVIKEYGIPADANRDSWFAGYTPQYTMAVWTGYEKNGPENYISDRYTRIAQQMFQVMM SKFATDKTRFERPSSVQEINGELYVKGAKKDAIKQIKVDAPSGLNVTFDGASTVTLNWSGPTEVDAYAASYKATDGSSGS LSVKGTTATLGGIKPGVTYSFSVVAKKGTGTSPAVGASFTAPGGTPDAKKAEEEAKKKAEEEAKKKADEEAQKKANEDKL KQEEATKKAEEEAKKQQEQQRKQQEEAQKKAEEEARKKAEEEAKKQQEEAQKKAEEEARKKAEEEAKKQQEQQQQEQQQN TGGDTPHADGNFVTTES
Sequences:
>Translated_897_residues MSDNYRSRTERNHVKNQKQETNKEKKPKKKGSFFKKFLIGCLLLGIVGLVAGVSAFFVMVKDAPKLDKSKLVNPLSTKFL DKDGNFFYEYGAEKRTHVTYDQIPKVVENAFLATEDSRFYDHNGIDFKRTTKAVMENVTGGFGSQGGSTITQQVVKNYFL TMDKTAKRKVQEWYLSYKLEQQYSKHEILEMYLNKINLGNRSYGIATAAQKYYGKDLKDLQLHEAAMLAGLPQGPNIYDP TKKENVERATNRRNVVLSLMNRHGYITKEEMNNAVKIPVTEGLQPSSEITEMKYQAFLDAVVKEVEKEYPDVNIGSDGLT IHTTLDQDAQDYAEKIMDGNLIKYPNDQFQGSFVFMDTQSGEVRAIGAGRKGSKSTFKGHNMATDLKRQVGSTMKPIFDY GPAIENLQWSTYHQLNDSEYTYSNGKKIRNATNSYKGDVSLREALKKSLNIPALKTAQAVGLPKSQAFAEGLGMTFKDGK TFESTAIGSNDSSPLQLAGAYAAFGNGGNYNKPHFVKEVTFPDGKKKSFKPKEQRAMQDYTAYMVTDVLRDVVKPGSGGT GPTAYVSGVDVAGKTGTQNFDADVIKEYGIPADANRDSWFAGYTPQYTMAVWTGYEKNGPENYISDRYTRIAQQMFQVMM SKFATDKTRFERPSSVQEINGELYVKGAKKDAIKQIKVDAPSGLNVTFDGASTVTLNWSGPTEVDAYAASYKATDGSSGS LSVKGTTATLGGIKPGVTYSFSVVAKKGTGTSPAVGASFTAPGGTPDAKKAEEEAKKKAEEEAKKKADEEAQKKANEDKL KQEEATKKAEEEAKKQQEQQRKQQEEAQKKAEEEARKKAEEEAKKQQEEAQKKAEEEARKKAEEEAKKQQEQQQQEQQQN TGGDTPHADGNFVTTES >Mature_896_residues SDNYRSRTERNHVKNQKQETNKEKKPKKKGSFFKKFLIGCLLLGIVGLVAGVSAFFVMVKDAPKLDKSKLVNPLSTKFLD KDGNFFYEYGAEKRTHVTYDQIPKVVENAFLATEDSRFYDHNGIDFKRTTKAVMENVTGGFGSQGGSTITQQVVKNYFLT MDKTAKRKVQEWYLSYKLEQQYSKHEILEMYLNKINLGNRSYGIATAAQKYYGKDLKDLQLHEAAMLAGLPQGPNIYDPT KKENVERATNRRNVVLSLMNRHGYITKEEMNNAVKIPVTEGLQPSSEITEMKYQAFLDAVVKEVEKEYPDVNIGSDGLTI HTTLDQDAQDYAEKIMDGNLIKYPNDQFQGSFVFMDTQSGEVRAIGAGRKGSKSTFKGHNMATDLKRQVGSTMKPIFDYG PAIENLQWSTYHQLNDSEYTYSNGKKIRNATNSYKGDVSLREALKKSLNIPALKTAQAVGLPKSQAFAEGLGMTFKDGKT FESTAIGSNDSSPLQLAGAYAAFGNGGNYNKPHFVKEVTFPDGKKKSFKPKEQRAMQDYTAYMVTDVLRDVVKPGSGGTG PTAYVSGVDVAGKTGTQNFDADVIKEYGIPADANRDSWFAGYTPQYTMAVWTGYEKNGPENYISDRYTRIAQQMFQVMMS KFATDKTRFERPSSVQEINGELYVKGAKKDAIKQIKVDAPSGLNVTFDGASTVTLNWSGPTEVDAYAASYKATDGSSGSL SVKGTTATLGGIKPGVTYSFSVVAKKGTGTSPAVGASFTAPGGTPDAKKAEEEAKKKAEEEAKKKADEEAQKKANEDKLK QEEATKKAEEEAKKQQEQQRKQQEEAQKKAEEEARKKAEEEAKKQQEEAQKKAEEEARKKAEEEAKKQQEQQQQEQQQNT GGDTPHADGNFVTTES
Specific function: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal
COG id: COG0744
COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=Probably found all over the whole cell at low concentrations. Also localizes to the division site in vegetative cells [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fibronectin type-III domain [H]
Homologues:
Organism=Escherichia coli, GI1786343, Length=548, Percent_Identity=31.021897810219, Blast_Score=216, Evalue=4e-57, Organism=Escherichia coli, GI87082258, Length=318, Percent_Identity=38.3647798742138, Blast_Score=210, Evalue=3e-55, Organism=Escherichia coli, GI1788867, Length=603, Percent_Identity=27.0315091210614, Blast_Score=142, Evalue=9e-35, Organism=Escherichia coli, GI1789601, Length=204, Percent_Identity=32.843137254902, Blast_Score=90, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR008957 - InterPro: IPR003961 - InterPro: IPR001264 - InterPro: IPR013783 - InterPro: IPR011816 - InterPro: IPR001460 [H]
Pfam domain/function: PF00041 fn3; PF00912 Transgly; PF00905 Transpeptidase [H]
EC number: 2.4.1.129; 3.4.-.- [C]
Molecular weight: Translated: 99549; Mature: 99418
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNYRSRTERNHVKNQKQETNKEKKPKKKGSFFKKFLIGCLLLGIVGLVAGVSAFFVMV CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KDAPKLDKSKLVNPLSTKFLDKDGNFFYEYGAEKRTHVTYDQIPKVVENAFLATEDSRFY CCCCCCCHHHCCCHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCC DHNGIDFKRTTKAVMENVTGGFGSQGGSTITQQVVKNYFLTMDKTAKRKVQEWYLSYKLE CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH QQYSKHEILEMYLNKINLGNRSYGIATAAQKYYGKDLKDLQLHEAAMLAGLPQGPNIYDP HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC TKKENVERATNRRNVVLSLMNRHGYITKEEMNNAVKIPVTEGLQPSSEITEMKYQAFLDA CHHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHH VVKEVEKEYPDVNIGSDGLTIHTTLDQDAQDYAEKIMDGNLIKYPNDQFQGSFVFMDTQS HHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCC GEVRAIGAGRKGSKSTFKGHNMATDLKRQVGSTMKPIFDYGPAIENLQWSTYHQLNDSEY CCEEEEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHCCCCCCE TYSNGKKIRNATNSYKGDVSLREALKKSLNIPALKTAQAVGLPKSQAFAEGLGMTFKDGK EECCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCEECCCC TFESTAIGSNDSSPLQLAGAYAAFGNGGNYNKPHFVKEVTFPDGKKKSFKPKEQRAMQDY CCHHHCCCCCCCCCCEEHHHHHEECCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH TAYMVTDVLRDVVKPGSGGTGPTAYVSGVDVAGKTGTQNFDADVIKEYGIPADANRDSWF HHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEE AGYTPQYTMAVWTGYEKNGPENYISDRYTRIAQQMFQVMMSKFATDKTRFERPSSVQEIN CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHCC GELYVKGAKKDAIKQIKVDAPSGLNVTFDGASTVTLNWSGPTEVDAYAASYKATDGSSGS CEEEEECCCHHHHHHEEECCCCCCEEEECCCEEEEEECCCCCCHHHHHHHCCCCCCCCCE LSVKGTTATLGGIKPGVTYSFSVVAKKGTGTSPAVGASFTAPGGTPDAKKAEEEAKKKAE EEEECCEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH EEAKKKADEEAQKKANEDKLKQEEATKKAEEEAKKQQEQQRKQQEEAQKKAEEEARKKAE HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEAKKQQEEAQKKAEEEARKKAEEEAKKQQEQQQQEQQQNTGGDTPHADGNFVTTES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCC >Mature Secondary Structure SDNYRSRTERNHVKNQKQETNKEKKPKKKGSFFKKFLIGCLLLGIVGLVAGVSAFFVMV CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KDAPKLDKSKLVNPLSTKFLDKDGNFFYEYGAEKRTHVTYDQIPKVVENAFLATEDSRFY CCCCCCCHHHCCCHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCC DHNGIDFKRTTKAVMENVTGGFGSQGGSTITQQVVKNYFLTMDKTAKRKVQEWYLSYKLE CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH QQYSKHEILEMYLNKINLGNRSYGIATAAQKYYGKDLKDLQLHEAAMLAGLPQGPNIYDP HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC TKKENVERATNRRNVVLSLMNRHGYITKEEMNNAVKIPVTEGLQPSSEITEMKYQAFLDA CHHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHH VVKEVEKEYPDVNIGSDGLTIHTTLDQDAQDYAEKIMDGNLIKYPNDQFQGSFVFMDTQS HHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCC GEVRAIGAGRKGSKSTFKGHNMATDLKRQVGSTMKPIFDYGPAIENLQWSTYHQLNDSEY CCEEEEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHCCCCCCE TYSNGKKIRNATNSYKGDVSLREALKKSLNIPALKTAQAVGLPKSQAFAEGLGMTFKDGK EECCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCEECCCC TFESTAIGSNDSSPLQLAGAYAAFGNGGNYNKPHFVKEVTFPDGKKKSFKPKEQRAMQDY CCHHHCCCCCCCCCCEEHHHHHEECCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH TAYMVTDVLRDVVKPGSGGTGPTAYVSGVDVAGKTGTQNFDADVIKEYGIPADANRDSWF HHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEE AGYTPQYTMAVWTGYEKNGPENYISDRYTRIAQQMFQVMMSKFATDKTRFERPSSVQEIN CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHCC GELYVKGAKKDAIKQIKVDAPSGLNVTFDGASTVTLNWSGPTEVDAYAASYKATDGSSGS CEEEEECCCHHHHHHEEECCCCCCEEEECCCEEEEEECCCCCCHHHHHHHCCCCCCCCCE LSVKGTTATLGGIKPGVTYSFSVVAKKGTGTSPAVGASFTAPGGTPDAKKAEEEAKKKAE EEEECCEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH EEAKKKADEEAQKKANEDKLKQEEATKKAEEEAKKQQEQQRKQQEEAQKKAEEEARKKAE HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEAKKQQEEAQKKAEEEARKKAEEEAKKQQEQQQQEQQQNTGGDTPHADGNFVTTES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7814321; 8760912; 9384377; 9721295; 10322023 [H]