| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yhxC [H]
Identifier: 118476423
GI number: 118476423
Start: 796234
End: 797112
Strand: Direct
Name: yhxC [H]
Synonym: BALH_0686
Alternate gene names: 118476423
Gene position: 796234-797112 (Clockwise)
Preceding gene: 118476421
Following gene: 118476424
Centisome position: 15.15
GC content: 38.68
Gene sequence:
>879_bases TTGAAAGAAACTATGCCGCAGCAAAAAAACTTTGTAACAATGCCGGCGCAACATCAAAATAAACAGCCTGGCATTGAATC ATTAATGAATCCTCTACCGCAGTTTGAAGATCCAAATTATAAAGGAAGCGAAAAGTTAAAAGGAAAGAATGTATTAATTA CAGGTGGAGATAGCGGAATTGGACGAGCTGTTTCTATCGCTTTTGCGAAAGAGGGAGCAAATATTGCGATTGCGTATTTA GATGAGGAGGGGGATGCAAATGAGACGAAACAATATGTTGAGAAAGAAGGCGTAAAGTGCGTATTGTTGCCAGGTGATTT AAGTGATGAACAGCATTGTAAAGATATTGTACAAGAGACTGTCCGGCAGCTAGGTAGTTTGAATATTTTAGTAAATAATG TCGCACAGCAATATCCGCAGCAAGGACTAGAGTATATTACAGCAGAACAGCTAGAAAAGACTTTTCGTATTAATATTTTT TCTTATTTTCATGTTACAAAAGCAGCACTTTCTCATTTAAAGCAAGGGGATGTCATTATAAATACGGCATCTATCGTTGC ATATGAAGGAAATGAAACGTTAATTGATTATTCCGCAACGAAAGGAGCTATCGTTGCTTTCACACGATCGCTTTCTCAAT CGTTAGTGCAAAAAGGGATTCGTGTAAATGGTGTTGCGCCAGGACCAATTTGGACACCACTTATTCCATCAAGCTTTGAT GAGAAAAAGGTATCACAGTTTGGGAGCAATGTTCCGATGCAAAGACCTGGTCAACCATATGAATTAGCGCCAGCATATGT ATATTTAGCGTCTAGTGATTCATCCTATGTTACCGGGCAAATGATACATGTAAATGGGGGCGTTATTGTAAATGGATAG
Upstream 100 bases:
>100_bases AGTTTACAACAATTCATATTTTGTGTCTTAAATTCGAATATTAATCGTAATATGATGTGCGAATTTCAGTTTTTATTATG CACATTATAAGAAAAAGGAG
Downstream 100 bases:
>100_bases TTTTCATTTATAAGAGCAAAGTAAAGTTAATTCCACTTATTATAGTGAGCGCTAGGGGGATATAAATGAAAAAGTTATGT TTCATCATACTATTATTTTT
Product: short chain dehydrogenase
Products: NA
Alternate protein names: ORFX [H]
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MKETMPQQKNFVTMPAQHQNKQPGIESLMNPLPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYL DEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIF SYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD EKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVIVNG
Sequences:
>Translated_292_residues MKETMPQQKNFVTMPAQHQNKQPGIESLMNPLPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYL DEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIF SYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD EKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVIVNG >Mature_292_residues MKETMPQQKNFVTMPAQHQNKQPGIESLMNPLPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYL DEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIF SYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD EKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVIVNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI59889578, Length=233, Percent_Identity=34.3347639484979, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI15277342, Length=256, Percent_Identity=30.46875, Blast_Score=112, Evalue=3e-25, Organism=Homo sapiens, GI40254992, Length=239, Percent_Identity=32.6359832635983, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI4758504, Length=260, Percent_Identity=29.2307692307692, Blast_Score=104, Evalue=8e-23, Organism=Homo sapiens, GI32483357, Length=250, Percent_Identity=26.8, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=28.1746031746032, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI10190704, Length=250, Percent_Identity=27.2, Blast_Score=91, Evalue=9e-19, Organism=Homo sapiens, GI210032110, Length=206, Percent_Identity=31.0679611650485, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI31542939, Length=210, Percent_Identity=30, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI83715985, Length=260, Percent_Identity=26.9230769230769, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI5031737, Length=246, Percent_Identity=28.4552845528455, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI66933014, Length=255, Percent_Identity=30.1960784313725, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=28.1124497991968, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI142976729, Length=205, Percent_Identity=27.8048780487805, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4504505, Length=193, Percent_Identity=27.4611398963731, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI310128830, Length=272, Percent_Identity=24.2647058823529, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI310115468, Length=272, Percent_Identity=24.2647058823529, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI40807363, Length=200, Percent_Identity=27, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI126723750, Length=258, Percent_Identity=24.4186046511628, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI224922801, Length=171, Percent_Identity=30.4093567251462, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI109715829, Length=241, Percent_Identity=25.3112033195021, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1789378, Length=275, Percent_Identity=49.0909090909091, Blast_Score=259, Evalue=1e-70, Organism=Escherichia coli, GI2367175, Length=242, Percent_Identity=36.3636363636364, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=32.9317269076305, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1787905, Length=245, Percent_Identity=29.7959183673469, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=30.6122448979592, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1790717, Length=248, Percent_Identity=30.241935483871, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI1789208, Length=246, Percent_Identity=30.0813008130081, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI87082100, Length=256, Percent_Identity=30.859375, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=28.8065843621399, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI2367365, Length=245, Percent_Identity=31.0204081632653, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=26.4822134387352, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1787545, Length=253, Percent_Identity=23.3201581027668, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1787526, Length=255, Percent_Identity=23.5294117647059, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=34.9397590361446, Blast_Score=126, Evalue=1e-29, Organism=Caenorhabditis elegans, GI193204405, Length=261, Percent_Identity=35.2490421455939, Blast_Score=124, Evalue=8e-29, Organism=Caenorhabditis elegans, GI17561402, Length=254, Percent_Identity=31.496062992126, Blast_Score=122, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=33.7209302325581, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17551412, Length=263, Percent_Identity=32.6996197718631, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17562906, Length=260, Percent_Identity=31.9230769230769, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17555706, Length=249, Percent_Identity=33.3333333333333, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17562990, Length=258, Percent_Identity=31.7829457364341, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17562904, Length=266, Percent_Identity=31.203007518797, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17562908, Length=260, Percent_Identity=31.9230769230769, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=33.587786259542, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17560220, Length=262, Percent_Identity=31.6793893129771, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17538182, Length=256, Percent_Identity=30.078125, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI72000259, Length=263, Percent_Identity=31.9391634980989, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17563726, Length=260, Percent_Identity=31.5384615384615, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=30.9160305343511, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17559104, Length=257, Percent_Identity=32.295719844358, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17560676, Length=247, Percent_Identity=27.9352226720648, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=28.7878787878788, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=30.5343511450382, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71994600, Length=246, Percent_Identity=28.4552845528455, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71994604, Length=244, Percent_Identity=28.6885245901639, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17562910, Length=267, Percent_Identity=30.7116104868914, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=29.5019157088123, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17565030, Length=264, Percent_Identity=29.1666666666667, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=26.4822134387352, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17564282, Length=191, Percent_Identity=34.0314136125654, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17536651, Length=250, Percent_Identity=26, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17567345, Length=197, Percent_Identity=30.4568527918782, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI115534694, Length=245, Percent_Identity=26.1224489795918, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193203117, Length=187, Percent_Identity=30.4812834224599, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193203115, Length=207, Percent_Identity=28.5024154589372, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17508651, Length=248, Percent_Identity=26.2096774193548, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71982365, Length=199, Percent_Identity=29.1457286432161, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17561272, Length=237, Percent_Identity=25.3164556962025, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=257, Percent_Identity=25.6809338521401, Blast_Score=79, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6323882, Length=199, Percent_Identity=29.1457286432161, Blast_Score=76, Evalue=6e-15, Organism=Drosophila melanogaster, GI21355319, Length=252, Percent_Identity=30.5555555555556, Blast_Score=117, Evalue=9e-27, Organism=Drosophila melanogaster, GI24644339, Length=251, Percent_Identity=33.4661354581673, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=33.6, Blast_Score=107, Evalue=7e-24, Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=29.8387096774194, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=29.4354838709677, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=34.5528455284553, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI17737361, Length=252, Percent_Identity=29.3650793650794, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=29.3172690763052, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI24644337, Length=254, Percent_Identity=34.6456692913386, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI281364892, Length=183, Percent_Identity=26.2295081967213, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24640492, Length=177, Percent_Identity=25.4237288135593, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 31865; Mature: 31865
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKETMPQQKNFVTMPAQHQNKQPGIESLMNPLPQFEDPNYKGSEKLKGKNVLITGGDSGI CCCCCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCC GRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQET CCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVII HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHCCCCCEEE NTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD EEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCC EKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVIVNG HHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCEEEEC >Mature Secondary Structure MKETMPQQKNFVTMPAQHQNKQPGIESLMNPLPQFEDPNYKGSEKLKGKNVLITGGDSGI CCCCCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCC GRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQET CCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVII HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHCCCCCEEE NTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD EEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCC EKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVIVNG HHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 8196543 [H]