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The map label for this gene is yqjB [H]

Identifier: 118476424

GI number: 118476424

Start: 797178

End: 797939

Strand: Direct

Name: yqjB [H]

Synonym: BALH_0687

Alternate gene names: 118476424

Gene position: 797178-797939 (Clockwise)

Preceding gene: 118476423

Following gene: 118476437

Centisome position: 15.16

GC content: 34.12

Gene sequence:

>762_bases
ATGAAAAAGTTATGTTTCATCATACTATTATTTTTCATCCTACCGGTTAGTGCTTTTGCTAATACAGATCATTTAATATT
AGTGAATCTTACGACAAATCAGTTGTCTTTTTTTGAAAATGGAAATTATGCAAAAACATTCCCCGTAACAACTGGGAGAG
ATCGTACACCTACACCTGAAGGTAATTTTTGTATTATAACTAAATATAAAAATAAAGAATACCATCGAAAAAAAATAGCT
GGTGGTGCACCAAATAACCCTCTTGGTACGAGATGGCTTGGACTAGATAAGAATGAATATGCGATTCATGGGACAAATCG
GGAATGGACGATTGGAAGTAGGGAATCAAATGGATGTATTCGCATGCATGACAGGGATATACAGTGGTTATATGATCGAG
TCCAATTACAAACAAAAGTAATCATTTCTCGTTTTCATACGAGCCCCGAATATGAAGCGAATAAGCTTGGTTACCGCGTT
GTGAGTTGGAGTGGTCGTAAAATAGAAGAAGAGCAAATTGGTATACTTACGTTAGTAGACCGCGTGGATATATATTGGCA
AGAACCAAATGGGCAGTTAACGAAAGTGAAAACGGTATTACCAAACGAAAGATATGCAGTGTACTCAAAACGAAAAGATG
GAATATATTATATAGGAAACAATTTGTATATTATGGATGAAACAGGAGAAAAAATTCGTTATGAGCAAATTCCTTCTTCG
ATTTTAAGTAATATATATAAAAGGAAATATAATATTCCGTAA

Upstream 100 bases:

>100_bases
TACATGTAAATGGGGGCGTTATTGTAAATGGATAGTTTTCATTTATAAGAGCAAAGTAAAGTTAATTCCACTTATTATAG
TGAGCGCTAGGGGGATATAA

Downstream 100 bases:

>100_bases
TGGCTACCGTATTATAGACGGTAGCTTATTTCTACTTTGAGTTTAACTGCAACTATTGTATTTTGCTGAATATAATACAG
TACGGATAGGGGGGCGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKKLCFIILLFFILPVSAFANTDHLILVNLTTNQLSFFENGNYAKTFPVTTGRDRTPTPEGNFCIITKYKNKEYHRKKIA
GGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCIRMHDRDIQWLYDRVQLQTKVIISRFHTSPEYEANKLGYRV
VSWSGRKIEEEQIGILTLVDRVDIYWQEPNGQLTKVKTVLPNERYAVYSKRKDGIYYIGNNLYIMDETGEKIRYEQIPSS
ILSNIYKRKYNIP

Sequences:

>Translated_253_residues
MKKLCFIILLFFILPVSAFANTDHLILVNLTTNQLSFFENGNYAKTFPVTTGRDRTPTPEGNFCIITKYKNKEYHRKKIA
GGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCIRMHDRDIQWLYDRVQLQTKVIISRFHTSPEYEANKLGYRV
VSWSGRKIEEEQIGILTLVDRVDIYWQEPNGQLTKVKTVLPNERYAVYSKRKDGIYYIGNNLYIMDETGEKIRYEQIPSS
ILSNIYKRKYNIP
>Mature_253_residues
MKKLCFIILLFFILPVSAFANTDHLILVNLTTNQLSFFENGNYAKTFPVTTGRDRTPTPEGNFCIITKYKNKEYHRKKIA
GGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCIRMHDRDIQWLYDRVQLQTKVIISRFHTSPEYEANKLGYRV
VSWSGRKIEEEQIGILTLVDRVDIYWQEPNGQLTKVKTVLPNERYAVYSKRKDGIYYIGNNLYIMDETGEKIRYEQIPSS
ILSNIYKRKYNIP

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 29527; Mature: 29527

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLCFIILLFFILPVSAFANTDHLILVNLTTNQLSFFENGNYAKTFPVTTGRDRTPTPE
CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCEEEEECCCCCCCCCCCCC
GNFCIITKYKNKEYHRKKIAGGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCI
CCEEEEEEECCCHHHHHHHCCCCCCCCCCCEEECCCCCCEEEECCCCEEEECCCCCCCEE
RMHDRDIQWLYDRVQLQTKVIISRFHTSPEYEANKLGYRVVSWSGRKIEEEQIGILTLVD
EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEECHHHCCEEEEEE
RVDIYWQEPNGQLTKVKTVLPNERYAVYSKRKDGIYYIGNNLYIMDETGEKIRYEQIPSS
EEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEECCEEEEECCCCCEEEHHHHHHH
ILSNIYKRKYNIP
HHHHHHHHCCCCC
>Mature Secondary Structure
MKKLCFIILLFFILPVSAFANTDHLILVNLTTNQLSFFENGNYAKTFPVTTGRDRTPTPE
CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCEEEEECCCCCCCCCCCCC
GNFCIITKYKNKEYHRKKIAGGAPNNPLGTRWLGLDKNEYAIHGTNREWTIGSRESNGCI
CCEEEEEEECCCHHHHHHHCCCCCCCCCCCEEECCCCCCEEEECCCCEEEECCCCCCCEE
RMHDRDIQWLYDRVQLQTKVIISRFHTSPEYEANKLGYRVVSWSGRKIEEEQIGILTLVD
EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEECHHHCCEEEEEE
RVDIYWQEPNGQLTKVKTVLPNERYAVYSKRKDGIYYIGNNLYIMDETGEKIRYEQIPSS
EEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEECCEEEEECCCCCEEEHHHHHHH
ILSNIYKRKYNIP
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]