| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is cyoB [H]
Identifier: 118476380
GI number: 118476380
Start: 740710
End: 742653
Strand: Reverse
Name: cyoB [H]
Synonym: BALH_0638
Alternate gene names: 118476380
Gene position: 742653-740710 (Counterclockwise)
Preceding gene: 118476381
Following gene: 118476379
Centisome position: 14.13
GC content: 40.95
Gene sequence:
>1944_bases GTGAACACAGTGAAGCTTGATGAATTCTTTGTCACAGGTGACCCGATTATTTACGGTGCAGACGCTTCTATCGTTCTTGT GACATTAGCAATCATTTTCGTACTAACAAAGTATAAAAAATGGAAATGGCTTTGGGACGAATGGTTAACAACTGTTGACC ATAAAAAGATTGGGGCCATGTATATTATCTCTGCGGTTATTATGTTATTCCGTGGTGGTATGGACGGTTTAATGATCCGT GCACAGTTAACATTCCCAGAAACAACTTATTTAAACGCTGAACACTATAACGGAATCTTCACAACACACGGTACAGTTAT GATTCTTTTCATGGCGATGCCATTCGTTATGGGATTAATGAACCTTGTAGTACCATTACAAATTGGTGCTCGTGACGTTG CATATCCGTTCTTAAATGCTTTAAGTTTCTGGTTATTCTTTGTCGGAGCAATGTTATTCAACATCGCATTCGTAATTGGT GGTTCTCCAGACGCTGGGTGGACTTCTTACTTCCCAATGGCAGGTACAGAGTTTACTTCTGGTGTAGGAAATAACTACTA CGCAATTGCATTACAGATTTCAGGTCTCGGTACGTTAATGACAGGTATTAACTTCCTTGTTACTATCTTAAAAATGCGTA CACCTGGTATGACTTTAATGAGAATGCCAATGTTTACTTGGTCAATCTTAATTACAACGATTATCATTATTTTCGCTTTC CCAGTATTAACAGTTGCTCTTGCATTAATGACATTTGACCGTCTATTCGATGCTCACTTCTTTACGATGGCGAGCGGCGG TATGCCAATGTTATGGGCCAACCTGTTCTGGGTATGGGGTCACCCTGAAGTATATATCGTTATTTTACCGGCATTCGGTA TTTTCTCTGAAATCATTAGTACATTCTCACGTAAGCGTCTATTCGGTTACAGTGCGATGGTATACTCAATGGTTGCAATT TCTTTACTAAGTTTCGTCGTATGGCTTCACCACTTCTTCACGATGGGTGCAGGTCCAGCGGTTAACTCATTCTTCTCGAT TTCGACAATGGCGATTTCGATTCCAACCGGGGTTAAGATCTTTAACTGGTTGTTTACACTGTATAAAGGACGTATTCGTT TTACAGTTCCAATGCTTTGGTCATTGGCATTTATTCCAAACTTCGTAGTCGGTGGGGTTACAGGGGTTATGCTTGGTATG GCAGCAGCTGATTATCAGTACCATAACAGCTACTTCCTAATCGCTCACTTCCACTACGTATTAATTGCAGGTACAGTATT CGCTATGCTTGCTGGATTCACATTCTGGTATCCAAAAATGACTGGTCATATGTTAAATGAACGCCTAGGTAAATGGACAT TCTGGATCTTTATGAGCGGATTCAACATCTGTTTCTTCCCAATGTACTTCTTAGGTTTAGATGGTATGACTCGTCGTATG TACACTTACTCTGAAAGTCTTGGATGGGGATGGCTAAACCAAATCGCATCTGTTGGTGCGGTAATGATGGGTATCGGCTT CCTACTTCTTTGCTACAACGTAATTTGGAGTGCTCGTCACGGTGAACGTGACACAACTGGAGATCCATGGGACGGCCGTA CACTTGAATGGGCAACTCAATCTCCTGTACAACATTACAACTTCGCGAAACTTCCTGAAATCAAAGAAGCTGATGCTTTC TGGTACATGAAAAAACGCGGAGAAACAGTTACACCAGCAGCAGAAGATATCAAACCAATTCACATGCCAAGTAACTCTGG TGTGCCTATTATTGCGTCTGGATTCTTCGGTCTTGCAGGTTTCGCATTAGTATTTAGCTGGTTCTGGCTTGCAGCAATCG GCGGCATTGGTATTTTAGCTTGCTTAATCTATCGTTCATTCGATTATGATGAAGGTTACTATATTAGTGTTGATGAAATT AAAAAATCAGAACATGTAGCATGA
Upstream 100 bases:
>100_bases TAGCCATCACTTAAGTTATGTAGATCCAAAATCACTTGAATATTGTGATTACAACTACTACAAAAACAAAAAATAATAGC TATAATTCCAACAGATTGGA
Downstream 100 bases:
>100_bases GAGGTGAAATGATATGGCGGCTTTAGATAAAAGCTTACCTTTGGAATATCAATCCGAACAAAGCAGATTGAATATCCTAG GATTCTGGATTTTTCTTGGG
Product: quinol oxidase, subunit 1 (cytochrome c oxidase, subunit I)
Products: ferricytochrome c; H2O
Alternate protein names: Oxidase aa(3)-600 subunit 1; Quinol oxidase aa3-600, subunit qoxB; Quinol oxidase polypeptide I [H]
Number of amino acids: Translated: 647; Mature: 647
Protein sequence:
>647_residues MNTVKLDEFFVTGDPIIYGADASIVLVTLAIIFVLTKYKKWKWLWDEWLTTVDHKKIGAMYIISAVIMLFRGGMDGLMIR AQLTFPETTYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVVPLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIG GSPDAGWTSYFPMAGTEFTSGVGNNYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAF PVLTVALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSRKRLFGYSAMVYSMVAI SLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWLFTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGM AAADYQYHNSYFLIAHFHYVLIAGTVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRM YTYSESLGWGWLNQIASVGAVMMGIGFLLLCYNVIWSARHGERDTTGDPWDGRTLEWATQSPVQHYNFAKLPEIKEADAF WYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASGFFGLAGFALVFSWFWLAAIGGIGILACLIYRSFDYDEGYYISVDEI KKSEHVA
Sequences:
>Translated_647_residues MNTVKLDEFFVTGDPIIYGADASIVLVTLAIIFVLTKYKKWKWLWDEWLTTVDHKKIGAMYIISAVIMLFRGGMDGLMIR AQLTFPETTYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVVPLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIG GSPDAGWTSYFPMAGTEFTSGVGNNYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAF PVLTVALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSRKRLFGYSAMVYSMVAI SLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWLFTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGM AAADYQYHNSYFLIAHFHYVLIAGTVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRM YTYSESLGWGWLNQIASVGAVMMGIGFLLLCYNVIWSARHGERDTTGDPWDGRTLEWATQSPVQHYNFAKLPEIKEADAF WYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASGFFGLAGFALVFSWFWLAAIGGIGILACLIYRSFDYDEGYYISVDEI KKSEHVA >Mature_647_residues MNTVKLDEFFVTGDPIIYGADASIVLVTLAIIFVLTKYKKWKWLWDEWLTTVDHKKIGAMYIISAVIMLFRGGMDGLMIR AQLTFPETTYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVVPLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIG GSPDAGWTSYFPMAGTEFTSGVGNNYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAF PVLTVALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSRKRLFGYSAMVYSMVAI SLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWLFTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGM AAADYQYHNSYFLIAHFHYVLIAGTVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRM YTYSESLGWGWLNQIASVGAVMMGIGFLLLCYNVIWSARHGERDTTGDPWDGRTLEWATQSPVQHYNFAKLPEIKEADAF WYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASGFFGLAGFALVFSWFWLAAIGGIGILACLIYRSFDYDEGYYISVDEI KKSEHVA
Specific function: Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Major component for energy conversion during vegetative growth [H]
COG id: COG0843
COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 1
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heme-copper respiratory oxidase family [H]
Homologues:
Organism=Homo sapiens, GI251831109, Length=513, Percent_Identity=38.401559454191, Blast_Score=348, Evalue=1e-95, Organism=Escherichia coli, GI1786634, Length=637, Percent_Identity=53.0612244897959, Blast_Score=669, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6226519, Length=470, Percent_Identity=39.3617021276596, Blast_Score=364, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6226524, Length=322, Percent_Identity=38.8198757763975, Blast_Score=241, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6226523, Length=246, Percent_Identity=32.1138211382114, Blast_Score=133, Evalue=9e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.9.3.1
Molecular weight: Translated: 73009; Mature: 73009
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTVKLDEFFVTGDPIIYGADASIVLVTLAIIFVLTKYKKWKWLWDEWLTTVDHKKIGAM CCCEEEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIISAVIMLFRGGMDGLMIRAQLTFPETTYLNAEHYNGIFTTHGTVMILFMAMPFVMGLM HHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCHHCCCEEECCHHHHHHHHHHHHHHHHH NLVVPLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHC GVGNNYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAF CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH PVLTVALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIIS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCCEEEEEEECHHHHHHHHHH TFSRKRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEECCCCHHH FNWLFTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYV HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEHHHHHHH LIAGTVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCHHHHH YTYSESLGWGWLNQIASVGAVMMGIGFLLLCYNVIWSARHGERDTTGDPWDGRTLEWATQ HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCC SPVQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASGFFGLAG CCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHCCCEEECCCCCCCCEEECHHHHHHH FALVFSWFWLAAIGGIGILACLIYRSFDYDEGYYISVDEIKKSEHVA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCC >Mature Secondary Structure MNTVKLDEFFVTGDPIIYGADASIVLVTLAIIFVLTKYKKWKWLWDEWLTTVDHKKIGAM CCCEEEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIISAVIMLFRGGMDGLMIRAQLTFPETTYLNAEHYNGIFTTHGTVMILFMAMPFVMGLM HHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCHHCCCEEECCHHHHHHHHHHHHHHHHH NLVVPLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHC GVGNNYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAF CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH PVLTVALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIIS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCCEEEEEEECHHHHHHHHHH TFSRKRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEECCCCHHH FNWLFTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYV HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEHHHHHHH LIAGTVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCHHHHH YTYSESLGWGWLNQIASVGAVMMGIGFLLLCYNVIWSARHGERDTTGDPWDGRTLEWATQ HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCC SPVQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASGFFGLAG CCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHCCCEEECCCCCCCCEEECHHHHHHH FALVFSWFWLAAIGGIGILACLIYRSFDYDEGYYISVDEIKKSEHVA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ferrocytochrome c; O2
Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7575098 [H]