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The map label for this gene is cyoA [H]

Identifier: 118476381

GI number: 118476381

Start: 742678

End: 743691

Strand: Reverse

Name: cyoA [H]

Synonym: BALH_0639

Alternate gene names: 118476381

Gene position: 743691-742678 (Counterclockwise)

Preceding gene: 118476388

Following gene: 118476380

Centisome position: 14.15

GC content: 36.09

Gene sequence:

>1014_bases
ATGATATTCACCTTAAAAAGTGTGCATTTGTGTCTATTTTTTAACAATATCTCAAAAACTATTGCCTTCTATAAATTAAT
AGGTTTATATTGTTTTATTGGCATAGTTTCAATCCAAGGAGAAAGGAGATTTTCAATCGTGCAACTAAAGAAAGCGTTTT
GGAAGTTGGCTTCGCTTCTTCCGTTATCATTACTTCTGTTCCTCGGTGGCTGTGATAAAAAACTCGCAGTATTAAATCCG
CAAGGACCTGTTGCAAAAGCACAGTATGATTTAATTGTTTGGTCATTCTTGCTTATGTCATTAATTATCGCAATTGTATT
CATCTTGTTTACAGTCATCTTGATTCGTTATCGTGAAAAACCAGAGAATATGGACTATGAGCCACCTGAACAACACGGTA
ACACATTATTAGAAATCATTTGGACGCTTGTTCCTGTTATTATCGTTATCGCATTATCGATTCCAACAGTAAAAGCAACT
TATGCTTCGGAAGAGGTTCCGAAAGAGTCCAAACATATTAAACCAGTGGAGATTTATGTTACATCTGCAAACTGGAAATG
GTTATTCAGTTACCCAGAGGAAAAAATTGAAACCGTTAACTATTTAAACATCCCAGCTGGTGTACCAATTCAATTCAAAC
TGACTTCTGTCGGCCCAATGAATGCTTTCTGGGTACCAGAACTTGGTGGTATGAAGTACACAATGGATGGCATGATTATG
GACCTTTATTTACAAGCTGACAAGCCAGGTTCTTACCTAGGTCGTAGCGCGAACTTCTCTGGTGAAGGATTTACTCACAT
GGAGTTCGAAGTTGAAGCAAAAACTAAAGAGAAATATGACAAGTGGGTTAAAGAAGTACAACAAACTGCTCCTAAACTAA
CAGAAGATAAGTACAACGAAATTGTTAAACCTGGTGTAGTTGGTCGTATGACATTCTCTAGCCATCACTTAAGTTATGTA
GATCCAAAATCACTTGAATATTGTGATTACAACTACTACAAAAACAAAAAATAA

Upstream 100 bases:

>100_bases
TTTCTATTTCTTGGGTATCCTGGTATAACTTTATTTATCTTAAAATTTTCACAATCGCATTTTTCTCTGGAAAATAGTTT
ACAATGTAATCAAGTTACAA

Downstream 100 bases:

>100_bases
TAGCTATAATTCCAACAGATTGGAGTGAACACAGTGAAGCTTGATGAATTCTTTGTCACAGGTGACCCGATTATTTACGG
TGCAGACGCTTCTATCGTTC

Product: quinol oxidase, subunit 2 (cytochrome c oxidase, subunit II)

Products: ferricytochrome c; H2O

Alternate protein names: Cytochrome aa(3) subunit 2; Quinol oxidase polypeptide II [H]

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MIFTLKSVHLCLFFNNISKTIAFYKLIGLYCFIGIVSIQGERRFSIVQLKKAFWKLASLLPLSLLLFLGGCDKKLAVLNP
QGPVAKAQYDLIVWSFLLMSLIIAIVFILFTVILIRYREKPENMDYEPPEQHGNTLLEIIWTLVPVIIVIALSIPTVKAT
YASEEVPKESKHIKPVEIYVTSANWKWLFSYPEEKIETVNYLNIPAGVPIQFKLTSVGPMNAFWVPELGGMKYTMDGMIM
DLYLQADKPGSYLGRSANFSGEGFTHMEFEVEAKTKEKYDKWVKEVQQTAPKLTEDKYNEIVKPGVVGRMTFSSHHLSYV
DPKSLEYCDYNYYKNKK

Sequences:

>Translated_337_residues
MIFTLKSVHLCLFFNNISKTIAFYKLIGLYCFIGIVSIQGERRFSIVQLKKAFWKLASLLPLSLLLFLGGCDKKLAVLNP
QGPVAKAQYDLIVWSFLLMSLIIAIVFILFTVILIRYREKPENMDYEPPEQHGNTLLEIIWTLVPVIIVIALSIPTVKAT
YASEEVPKESKHIKPVEIYVTSANWKWLFSYPEEKIETVNYLNIPAGVPIQFKLTSVGPMNAFWVPELGGMKYTMDGMIM
DLYLQADKPGSYLGRSANFSGEGFTHMEFEVEAKTKEKYDKWVKEVQQTAPKLTEDKYNEIVKPGVVGRMTFSSHHLSYV
DPKSLEYCDYNYYKNKK
>Mature_337_residues
MIFTLKSVHLCLFFNNISKTIAFYKLIGLYCFIGIVSIQGERRFSIVQLKKAFWKLASLLPLSLLLFLGGCDKKLAVLNP
QGPVAKAQYDLIVWSFLLMSLIIAIVFILFTVILIRYREKPENMDYEPPEQHGNTLLEIIWTLVPVIIVIALSIPTVKAT
YASEEVPKESKHIKPVEIYVTSANWKWLFSYPEEKIETVNYLNIPAGVPIQFKLTSVGPMNAFWVPELGGMKYTMDGMIM
DLYLQADKPGSYLGRSANFSGEGFTHMEFEVEAKTKEKYDKWVKEVQQTAPKLTEDKYNEIVKPGVVGRMTFSSHHLSYV
DPKSLEYCDYNYYKNKK

Specific function: Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=251, Percent_Identity=37.0517928286853, Blast_Score=162, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR008972
- InterPro:   IPR006332
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF02790 COX2_TM [H]

EC number: 1.9.3.1

Molecular weight: Translated: 38633; Mature: 38633

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFTLKSVHLCLFFNNISKTIAFYKLIGLYCFIGIVSIQGERRFSIVQLKKAFWKLASLL
CEEEEEHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
PLSLLLFLGGCDKKLAVLNPQGPVAKAQYDLIVWSFLLMSLIIAIVFILFTVILIRYREK
HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PENMDYEPPEQHGNTLLEIIWTLVPVIIVIALSIPTVKATYASEEVPKESKHIKPVEIYV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHCCCHHCCCCEEEEEE
TSANWKWLFSYPEEKIETVNYLNIPAGVPIQFKLTSVGPMNAFWVPELGGMKYTMDGMIM
ECCCCEEEECCCHHHHCEEEEEECCCCCCEEEEEECCCCCCEEECCCCCCCEEECCCEEE
DLYLQADKPGSYLGRSANFSGEGFTHMEFEVEAKTKEKYDKWVKEVQQTAPKLTEDKYNE
EEEEECCCCHHHCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHH
IVKPGVVGRMTFSSHHLSYVDPKSLEYCDYNYYKNKK
HCCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MIFTLKSVHLCLFFNNISKTIAFYKLIGLYCFIGIVSIQGERRFSIVQLKKAFWKLASLL
CEEEEEHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
PLSLLLFLGGCDKKLAVLNPQGPVAKAQYDLIVWSFLLMSLIIAIVFILFTVILIRYREK
HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PENMDYEPPEQHGNTLLEIIWTLVPVIIVIALSIPTVKATYASEEVPKESKHIKPVEIYV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHCCCHHCCCCEEEEEE
TSANWKWLFSYPEEKIETVNYLNIPAGVPIQFKLTSVGPMNAFWVPELGGMKYTMDGMIM
ECCCCEEEECCCHHHHCEEEEEECCCCCCEEEEEECCCCCCEEECCCCCCCEEECCCEEE
DLYLQADKPGSYLGRSANFSGEGFTHMEFEVEAKTKEKYDKWVKEVQQTAPKLTEDKYNE
EEEEECCCCHHHCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHH
IVKPGVVGRMTFSSHHLSYVDPKSLEYCDYNYYKNKK
HCCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]