Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is ywjB [H]
Identifier: 118476335
GI number: 118476335
Start: 686564
End: 687103
Strand: Direct
Name: ywjB [H]
Synonym: BALH_0591
Alternate gene names: 118476335
Gene position: 686564-687103 (Clockwise)
Preceding gene: 118476333
Following gene: 118476338
Centisome position: 13.06
GC content: 34.26
Gene sequence:
>540_bases ATGCAAGGAGGAAAAGAGATGTCACGTGAAATCGTTTTATTTATTGCAGCGAGCTTGGATGGATATATCGCGAAAGAAGA TGATGATTTACAGTGGTTAATGGAAACGGAAGGAGAGGGAGATAACGGTTATACAGAAATGTATGAAACGATTGATACAA TAATTATGGGAAAAAGAACGTACGATTATGTAGTAGAGCATATGGACACATTCCCGTATGTAGATAAAAAATGTTATGTT TTCTCTAACTCAGAAAAAGGTTCAAACGAACACGCGGAGTTTGTAAATGAAGATGTAGTGGAGTTTATAAAAAGGTTAAA AGCACAAGAAGGATCTAAAATATGGATGGTCGGTGGAGGAAGTCTGCTAAGAGAATTCTTTAAGAATAATTTAATTGATG AATATGTTGTTACGATTACACCACATATATTAGGTTCTGGAGTGCCGTTATTTCAAGACAAGAACCCAGAAATCCATTTA ACTTTAACGGATACGAAACGTTTTGGGCAATTTGTAAACTTATATTATAAAGTAAAATGA
Upstream 100 bases:
>100_bases AGCTTTTGACAAATGTATCACCTTTTTTCTTTTTAACATGACATAAATTGTCGTGTTTTATTGTTAGTATATTGTTTACA TCATATGTTATCAAGATGAG
Downstream 100 bases:
>100_bases TAAAGAAACACGACTACTGATGGTAGTCGTGTTTCTTTATAGATGGCAATGAAATTGTAAAACAAGACCCGTGATCAACT TCGCTCGTTACAGTAATAGT
Product: dihydrofolate reductase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MQGGKEMSREIVLFIAASLDGYIAKEDDDLQWLMETEGEGDNGYTEMYETIDTIIMGKRTYDYVVEHMDTFPYVDKKCYV FSNSEKGSNEHAEFVNEDVVEFIKRLKAQEGSKIWMVGGGSLLREFFKNNLIDEYVVTITPHILGSGVPLFQDKNPEIHL TLTDTKRFGQFVNLYYKVK
Sequences:
>Translated_179_residues MQGGKEMSREIVLFIAASLDGYIAKEDDDLQWLMETEGEGDNGYTEMYETIDTIIMGKRTYDYVVEHMDTFPYVDKKCYV FSNSEKGSNEHAEFVNEDVVEFIKRLKAQEGSKIWMVGGGSLLREFFKNNLIDEYVVTITPHILGSGVPLFQDKNPEIHL TLTDTKRFGQFVNLYYKVK >Mature_179_residues MQGGKEMSREIVLFIAASLDGYIAKEDDDLQWLMETEGEGDNGYTEMYETIDTIIMGKRTYDYVVEHMDTFPYVDKKCYV FSNSEKGSNEHAEFVNEDVVEFIKRLKAQEGSKIWMVGGGSLLREFFKNNLIDEYVVTITPHILGSGVPLFQDKNPEIHL TLTDTKRFGQFVNLYYKVK
Specific function: Unknown
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yyaP [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002734 [H]
Pfam domain/function: PF01872 RibD_C [H]
EC number: NA
Molecular weight: Translated: 20639; Mature: 20639
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGGKEMSREIVLFIAASLDGYIAKEDDDLQWLMETEGEGDNGYTEMYETIDTIIMGKRT CCCCHHHHHHEEEEEEECCCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCH YDYVVEHMDTFPYVDKKCYVFSNSEKGSNEHAEFVNEDVVEFIKRLKAQEGSKIWMVGGG HHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECH SLLREFFKNNLIDEYVVTITPHILGSGVPLFQDKNPEIHLTLTDTKRFGQFVNLYYKVK HHHHHHHHCCCHHHHHEEECHHHHCCCCCCEECCCCEEEEEEECCHHHHHHHHEEEEEC >Mature Secondary Structure MQGGKEMSREIVLFIAASLDGYIAKEDDDLQWLMETEGEGDNGYTEMYETIDTIIMGKRT CCCCHHHHHHEEEEEEECCCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCH YDYVVEHMDTFPYVDKKCYVFSNSEKGSNEHAEFVNEDVVEFIKRLKAQEGSKIWMVGGG HHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECH SLLREFFKNNLIDEYVVTITPHILGSGVPLFQDKNPEIHLTLTDTKRFGQFVNLYYKVK HHHHHHHHCCCHHHHHEEECHHHHCCCCCCEECCCCEEEEEEECCHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]