Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
---|---|
Accession | NC_008600 |
Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is 118476333
Identifier: 118476333
GI number: 118476333
Start: 684056
End: 685489
Strand: Direct
Name: 118476333
Synonym: BALH_0589
Alternate gene names: NA
Gene position: 684056-685489 (Clockwise)
Preceding gene: 118476332
Following gene: 118476335
Centisome position: 13.01
GC content: 33.33
Gene sequence:
>1434_bases ATGACGAATTCAAAGAACTCCAAAGAAATATATGAATTTGCTGAAAAAATCGCTTTAGATGATTTTGATAAAATCGAAGA AAAACATGAATTTTCAAATACATATACACGTAAAAAGAAATTGTTTATGGAGGAAATGAAGCTGAAAAATAGACAACCAC AGAAAAAGCGTAAAAGACATCGTATGTTAATCGCTGCTGCTTGCTTATTGATTGGTATGCCGACAACCGTTTTTGGGGCA GTAAAAGTCTACAATATGATTGTTCAAAAACAAAATTACGAAGTAAATGTGTCAGTAAAAAATAAGGACTCAAAAAAGAG TGATAAGTGGTATAAGTTGAAAATCGATAAATTGCCAGAAAATATGGAAGCAATTGATGATAGTGCTATGAAATATTCAT TTAAAGATAACTACGCAATGGGGGGATTTTCATTCGCTCTTTGGAGAGTAGGGGGGGATTCAGATTTTTCAACTCTGTAC TCGAAAAGTTATGAAGAAAAAGAGATAAATGGTAAGAAGGCAGTAATTGTCCATAAAGACAATGGAAATAAAGATTTAAT GTTTGATAGAGTGATTTTTCTCTATTTTGAGGAAGAGGGAATTATGTTACAAAGTTATATTGGAAACGATATAAACGAAG AACAAATGATGGATGTGTTAGGGAATGTTTCACTTGAGCCTACGTCAAAAGAAAAGGCATCATATATAACGGATTATGAT AAAAAGTATTTTAGTGAAGCAGAGGAACCTAAAGAAACTAAAGTGATTCCTTTGAAAAAAGATAGTAAACGTCTATTTCA TATAGGGCAAAAGGTTCCAGTAACGATAACGATGGATGACAGCCAAGTTGAATATGTGATAGAAAAAGTTGAAGTCTTTG ACTCAATTAAAGATTTTAAAAGAGATAACTTTAATGAACTTGGCTTAGGGATATTAAGCGAGAATCAGGCTTTGGATCAA GCTGGACAATTGTTACCATATAGACGGGATGAATATAAACTTGGAAATGGTAAAGATTCTATTGATAAATTAGTAGATTC GAAATTAGTTCACCCTAAATTTGTCTACCTAACAACAACAGTGAAAAATATTGGGAAAAAGTCGACAGAAGAAATCTATA TGACTCCATCCATACAAGTGCTTAAAAGTAAGGGGAATGTATGGAACTACGCTGAAAAAGATGGAATTGCCGAGAAAAAT ATTATGACGGGTGAAGTGGATTATTTAGAACCGCATGGAGACGGAAAGAGCTTTTATAATATTGGTAGTATCCGACCAGG AGAAACGGTAAATGTTAAATTAGGCTATTTTGTAGATGAGGATAAACTAGATTCAATCTTCCTGGATGCTTTCCGTTACA GTGGGTCTAGTGGCACTGAGAATATGAATGAGAAAAATCGTTGGTGGTTCGATATTCGTCAACAGTCAAAATAA
Upstream 100 bases:
>100_bases CAAGAAATTTCAAGTGTCATGGGGATAACGGAGGCTAATGTTCGCAAGCAGTTTGAACGCGCTCGAAAACGAGTCCAAAA TATGATAGGAGGTATACAAC
Downstream 100 bases:
>100_bases TAGAAACAAATCGACGAAAAAAGCTGCTTATATTTAGCAGCTTTTTAGTCTTCATACATATGTAAAATTTCTTTCGCACG TATACGTAAACCATCTATCA
Product: hypothetical protein
Products: NA
Alternate protein names: ECF-Type Sigma Factor Negative Effector
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MTNSKNSKEIYEFAEKIALDDFDKIEEKHEFSNTYTRKKKLFMEEMKLKNRQPQKKRKRHRMLIAAACLLIGMPTTVFGA VKVYNMIVQKQNYEVNVSVKNKDSKKSDKWYKLKIDKLPENMEAIDDSAMKYSFKDNYAMGGFSFALWRVGGDSDFSTLY SKSYEEKEINGKKAVIVHKDNGNKDLMFDRVIFLYFEEEGIMLQSYIGNDINEEQMMDVLGNVSLEPTSKEKASYITDYD KKYFSEAEEPKETKVIPLKKDSKRLFHIGQKVPVTITMDDSQVEYVIEKVEVFDSIKDFKRDNFNELGLGILSENQALDQ AGQLLPYRRDEYKLGNGKDSIDKLVDSKLVHPKFVYLTTTVKNIGKKSTEEIYMTPSIQVLKSKGNVWNYAEKDGIAEKN IMTGEVDYLEPHGDGKSFYNIGSIRPGETVNVKLGYFVDEDKLDSIFLDAFRYSGSSGTENMNEKNRWWFDIRQQSK
Sequences:
>Translated_477_residues MTNSKNSKEIYEFAEKIALDDFDKIEEKHEFSNTYTRKKKLFMEEMKLKNRQPQKKRKRHRMLIAAACLLIGMPTTVFGA VKVYNMIVQKQNYEVNVSVKNKDSKKSDKWYKLKIDKLPENMEAIDDSAMKYSFKDNYAMGGFSFALWRVGGDSDFSTLY SKSYEEKEINGKKAVIVHKDNGNKDLMFDRVIFLYFEEEGIMLQSYIGNDINEEQMMDVLGNVSLEPTSKEKASYITDYD KKYFSEAEEPKETKVIPLKKDSKRLFHIGQKVPVTITMDDSQVEYVIEKVEVFDSIKDFKRDNFNELGLGILSENQALDQ AGQLLPYRRDEYKLGNGKDSIDKLVDSKLVHPKFVYLTTTVKNIGKKSTEEIYMTPSIQVLKSKGNVWNYAEKDGIAEKN IMTGEVDYLEPHGDGKSFYNIGSIRPGETVNVKLGYFVDEDKLDSIFLDAFRYSGSSGTENMNEKNRWWFDIRQQSK >Mature_476_residues TNSKNSKEIYEFAEKIALDDFDKIEEKHEFSNTYTRKKKLFMEEMKLKNRQPQKKRKRHRMLIAAACLLIGMPTTVFGAV KVYNMIVQKQNYEVNVSVKNKDSKKSDKWYKLKIDKLPENMEAIDDSAMKYSFKDNYAMGGFSFALWRVGGDSDFSTLYS KSYEEKEINGKKAVIVHKDNGNKDLMFDRVIFLYFEEEGIMLQSYIGNDINEEQMMDVLGNVSLEPTSKEKASYITDYDK KYFSEAEEPKETKVIPLKKDSKRLFHIGQKVPVTITMDDSQVEYVIEKVEVFDSIKDFKRDNFNELGLGILSENQALDQA GQLLPYRRDEYKLGNGKDSIDKLVDSKLVHPKFVYLTTTVKNIGKKSTEEIYMTPSIQVLKSKGNVWNYAEKDGIAEKNI MTGEVDYLEPHGDGKSFYNIGSIRPGETVNVKLGYFVDEDKLDSIFLDAFRYSGSSGTENMNEKNRWWFDIRQQSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55250; Mature: 55119
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSKNSKEIYEFAEKIALDDFDKIEEKHEFSNTYTRKKKLFMEEMKLKNRQPQKKRKRH CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RMLIAAACLLIGMPTTVFGAVKVYNMIVQKQNYEVNVSVKNKDSKKSDKWYKLKIDKLPE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEECCCCC NMEAIDDSAMKYSFKDNYAMGGFSFALWRVGGDSDFSTLYSKSYEEKEINGKKAVIVHKD HHHHHCCHHEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCHHHCCCCEEEEEECC NGNKDLMFDRVIFLYFEEEGIMLQSYIGNDINEEQMMDVLGNVSLEPTSKEKASYITDYD CCCCCEEEEEEEEEEECCCCEEEEHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH KKYFSEAEEPKETKVIPLKKDSKRLFHIGQKVPVTITMDDSQVEYVIEKVEVFDSIKDFK HHHHHCCCCCCCCEEEECCCCCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH RDNFNELGLGILSENQALDQAGQLLPYRRDEYKLGNGKDSIDKLVDSKLVHPKFVYLTTT CCCCCHHCCEEECCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEE VKNIGKKSTEEIYMTPSIQVLKSKGNVWNYAEKDGIAEKNIMTGEVDYLEPHGDGKSFYN HHHCCCCCCCEEEECCCCEEEECCCCCCCCHHHCCCCCCCEEECCCEEECCCCCCCCEEE IGSIRPGETVNVKLGYFVDEDKLDSIFLDAFRYSGSSGTENMNEKNRWWFDIRQQSK CCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure TNSKNSKEIYEFAEKIALDDFDKIEEKHEFSNTYTRKKKLFMEEMKLKNRQPQKKRKRH CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RMLIAAACLLIGMPTTVFGAVKVYNMIVQKQNYEVNVSVKNKDSKKSDKWYKLKIDKLPE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEECCCCC NMEAIDDSAMKYSFKDNYAMGGFSFALWRVGGDSDFSTLYSKSYEEKEINGKKAVIVHKD HHHHHCCHHEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCHHHCCCCEEEEEECC NGNKDLMFDRVIFLYFEEEGIMLQSYIGNDINEEQMMDVLGNVSLEPTSKEKASYITDYD CCCCCEEEEEEEEEEECCCCEEEEHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH KKYFSEAEEPKETKVIPLKKDSKRLFHIGQKVPVTITMDDSQVEYVIEKVEVFDSIKDFK HHHHHCCCCCCCCEEEECCCCCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH RDNFNELGLGILSENQALDQAGQLLPYRRDEYKLGNGKDSIDKLVDSKLVHPKFVYLTTT CCCCCHHCCEEECCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEE VKNIGKKSTEEIYMTPSIQVLKSKGNVWNYAEKDGIAEKNIMTGEVDYLEPHGDGKSFYN HHHCCCCCCCEEEECCCCEEEECCCCCCCCHHHCCCCCCCEEECCCEEECCCCCCCCEEE IGSIRPGETVNVKLGYFVDEDKLDSIFLDAFRYSGSSGTENMNEKNRWWFDIRQQSK CCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA