Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is yvbV [H]
Identifier: 118476164
GI number: 118476164
Start: 470123
End: 471073
Strand: Direct
Name: yvbV [H]
Synonym: BALH_0411
Alternate gene names: 118476164
Gene position: 470123-471073 (Clockwise)
Preceding gene: 118476162
Following gene: 118476165
Centisome position: 8.94
GC content: 35.02
Gene sequence:
>951_bases GTGAAGACAGAGAAATTTTTTACCCATCCGATTGGCGTGTTTACTGCTGCAATAGTAGCGACTTTTTTATGGGGGAGCGC ATTCCCTTTTATTAAATTAAGTTATGCTGAACTTGGAATTCAGCCACAAGAAGTTGGGGAGCAAATATTATTTGCTGGTT ATCGTTTCTTCTTATCTGGAGTCATGCTCTTATTCTTCTTTAAATTATTAGGAAAAGACATGAACTTCAAAAAAGGAACG GGGAAGCAGTTAGTACAAATTGGTTTATTTCAAACATTTCTTCAATATATATGTTTTTATATTGGAATGAGTTATAGCTC TGGTATTGAAGGAGCTATCATTTCAGGAACATCATCATTCTTTCAAATTATACTTGCACACTTTTTATATAAAGATGATG CTCTCAATATGAGAAAAATAATTGGAGTTTCTATCGGCTTTTGTGGTGTCGTTTTAGTAAATGTACCGAGTGATGGTAGT TTGTCATTTCATTTCGGAATCGGTAGCTTATTACTTCTTAGTGCAGCAATGCTATATTCATATGGGAACATATTGGCGAA AGAAGGTAGTAAAACGTTAGATGTCGGCTATATGACAGCATACCAAATGATTTTTGGTTCTATCGGACTATTATGTATAG GTGCTTTGCAAGTTGGAATTATGCCATTTACATTTAGTGTACATGCAATACTTATGCTGATCTACTTATCTTTCTTATCT GCAGCAGGATTTTGCATTTGGAATACAATTATGAAGTATAACAAGGTTGGAAAAGTATCCATGTACATGTTCTTTATACC TGTATTTGGTGTGTTATTATCGAGCATGATTTTAGGCGAAGCAATTCATTCATTTGTACTATTCGGTTTAGCATGTGTAG CCGCGGGAATTATCGTCGTGAATCGGACGCCAGCTAAGCAAAAAATAGAGCAAGAAAAACAAGTAGCATAG
Upstream 100 bases:
>100_bases ATATGTTTTTGTTTGTGTATAAACTGAAAACTTGTGTTTTCTCAATTCCTTTGGTATATATGAATACTGTTCATAAAAAG ATCGGAAAGGAAGACAAGAA
Downstream 100 bases:
>100_bases AAAGAGAAGACGATTACAAAAGAAGAACAGTACAGTTCTTCTTTTTTTACATAGAAAAAGGATAATAGACTAGGTGTAAC GAAAAAGGATACAAAAAGCA
Product: DMT family permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MKTEKFFTHPIGVFTAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLFFFKLLGKDMNFKKGT GKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQIILAHFLYKDDALNMRKIIGVSIGFCGVVLVNVPSDGS LSFHFGIGSLLLLSAAMLYSYGNILAKEGSKTLDVGYMTAYQMIFGSIGLLCIGALQVGIMPFTFSVHAILMLIYLSFLS AAGFCIWNTIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQKIEQEKQVA
Sequences:
>Translated_316_residues MKTEKFFTHPIGVFTAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLFFFKLLGKDMNFKKGT GKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQIILAHFLYKDDALNMRKIIGVSIGFCGVVLVNVPSDGS LSFHFGIGSLLLLSAAMLYSYGNILAKEGSKTLDVGYMTAYQMIFGSIGLLCIGALQVGIMPFTFSVHAILMLIYLSFLS AAGFCIWNTIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQKIEQEKQVA >Mature_316_residues MKTEKFFTHPIGVFTAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLFFFKLLGKDMNFKKGT GKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQIILAHFLYKDDALNMRKIIGVSIGFCGVVLVNVPSDGS LSFHFGIGSLLLLSAAMLYSYGNILAKEGSKTLDVGYMTAYQMIFGSIGLLCIGALQVGIMPFTFSVHAILMLIYLSFLS AAGFCIWNTIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQKIEQEKQVA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 34701; Mature: 34701
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTEKFFTHPIGVFTAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSG CCCCHHHHCHHHHHHHHHHHHHHHCCCCCHHEEHHHHHCCCHHHHHHHHHHHHHHHHHHH VMLLFFFKLLGKDMNFKKGTGKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSF HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHH FQIILAHFLYKDDALNMRKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAMLYS HHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHH YGNILAKEGSKTLDVGYMTAYQMIFGSIGLLCIGALQVGIMPFTFSVHAILMLIYLSFLS HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGFCIWNTIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE NRTPAKQKIEQEKQVA CCCCHHHHHHHHHCCC >Mature Secondary Structure MKTEKFFTHPIGVFTAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSG CCCCHHHHCHHHHHHHHHHHHHHHCCCCCHHEEHHHHHCCCHHHHHHHHHHHHHHHHHHH VMLLFFFKLLGKDMNFKKGTGKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSF HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHH FQIILAHFLYKDDALNMRKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAMLYS HHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHH YGNILAKEGSKTLDVGYMTAYQMIFGSIGLLCIGALQVGIMPFTFSVHAILMLIYLSFLS HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGFCIWNTIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE NRTPAKQKIEQEKQVA CCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]