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The map label for this gene is rbn [H]

Identifier: 118476162

GI number: 118476162

Start: 466872

End: 467741

Strand: Direct

Name: rbn [H]

Synonym: BALH_0409

Alternate gene names: 118476162

Gene position: 466872-467741 (Clockwise)

Preceding gene: 118476161

Following gene: 118476164

Centisome position: 8.88

GC content: 36.55

Gene sequence:

>870_bases
ATGAGAAAAATTTTAGAAAAGGTAAGAAGAAATCGTACTTATTCGTTTGGTAAAGATTTGTATGACCGGACGATGCGCGA
TGATGTAGCGGGCTTGGCAGCACAGCTCGCTTATTTCTTCTTGCTTGCGATTTTTCCTGGGCTTGTTTTCTTAATTACGC
TTCTTGGATTCATTGACCTTCAAACAGAAAGTGTGCTCAACTTATTAGAACCGTACGTACCCGAAGATGCAATGTCTTTA
ATTGAAGTAAACGTTGATAAAGTTGTAAATGAGCAAAATGGTGGTTTATTATCATTTGGTTTATTATCAATGCTATGGTT
TGCTTCAAACGGGGTGAATGCGGTTATGAATGCTTTTAATCGTGCGTATGATGTAACAGAAACACGTTCCTTTATTAAAA
CGAGAGCTTTATCAATTGTGTTTACATTAGCGATTATCTTTATGATTGTGTTTGCGCTAATTGTTCCGGTGTTTGGACAA
GTCATTGGAGCAGCGGTATTTAAAGCAATTGGGTTATCGGATAGTTTTTCTTACGTGTGGAGTATTACGCGGTTAGTAGC
GAGTTTCTTCGTGCTATTTGCATTGTTTAGTTTTATATATACATTTGCACCAGATCGAAAGCTAAAAAGAAGAGAAGTTA
TTTCAGGAGCAACATTTGCTACTGTAGGATGGATTGTGGTATCGTACTCATTTGCTTATTATGTAGATAAGTTTGCGAAT
TACGCCAATACATATGGTGGTCTCGGTGGTATTATTATTTTAATGTTATGGTTTTACTTGACTGGATGGGTAATTTTACT
TGGCGGTGAAATTAATGGTTTACTCCATCATTATAGGACGAGTGACAATAATTCCCGTAATGAAAAGTGA

Upstream 100 bases:

>100_bases
TGAACTATTTATGAAAGACTCTAATGTAGAGGAAAAAAAAACTGAAGCGTACATTGAGTTGAAGCAAGATAAAGAAGAGA
AGAAAAGCGTTTAAACATAT

Downstream 100 bases:

>100_bases
GCTCTTGTTCCATAATAATAGGGAACAGGGGGGATATGTCATGAGTAATAATAAAAAGAATCACAATAACAAAAATAACA
ATAAACAAAAGAGCAGTTCG

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MRKILEKVRRNRTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQTESVLNLLEPYVPEDAMSL
IEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRALSIVFTLAIIFMIVFALIVPVFGQ
VIGAAVFKAIGLSDSFSYVWSITRLVASFFVLFALFSFIYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFAN
YANTYGGLGGIIILMLWFYLTGWVILLGGEINGLLHHYRTSDNNSRNEK

Sequences:

>Translated_289_residues
MRKILEKVRRNRTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQTESVLNLLEPYVPEDAMSL
IEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRALSIVFTLAIIFMIVFALIVPVFGQ
VIGAAVFKAIGLSDSFSYVWSITRLVASFFVLFALFSFIYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFAN
YANTYGGLGGIIILMLWFYLTGWVILLGGEINGLLHHYRTSDNNSRNEK
>Mature_289_residues
MRKILEKVRRNRTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQTESVLNLLEPYVPEDAMSL
IEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRALSIVFTLAIIFMIVFALIVPVFGQ
VIGAAVFKAIGLSDSFSYVWSITRLVASFFVLFALFSFIYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFAN
YANTYGGLGGIIILMLWFYLTGWVILLGGEINGLLHHYRTSDNNSRNEK

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790319, Length=309, Percent_Identity=23.3009708737864, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 32574; Mature: 32574

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure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HHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]