BacMap

Definition	Bacillus thuringiensis str. Al Hakam chromosome, complete genome.
Accession	NC_008600
Length	5,257,091

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The map label for this gene is yfnA [H]

Identifier: 118475991

GI number: 118475991

Start: 240798

End: 242228

Strand: Direct

Name: yfnA [H]

Synonym: BALH_0228

Alternate gene names: 118475991

Gene position: 240798-242228 (Clockwise)

Preceding gene: 118475990

Following gene: 118475992

Centisome position: 4.58

GC content: 38.16

Gene sequence:

>1431_bases
TTGGAGGAGCAAGCTATGAAGCAAATTTTTCAAAAGAAGCCTATTGCAAAGTTAATGCAAGAGAGTAAACAAAAGACATT
AGCAAGAACATTGGGCGCGTTGGATTTAACGATGCTTGGAATCGGGGCAATTGTTGGAACCGGTATTTTTGTTTTAACGG
GCGTGGTAGCAGCAAAACATTCTGGACCAGCTATTATATTATCATTTGCGATAGCCGCGTTAGCCTGTGCTTTTGCTGCA
TTTTGTTATGCTGAATTCGCTTCTTCAGTTCCTGTCTCAGGCAGTGTGTATACGTACACATATGCGACGATGGGAGAGGT
ATTCGCATTTTTAATTGGATGGGACTTAATGCTGGAGTATTTACTCGCTACATCTGCTGTGGCAAACGGTTGGTCGGCTT
ATTTCCAATCTTTATTAAAGGGGTTTGGAATCCATATTCCTACCATTCTCTCCTCAGCCCCAGGAACCGGAAAGGGTGGA
ATCATTGATTTACCTGCAGTTCTCATTATTTTAGTGATGACAGTTCTTTTATCTAGAGGTGTTCGTGAAAGTGCACGTGT
AAATAATATTATGGTATTTATTAAAATAGCAGTCGTTCTTATTTTTATCTTTGCTGGTTTTAATTATGTGAAACCTGAAA
ACTGGACACCTTTTATGCCGTTTGGTTTAGATGGTGTAATGGCTGGAGCTGCTACAGTGTTCTTTGCATTCATAGGGTTT
GATGCAGTTTCAACAGCAGCAGAAGAAGTGAAACGTCCGCAACGTGATTTACCAATTGGCATTATTGCATCTTTATTAAT
TTGTACGGTTCTTTATATTGTTGTTTCACTTATTTTGACAGGAATTGTTCCATACGGACAGCTAAATATATCAGATCCAG
TTGCTTTTGCACTTCAATTTATTGGACAAGATAGTTTAGCAGGAGTAATTTCGGTAGGAGCAATTACAGGGATTACGACA
GTAATGTTAGTTATGATGTATGGGCAAGTACGTGTTTCGTATGCAATGAGTAGAGATGGATTATTGCCGAAGCGCCTTGC
TAAAGTTCATCCAAAATTTAAAACACCGTTTTTAAATACGTGGACAACGGGAATTATTGCAGCACTTATTTCAGGATTAA
TAGATTTAAATGTGTTAGCGCATCTTGTAAATATGGGGACTTTATCAGCCTTTGCACTTGTAGCTGTAGCTGTTATTGTA
ATGAGAAGAACTCATCCTGATTTACCAAGAGCGTTTAAGGCACCGCTTGTACCAATTTTACCAGCGTTAACGGTAATTTT
TTGTTTATACTTAATGCTTCAATTATCCGGAACGGCTTGGATTAGTTTTAGTATATGGATGGTTATCGGTATTGCGGTTT
ACTTCTTATATAGCCGAAAACATAGCGCTTTAAATAATAGTAAAGACGAAGAAGATGCAGCAAATTTATAA

Upstream 100 bases:

>100_bases
TTCATAAGAATTTCTACTTATTTCGACAAAAGTATTGACTAGGAAAAGTGCTATGAGTAAAATGAAAAAGCGAATTAAAA
ATTTTCAGAAAATTTAAAAC

Downstream 100 bases:

>100_bases
GTAGAAAAATCCATCCTAATTCTGTTAGGGTGGATTTTTATTTTTGAAAATTTACATTTTTCTGAATGTATTATAAGATA
ATGGTTGGCGAACAAAAGGG

Product: amino acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MEEQAMKQIFQKKPIAKLMQESKQKTLARTLGALDLTMLGIGAIVGTGIFVLTGVVAAKHSGPAIILSFAIAALACAFAA
FCYAEFASSVPVSGSVYTYTYATMGEVFAFLIGWDLMLEYLLATSAVANGWSAYFQSLLKGFGIHIPTILSSAPGTGKGG
IIDLPAVLIILVMTVLLSRGVRESARVNNIMVFIKIAVVLIFIFAGFNYVKPENWTPFMPFGLDGVMAGAATVFFAFIGF
DAVSTAAEEVKRPQRDLPIGIIASLLICTVLYIVVSLILTGIVPYGQLNISDPVAFALQFIGQDSLAGVISVGAITGITT
VMLVMMYGQVRVSYAMSRDGLLPKRLAKVHPKFKTPFLNTWTTGIIAALISGLIDLNVLAHLVNMGTLSAFALVAVAVIV
MRRTHPDLPRAFKAPLVPILPALTVIFCLYLMLQLSGTAWISFSIWMVIGIAVYFLYSRKHSALNNSKDEEDAANL

Sequences:

>Translated_476_residues
MEEQAMKQIFQKKPIAKLMQESKQKTLARTLGALDLTMLGIGAIVGTGIFVLTGVVAAKHSGPAIILSFAIAALACAFAA
FCYAEFASSVPVSGSVYTYTYATMGEVFAFLIGWDLMLEYLLATSAVANGWSAYFQSLLKGFGIHIPTILSSAPGTGKGG
IIDLPAVLIILVMTVLLSRGVRESARVNNIMVFIKIAVVLIFIFAGFNYVKPENWTPFMPFGLDGVMAGAATVFFAFIGF
DAVSTAAEEVKRPQRDLPIGIIASLLICTVLYIVVSLILTGIVPYGQLNISDPVAFALQFIGQDSLAGVISVGAITGITT
VMLVMMYGQVRVSYAMSRDGLLPKRLAKVHPKFKTPFLNTWTTGIIAALISGLIDLNVLAHLVNMGTLSAFALVAVAVIV
MRRTHPDLPRAFKAPLVPILPALTVIFCLYLMLQLSGTAWISFSIWMVIGIAVYFLYSRKHSALNNSKDEEDAANL
>Mature_476_residues
MEEQAMKQIFQKKPIAKLMQESKQKTLARTLGALDLTMLGIGAIVGTGIFVLTGVVAAKHSGPAIILSFAIAALACAFAA
FCYAEFASSVPVSGSVYTYTYATMGEVFAFLIGWDLMLEYLLATSAVANGWSAYFQSLLKGFGIHIPTILSSAPGTGKGG
IIDLPAVLIILVMTVLLSRGVRESARVNNIMVFIKIAVVLIFIFAGFNYVKPENWTPFMPFGLDGVMAGAATVFFAFIGF
DAVSTAAEEVKRPQRDLPIGIIASLLICTVLYIVVSLILTGIVPYGQLNISDPVAFALQFIGQDSLAGVISVGAITGITT
VMLVMMYGQVRVSYAMSRDGLLPKRLAKVHPKFKTPFLNTWTTGIIAALISGLIDLNVLAHLVNMGTLSAFALVAVAVIV
MRRTHPDLPRAFKAPLVPILPALTVIFCLYLMLQLSGTAWISFSIWMVIGIAVYFLYSRKHSALNNSKDEEDAANL

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI4507047, Length=440, Percent_Identity=38.8636363636364, Blast_Score=288, Evalue=8e-78,
Organism=Homo sapiens, GI258614005, Length=409, Percent_Identity=40.5867970660147, Blast_Score=287, Evalue=2e-77,
Organism=Homo sapiens, GI258614003, Length=409, Percent_Identity=40.5867970660147, Blast_Score=286, Evalue=2e-77,
Organism=Homo sapiens, GI258645169, Length=409, Percent_Identity=40.3422982885086, Blast_Score=280, Evalue=1e-75,
Organism=Homo sapiens, GI114326544, Length=442, Percent_Identity=36.8778280542986, Blast_Score=271, Evalue=8e-73,
Organism=Homo sapiens, GI114326550, Length=442, Percent_Identity=36.8778280542986, Blast_Score=271, Evalue=8e-73,
Organism=Homo sapiens, GI110347453, Length=407, Percent_Identity=38.8206388206388, Blast_Score=257, Evalue=2e-68,
Organism=Homo sapiens, GI181337167, Length=410, Percent_Identity=38.2926829268293, Blast_Score=256, Evalue=4e-68,
Organism=Homo sapiens, GI186910308, Length=421, Percent_Identity=24.4655581947743, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI186910306, Length=421, Percent_Identity=24.4655581947743, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI186910304, Length=421, Percent_Identity=24.4655581947743, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI187423910, Length=458, Percent_Identity=25.3275109170306, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI7657591, Length=458, Percent_Identity=25.3275109170306, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI7657683, Length=376, Percent_Identity=27.6595744680851, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI71979932, Length=429, Percent_Identity=25.6410256410256, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI115648063, Length=433, Percent_Identity=24.0184757505774, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI115648022, Length=433, Percent_Identity=24.0184757505774, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI33286428, Length=460, Percent_Identity=24.3478260869565, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI71999149, Length=411, Percent_Identity=25.3041362530414, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI87082023, Length=472, Percent_Identity=26.0593220338983, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI87081869, Length=438, Percent_Identity=26.2557077625571, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1788480, Length=449, Percent_Identity=25.6124721603563, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI87081708, Length=489, Percent_Identity=22.2903885480573, Blast_Score=99, Evalue=9e-22,
Organism=Escherichia coli, GI87082250, Length=352, Percent_Identity=28.125, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI1786302, Length=476, Percent_Identity=24.5798319327731, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1786694, Length=423, Percent_Identity=24.113475177305, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1789017, Length=354, Percent_Identity=22.316384180791, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1786602, Length=415, Percent_Identity=23.3734939759036, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1786789, Length=364, Percent_Identity=22.2527472527473, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI2367353, Length=377, Percent_Identity=24.6684350132626, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786908, Length=425, Percent_Identity=22.3529411764706, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1790653, Length=442, Percent_Identity=19.4570135746606, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI87081915, Length=424, Percent_Identity=21.4622641509434, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI48994972, Length=347, Percent_Identity=22.7665706051873, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=388, Percent_Identity=37.8865979381443, Blast_Score=258, Evalue=3e-69,
Organism=Caenorhabditis elegans, GI17531343, Length=415, Percent_Identity=37.8313253012048, Blast_Score=251, Evalue=5e-67,
Organism=Caenorhabditis elegans, GI17533459, Length=412, Percent_Identity=35.1941747572816, Blast_Score=237, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI17540018, Length=433, Percent_Identity=26.5588914549654, Blast_Score=98, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17568033, Length=447, Percent_Identity=26.8456375838926, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71982612, Length=434, Percent_Identity=22.3502304147465, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71982608, Length=434, Percent_Identity=22.3502304147465, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI32566695, Length=436, Percent_Identity=25, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI193208714, Length=428, Percent_Identity=24.7663551401869, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17537453, Length=376, Percent_Identity=23.4042553191489, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI32566699, Length=356, Percent_Identity=25.2808988764045, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71993915, Length=391, Percent_Identity=23.5294117647059, Blast_Score=65, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6319991, Length=359, Percent_Identity=26.7409470752089, Blast_Score=74, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6321751, Length=466, Percent_Identity=22.5321888412017, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24666159, Length=422, Percent_Identity=36.9668246445498, Blast_Score=294, Evalue=9e-80,
Organism=Drosophila melanogaster, GI221512776, Length=422, Percent_Identity=36.9668246445498, Blast_Score=294, Evalue=1e-79,
Organism=Drosophila melanogaster, GI24667468, Length=416, Percent_Identity=38.7019230769231, Blast_Score=284, Evalue=1e-76,
Organism=Drosophila melanogaster, GI24668806, Length=412, Percent_Identity=37.8640776699029, Blast_Score=280, Evalue=1e-75,
Organism=Drosophila melanogaster, GI21356285, Length=412, Percent_Identity=37.8640776699029, Blast_Score=280, Evalue=1e-75,
Organism=Drosophila melanogaster, GI24668802, Length=412, Percent_Identity=37.8640776699029, Blast_Score=280, Evalue=1e-75,
Organism=Drosophila melanogaster, GI161077963, Length=424, Percent_Identity=36.7924528301887, Blast_Score=251, Evalue=8e-67,
Organism=Drosophila melanogaster, GI281366235, Length=411, Percent_Identity=36.2530413625304, Blast_Score=228, Evalue=7e-60,
Organism=Drosophila melanogaster, GI116007820, Length=411, Percent_Identity=36.2530413625304, Blast_Score=228, Evalue=7e-60,
Organism=Drosophila melanogaster, GI116007818, Length=397, Percent_Identity=36.272040302267, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI85725152, Length=397, Percent_Identity=36.272040302267, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI21357367, Length=429, Percent_Identity=25.6410256410256, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI221331183, Length=494, Percent_Identity=25.7085020242915, Blast_Score=95, Evalue=8e-20,
Organism=Drosophila melanogaster, GI17647653, Length=494, Percent_Identity=25.7085020242915, Blast_Score=95, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24664379, Length=494, Percent_Identity=25.7085020242915, Blast_Score=95, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24651635, Length=418, Percent_Identity=25.8373205741627, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24651633, Length=418, Percent_Identity=25.8373205741627, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI45550968, Length=431, Percent_Identity=23.2018561484919, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI19921172, Length=431, Percent_Identity=23.2018561484919, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24641993, Length=421, Percent_Identity=25.1781472684086, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24641995, Length=421, Percent_Identity=25.1781472684086, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR015606 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 51140; Mature: 51140

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]