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The map label for this gene is oppC [H]

Identifier: 118475984

GI number: 118475984

Start: 232044

End: 232967

Strand: Direct

Name: oppC [H]

Synonym: BALH_0221

Alternate gene names: 118475984

Gene position: 232044-232967 (Clockwise)

Preceding gene: 118475983

Following gene: 118475985

Centisome position: 4.41

GC content: 37.88

Gene sequence:

>924_bases
ATGGAGACTATTACACCAATAATAGAGAAAAAGAAAGAACGGAAAAAGAGAAACGAATCATCACCATGGCGCCAAGCGTA
TAAAAAAATTAAGAAAAATAAGATGGCGTTATATGGATTATACGTTTTAATATTTATGTTTTTATTTAGTTTTATCGGTC
CAATCTTTTCACCATATGCTGATGGAAAAGTACAAGTAACACAAATTAATAAACCACCCAACCTATCACATTGGCTTGGA
ACAGACCAATTGGGACGAGATATTTTAACTAGACTTATGCAAGCAGGACGTATTTCATTAACGATTGGTTTAGCGTCGAT
GCTACTATCCGTTATACTAGGTGCTTTATTAGGAGCAATTGCTGGTTTTTATCGAGGTATTGTAGACCATTTAATTATGC
GTGTTGCAGATGTGTTAATGTCCATTCCGGGATTACCGTTACTTATTATAATGGGAGCAATCTTATCAGAATGGAAATTG
CCATCGGAATACCGTTTATATGTTGTAATGATTATTTTAAGTTTAGTAGGATGGCCAGGACTTGCCCGTCTTGTGAGAGG
ACAAATTTTAACGTTGCGGGAGCAAGCCTTTATGCAAGCAGCAGATGTATTAGGATTAAAGGATTCTCGGAAAATTATTC
ATCATTTAGTTCCTAACGTCTTACCGTTGCTTATTGTTGTAGCAACTTTGGGTGTGGCTGGATCTATTTTAAGTGAATCC
GCACTAAGCTACTTAGGTCTCGGCGTTGTCCCACCTACACCATCATGGGGGAATATGATTAGTGCAGCGAACTCATTACT
TGATTTCCAAAAGCGCCCATGGTTATGGATTCCGCCTGGTTTTGCAATCTTTATAACAGTTGTATCCATTAATTTACTTG
GTGATGCACTTCGTGATGCGTTAGATCCAAAGATGAGACGGTAG

Upstream 100 bases:

>100_bases
GATGTTTCTTTCATGTTTAACAATTATGGCAAATTTCTTAGCGGATATTGTATATGCGTTTGTTGATCCAAGAATTCGCT
TGAAGTAAGGGGGGAAAGAT

Downstream 100 bases:

>100_bases
GTGAGGGAATATGAGTAAAGCGGTAGTAGAGCTGAAAGATTTACAAACACACTTTCAGACAGAAGAAGGAACAGTAAAAG
CTGTGAATCATGTTAGTTTT

Product: oligopeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
METITPIIEKKKERKKRNESSPWRQAYKKIKKNKMALYGLYVLIFMFLFSFIGPIFSPYADGKVQVTQINKPPNLSHWLG
TDQLGRDILTRLMQAGRISLTIGLASMLLSVILGALLGAIAGFYRGIVDHLIMRVADVLMSIPGLPLLIIMGAILSEWKL
PSEYRLYVVMIILSLVGWPGLARLVRGQILTLREQAFMQAADVLGLKDSRKIIHHLVPNVLPLLIVVATLGVAGSILSES
ALSYLGLGVVPPTPSWGNMISAANSLLDFQKRPWLWIPPGFAIFITVVSINLLGDALRDALDPKMRR

Sequences:

>Translated_307_residues
METITPIIEKKKERKKRNESSPWRQAYKKIKKNKMALYGLYVLIFMFLFSFIGPIFSPYADGKVQVTQINKPPNLSHWLG
TDQLGRDILTRLMQAGRISLTIGLASMLLSVILGALLGAIAGFYRGIVDHLIMRVADVLMSIPGLPLLIIMGAILSEWKL
PSEYRLYVVMIILSLVGWPGLARLVRGQILTLREQAFMQAADVLGLKDSRKIIHHLVPNVLPLLIVVATLGVAGSILSES
ALSYLGLGVVPPTPSWGNMISAANSLLDFQKRPWLWIPPGFAIFITVVSINLLGDALRDALDPKMRR
>Mature_307_residues
METITPIIEKKKERKKRNESSPWRQAYKKIKKNKMALYGLYVLIFMFLFSFIGPIFSPYADGKVQVTQINKPPNLSHWLG
TDQLGRDILTRLMQAGRISLTIGLASMLLSVILGALLGAIAGFYRGIVDHLIMRVADVLMSIPGLPLLIIMGAILSEWKL
PSEYRLYVVMIILSLVGWPGLARLVRGQILTLREQAFMQAADVLGLKDSRKIIHHLVPNVLPLLIVVATLGVAGSILSES
ALSYLGLGVVPPTPSWGNMISAANSLLDFQKRPWLWIPPGFAIFITVVSINLLGDALRDALDPKMRR

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=293, Percent_Identity=36.1774744027304, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1787498, Length=305, Percent_Identity=35.7377049180328, Blast_Score=167, Evalue=6e-43,
Organism=Escherichia coli, GI1787760, Length=301, Percent_Identity=32.2259136212625, Blast_Score=160, Evalue=8e-41,
Organism=Escherichia coli, GI1789889, Length=248, Percent_Identity=39.9193548387097, Blast_Score=157, Evalue=7e-40,
Organism=Escherichia coli, GI1789964, Length=295, Percent_Identity=36.6101694915254, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1788505, Length=234, Percent_Identity=31.1965811965812, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1787549, Length=285, Percent_Identity=30.1754385964912, Blast_Score=108, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34060; Mature: 34060

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METITPIIEKKKERKKRNESSPWRQAYKKIKKNKMALYGLYVLIFMFLFSFIGPIFSPYA
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DGKVQVTQINKPPNLSHWLGTDQLGRDILTRLMQAGRISLTIGLASMLLSVILGALLGAI
CCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AGFYRGIVDHLIMRVADVLMSIPGLPLLIIMGAILSEWKLPSEYRLYVVMIILSLVGWPG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHH
LARLVRGQILTLREQAFMQAADVLGLKDSRKIIHHLVPNVLPLLIVVATLGVAGSILSES
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSYLGLGVVPPTPSWGNMISAANSLLDFQKRPWLWIPPGFAIFITVVSINLLGDALRDA
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHH
LDPKMRR
CCCCCCC
>Mature Secondary Structure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CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]