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The map label for this gene is oppB [H]

Identifier: 118475983

GI number: 118475983

Start: 231060

End: 232031

Strand: Direct

Name: oppB [H]

Synonym: BALH_0220

Alternate gene names: 118475983

Gene position: 231060-232031 (Clockwise)

Preceding gene: 118475982

Following gene: 118475984

Centisome position: 4.4

GC content: 32.82

Gene sequence:

>972_bases
TTGGGGAGACAAAAGGTGAAAACATATATCATTCGTAGGTTCCTTCAAATGATCCCTACATTGTTTGGTACATCTATTAT
TATTTTTTTCTTATTTGCACTTTTGCCGGGAGATTATATTGATTCAAATCCAAAATTAACACCAGAGAGAGCCCAAGAAT
TAAGGGAATTATACGGCTTAAACAAACCAATTATTGAAAGGTATTTTCATTGGTTAGTGAATGCTTTGCATGGTGATTTT
GGATTTTCTTTACAGTATCAAGAACCGGTAACTTCATTACTTAATAAATTCATTTGGAATACATTTATTGTTGCTGTTGC
AGCTTTATTTTTCACTTGGATTATTGCTCTTATTATTGGGGTTATTTCTGCAACAAAGCAGCACTCTTGGTTTGATAGAT
TGGTAACAATCGGTGTCTTTGCAGCAATGTCATTTCCATCATTCTTTATTGGACTATTTTTAATTAAATTATTAGCAGTT
GATTTAAAGTTATTACCTATTGGTGGCATGATTGATATTGGGAGTAACTCAACAGGGATAGCATACATATTAGAGGTATT
ACGTCATATGGTTCTACCTGTATTTATTTTAACGCTTCTTGGTGTAGGATCGTTAACACGATATTTTAGAACTGGCATGT
TGGATGTTATTAGACAAGATTATATTCGTACCGCTCGTGCAAAAGGTTTAAAAGAAAGAACCGTTATTTATAAACATGCA
TTGAAAAATGCAATTTTGCCAGCAATTACATTACTCGCTTTTGAATTACCGGGTTTATTTTCAGGAGCTATTATTATTGA
ACAGATTTTTAATTGGCCAGGGATTGGGAGTATTCAATTAGAAGCATTAAACTTCCGTGATTATACGGTATTAATGGCCT
TTACGATGTTTCTTTCATGTTTAACAATTATGGCAAATTTCTTAGCGGATATTGTATATGCGTTTGTTGATCCAAGAATT
CGCTTGAAGTAA

Upstream 100 bases:

>100_bases
ACAATAAGGGTTGACCTAAATAATAGAAGACGTTTTTTCACACAGCAATGAAATGGTAGCTGTTTTGAAAAAATGTTCTT
CTATTTTTAAGTAAATAGGA

Downstream 100 bases:

>100_bases
GGGGGGAAAGATATGGAGACTATTACACCAATAATAGAGAAAAAGAAAGAACGGAAAAAGAGAAACGAATCATCACCATG
GCGCCAAGCGTATAAAAAAA

Product: oligopeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MGRQKVKTYIIRRFLQMIPTLFGTSIIIFFLFALLPGDYIDSNPKLTPERAQELRELYGLNKPIIERYFHWLVNALHGDF
GFSLQYQEPVTSLLNKFIWNTFIVAVAALFFTWIIALIIGVISATKQHSWFDRLVTIGVFAAMSFPSFFIGLFLIKLLAV
DLKLLPIGGMIDIGSNSTGIAYILEVLRHMVLPVFILTLLGVGSLTRYFRTGMLDVIRQDYIRTARAKGLKERTVIYKHA
LKNAILPAITLLAFELPGLFSGAIIIEQIFNWPGIGSIQLEALNFRDYTVLMAFTMFLSCLTIMANFLADIVYAFVDPRI
RLK

Sequences:

>Translated_323_residues
MGRQKVKTYIIRRFLQMIPTLFGTSIIIFFLFALLPGDYIDSNPKLTPERAQELRELYGLNKPIIERYFHWLVNALHGDF
GFSLQYQEPVTSLLNKFIWNTFIVAVAALFFTWIIALIIGVISATKQHSWFDRLVTIGVFAAMSFPSFFIGLFLIKLLAV
DLKLLPIGGMIDIGSNSTGIAYILEVLRHMVLPVFILTLLGVGSLTRYFRTGMLDVIRQDYIRTARAKGLKERTVIYKHA
LKNAILPAITLLAFELPGLFSGAIIIEQIFNWPGIGSIQLEALNFRDYTVLMAFTMFLSCLTIMANFLADIVYAFVDPRI
RLK
>Mature_322_residues
GRQKVKTYIIRRFLQMIPTLFGTSIIIFFLFALLPGDYIDSNPKLTPERAQELRELYGLNKPIIERYFHWLVNALHGDFG
FSLQYQEPVTSLLNKFIWNTFIVAVAALFFTWIIALIIGVISATKQHSWFDRLVTIGVFAAMSFPSFFIGLFLIKLLAVD
LKLLPIGGMIDIGSNSTGIAYILEVLRHMVLPVFILTLLGVGSLTRYFRTGMLDVIRQDYIRTARAKGLKERTVIYKHAL
KNAILPAITLLAFELPGLFSGAIIIEQIFNWPGIGSIQLEALNFRDYTVLMAFTMFLSCLTIMANFLADIVYAFVDPRIR
LK

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=318, Percent_Identity=32.3899371069182, Blast_Score=210, Evalue=1e-55,
Organism=Escherichia coli, GI1789965, Length=335, Percent_Identity=33.7313432835821, Blast_Score=205, Evalue=4e-54,
Organism=Escherichia coli, GI1787497, Length=317, Percent_Identity=35.6466876971609, Blast_Score=191, Evalue=6e-50,
Organism=Escherichia coli, GI1789888, Length=318, Percent_Identity=33.3333333333333, Blast_Score=171, Evalue=6e-44,
Organism=Escherichia coli, GI1787761, Length=327, Percent_Identity=30.5810397553517, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1788504, Length=360, Percent_Identity=28.0555555555556, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1787550, Length=268, Percent_Identity=27.9850746268657, Blast_Score=129, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36717; Mature: 36586

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GRQKVKTYIIRRFLQMIPTLFGTSIIIFFLFALLPGDYIDSNPKLTPERAQELRELYGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
NKPIIERYFHWLVNALHGDFGFSLQYQEPVTSLLNKFIWNTFIVAVAALFFTWIIALIIG
CHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VISATKQHSWFDRLVTIGVFAAMSFPSFFIGLFLIKLLAVDLKLLPIGGMIDIGSNSTGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHH
AYILEVLRHMVLPVFILTLLGVGSLTRYFRTGMLDVIRQDYIRTARAKGLKERTVIYKHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LKNAILPAITLLAFELPGLFSGAIIIEQIFNWPGIGSIQLEALNFRDYTVLMAFTMFLSC
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
LTIMANFLADIVYAFVDPRIRLK
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]