| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920061
Identifier: 117920061
GI number: 117920061
Start: 1896738
End: 1898720
Strand: Direct
Name: 117920061
Synonym: Shewana3_1613
Alternate gene names: NA
Gene position: 1896738-1898720 (Clockwise)
Preceding gene: 117920060
Following gene: 117920065
Centisome position: 38.15
GC content: 32.63
Gene sequence:
>1983_bases ATGAAAAAATCAAAACTGATGAAAATTTTGATTTTATCTTCACTGATAGCATCAACATCAACATTTGCTGACACAAGTTA TATTGTTAAGTGGAATGATGTTTCTCAATTAAACTCAATGAAAGATGATTCTTTTGTTAACAATGTAAAAGTAAAATTTT TCGAAAGAACAACATTTGGAGGTTATTCTGTAATTGTTGTTGAAGATAATGTTGATTTAACGATTTCAAGATTAACTGAT AGTGGATTATTTGCCTCTGTTGTGGAAAATACTAAAATTCATTTTGAAAAAAATGAAACTACAATTCCTGTAAAATTAAA TCAAGCTAACATTGTTCTAAAGCCCAAGAATCCAATAACTTATTCAATTGATTTGAATAAATTTAAAGATCCTCTTGTTG AAAATGAATATTACCATGATGCGCAAAAAGATTTTACAAATGGTGCAACTTCAGCGTTAGAAGCAAAATCAGTTTTTAAA AATAATCTTGGCAGGAAAGCAAGAGTAGCTGTGTTAGATTCTGGTTATTTTCCACATGAAGATATGGAAACGCCAAAAGA ACAAGCAAAATTCATTAAATCAGCAATGTACTATTTTCCAGAAGGGAATTATGCGTATAATTTAGCCTTGAATTGTTTAA CGCAAGATCCCACAAACTCAGGATTGGATGCTACGTGTGATGCTTCAAACATTGTAACACTTGGAGATCAAACTAATAAT GCATTAGATAAATCATGGAAGCCATCTAAATTTGTTTACAATGAACAAACAAAACTAAATGATCCTACAGAATATAAAAT CTGTATTAACGGTCATGGACTTAGTGTAGCGTCATCTATTGCTGCTATTCAAAACAATGGTAAAGGCATTGCCTCAGCAG TAGGTTCAGAAAATATTGATATTGTACCAGTTAAAGTTATCGATTCTTGTACAGGTTCGGCTTTAACATCTGATTTAATT AAAGCTATCTATTGGGCTGCTAAAAGTGATGACACATTTGAAGGATTGGAACCAATTTCTGAACCTGTTGATGTGATCAA TTTAAGCTTAGGCTCAAATAAAAATGAGCTTTGTGAAGTTGGATACAATGCTTTTGCTGATGCTGTAGATTATGCAAAAC AGAAAGGTATTGTGGTTGTTGCAGCATTAGGTAACGATGGTGTATCTGGTGATATATTTACGCCAGCAACATGTAACGGT GTTATTCCTGTGTCGTCAAATAACGTACATGGACAACTATCATATTTCTCAAGTTACCTAAGTGATAAAAGAACATTGTC AACAATTGGTGAAGATATGACGTTGCCCAAGGTAACAACTACAACGTATATTGACAGAAATTTTATTGATACAAACTGTC AAGGTAGTATTGAATCTTGCTATGCTACAGGACAAGGAACGAGTTACTCAGCACCTATTGTATCTGGTTTAGTTTCTATG GTGTTGATGCAAAACCCTAGTTTAAACCCTGATGAAATTTTCAATGTTATTTATGACTCTGGCAATAAATTTCATGTGAA TGAGGCGGGTAATTCCACTAACATGTTTAGAAATGCACCAGAAAACAGAATTATCAATTTTAAAGAAGCTTTGTTAGCTG CTGATAATGAAACTTTACATGTTGGTAAAACTACTGTTTCTCATTCAATGAATGGAGCAAGTGATAAATATGTTCAGAAA ATGATCAGCTCACATGGAAAGGATAATGTTTGTTCAACGTATAAACTTGATTGGCAAGATGTTTATCAATCAAATTCAAA AGGTGTTGATTTTGAAGTATATGGAACAAATGCTGCAGAAGCAATGACAGTTTCAAATTCAACTTTAATTGAAACTGATG ACAAATCACCTCGCTTACAAACTAGCTTAGTTATCAAAAAAGACTTTGCTAATTATGGCGTAAGAGTCTGTAAGATTGGC AAGTGTTCTGAGATTAAAGAGTTCGATTTTAGCACTGCCGAGTTAAATATTTCTTGCTTGTAA
Upstream 100 bases:
>100_bases CTACACAGTATGATTTTTTAAATGATATTTTGATGCATTAGATGTTAATTTAAATATGATTTATAGTTTTAATGTTGAAT AATATAGTAAGGGATAAAAA
Downstream 100 bases:
>100_bases AATTTATGACATATATTCCTTTGATTATCTAACCGTACCATTATTTTTTTGAGGTAACAAATGGCAATATCCATCAAGAT TCGGGAAGGGTATTGCTAAA
Product: rRNA (guanine-N(1)-)-methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 660; Mature: 660
Protein sequence:
>660_residues MKKSKLMKILILSSLIASTSTFADTSYIVKWNDVSQLNSMKDDSFVNNVKVKFFERTTFGGYSVIVVEDNVDLTISRLTD SGLFASVVENTKIHFEKNETTIPVKLNQANIVLKPKNPITYSIDLNKFKDPLVENEYYHDAQKDFTNGATSALEAKSVFK NNLGRKARVAVLDSGYFPHEDMETPKEQAKFIKSAMYYFPEGNYAYNLALNCLTQDPTNSGLDATCDASNIVTLGDQTNN ALDKSWKPSKFVYNEQTKLNDPTEYKICINGHGLSVASSIAAIQNNGKGIASAVGSENIDIVPVKVIDSCTGSALTSDLI KAIYWAAKSDDTFEGLEPISEPVDVINLSLGSNKNELCEVGYNAFADAVDYAKQKGIVVVAALGNDGVSGDIFTPATCNG VIPVSSNNVHGQLSYFSSYLSDKRTLSTIGEDMTLPKVTTTTYIDRNFIDTNCQGSIESCYATGQGTSYSAPIVSGLVSM VLMQNPSLNPDEIFNVIYDSGNKFHVNEAGNSTNMFRNAPENRIINFKEALLAADNETLHVGKTTVSHSMNGASDKYVQK MISSHGKDNVCSTYKLDWQDVYQSNSKGVDFEVYGTNAAEAMTVSNSTLIETDDKSPRLQTSLVIKKDFANYGVRVCKIG KCSEIKEFDFSTAELNISCL
Sequences:
>Translated_660_residues MKKSKLMKILILSSLIASTSTFADTSYIVKWNDVSQLNSMKDDSFVNNVKVKFFERTTFGGYSVIVVEDNVDLTISRLTD SGLFASVVENTKIHFEKNETTIPVKLNQANIVLKPKNPITYSIDLNKFKDPLVENEYYHDAQKDFTNGATSALEAKSVFK NNLGRKARVAVLDSGYFPHEDMETPKEQAKFIKSAMYYFPEGNYAYNLALNCLTQDPTNSGLDATCDASNIVTLGDQTNN ALDKSWKPSKFVYNEQTKLNDPTEYKICINGHGLSVASSIAAIQNNGKGIASAVGSENIDIVPVKVIDSCTGSALTSDLI KAIYWAAKSDDTFEGLEPISEPVDVINLSLGSNKNELCEVGYNAFADAVDYAKQKGIVVVAALGNDGVSGDIFTPATCNG VIPVSSNNVHGQLSYFSSYLSDKRTLSTIGEDMTLPKVTTTTYIDRNFIDTNCQGSIESCYATGQGTSYSAPIVSGLVSM VLMQNPSLNPDEIFNVIYDSGNKFHVNEAGNSTNMFRNAPENRIINFKEALLAADNETLHVGKTTVSHSMNGASDKYVQK MISSHGKDNVCSTYKLDWQDVYQSNSKGVDFEVYGTNAAEAMTVSNSTLIETDDKSPRLQTSLVIKKDFANYGVRVCKIG KCSEIKEFDFSTAELNISCL >Mature_660_residues MKKSKLMKILILSSLIASTSTFADTSYIVKWNDVSQLNSMKDDSFVNNVKVKFFERTTFGGYSVIVVEDNVDLTISRLTD SGLFASVVENTKIHFEKNETTIPVKLNQANIVLKPKNPITYSIDLNKFKDPLVENEYYHDAQKDFTNGATSALEAKSVFK NNLGRKARVAVLDSGYFPHEDMETPKEQAKFIKSAMYYFPEGNYAYNLALNCLTQDPTNSGLDATCDASNIVTLGDQTNN ALDKSWKPSKFVYNEQTKLNDPTEYKICINGHGLSVASSIAAIQNNGKGIASAVGSENIDIVPVKVIDSCTGSALTSDLI KAIYWAAKSDDTFEGLEPISEPVDVINLSLGSNKNELCEVGYNAFADAVDYAKQKGIVVVAALGNDGVSGDIFTPATCNG VIPVSSNNVHGQLSYFSSYLSDKRTLSTIGEDMTLPKVTTTTYIDRNFIDTNCQGSIESCYATGQGTSYSAPIVSGLVSM VLMQNPSLNPDEIFNVIYDSGNKFHVNEAGNSTNMFRNAPENRIINFKEALLAADNETLHVGKTTVSHSMNGASDKYVQK MISSHGKDNVCSTYKLDWQDVYQSNSKGVDFEVYGTNAAEAMTVSNSTLIETDDKSPRLQTSLVIKKDFANYGVRVCKIG KCSEIKEFDFSTAELNISCL
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR002884 [H]
Pfam domain/function: PF01483 P_proprotein; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 72207; Mature: 72207
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSKLMKILILSSLIASTSTFADTSYIVKWNDVSQLNSMKDDSFVNNVKVKFFERTTFG CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHCCCCCCHHCCEEEEEEEEECCC GYSVIVVEDNVDLTISRLTDSGLFASVVENTKIHFEKNETTIPVKLNQANIVLKPKNPIT CEEEEEEECCCCEEEEEECCCCHHHHHHCCCEEEEECCCEEEEEEECCCEEEEECCCCEE YSIDLNKFKDPLVENEYYHDAQKDFTNGATSALEAKSVFKNNLGRKARVAVLDSGYFPHE EEEECHHCCCCCCCCCHHCCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC DMETPKEQAKFIKSAMYYFPEGNYAYNLALNCLTQDPTNSGLDATCDASNIVTLGDQTNN CCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCC ALDKSWKPSKFVYNEQTKLNDPTEYKICINGHGLSVASSIAAIQNNGKGIASAVGSENID CCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHCCCCCCE IVPVKVIDSCTGSALTSDLIKAIYWAAKSDDTFEGLEPISEPVDVINLSLGSNKNELCEV EEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEEECCCCHHHHHHH GYNAFADAVDYAKQKGIVVVAALGNDGVSGDIFTPATCNGVIPVSSNNVHGQLSYFSSYL CHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEECCCCCCCEEEECCCCCCEEHHHHHHHH SDKRTLSTIGEDMTLPKVTTTTYIDRNFIDTNCQGSIESCYATGQGTSYSAPIVSGLVSM CCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHEECCCCCCCCCHHHHHHHHH VLMQNPSLNPDEIFNVIYDSGNKFHVNEAGNSTNMFRNAPENRIINFKEALLAADNETLH HHHCCCCCCHHHHHHHEECCCCEEEEECCCCCCHHHCCCCCCCEEEHHHHHHCCCCCEEE VGKTTVSHSMNGASDKYVQKMISSHGKDNVCSTYKLDWQDVYQSNSKGVDFEVYGTNAAE ECCHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEECCHHHHHCCCCCCCEEEEECCCCCC AMTVSNSTLIETDDKSPRLQTSLVIKKDFANYGVRVCKIGKCSEIKEFDFSTAELNISCL EEEECCCEEEECCCCCCCEEEEEEEEEHHHHCCEEEEECCCCCCHHHCCCCEEEEEEEEC >Mature Secondary Structure MKKSKLMKILILSSLIASTSTFADTSYIVKWNDVSQLNSMKDDSFVNNVKVKFFERTTFG CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHCCCCCCHHCCEEEEEEEEECCC GYSVIVVEDNVDLTISRLTDSGLFASVVENTKIHFEKNETTIPVKLNQANIVLKPKNPIT CEEEEEEECCCCEEEEEECCCCHHHHHHCCCEEEEECCCEEEEEEECCCEEEEECCCCEE YSIDLNKFKDPLVENEYYHDAQKDFTNGATSALEAKSVFKNNLGRKARVAVLDSGYFPHE EEEECHHCCCCCCCCCHHCCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC DMETPKEQAKFIKSAMYYFPEGNYAYNLALNCLTQDPTNSGLDATCDASNIVTLGDQTNN CCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCC ALDKSWKPSKFVYNEQTKLNDPTEYKICINGHGLSVASSIAAIQNNGKGIASAVGSENID CCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHCCCCCCE IVPVKVIDSCTGSALTSDLIKAIYWAAKSDDTFEGLEPISEPVDVINLSLGSNKNELCEV EEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEEECCCCHHHHHHH GYNAFADAVDYAKQKGIVVVAALGNDGVSGDIFTPATCNGVIPVSSNNVHGQLSYFSSYL CHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEECCCCCCCEEEECCCCCCEEHHHHHHHH SDKRTLSTIGEDMTLPKVTTTTYIDRNFIDTNCQGSIESCYATGQGTSYSAPIVSGLVSM CCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHEECCCCCCCCCHHHHHHHHH VLMQNPSLNPDEIFNVIYDSGNKFHVNEAGNSTNMFRNAPENRIINFKEALLAADNETLH HHHCCCCCCHHHHHHHEECCCCEEEEECCCCCCHHHCCCCCCCEEEHHHHHHCCCCCEEE VGKTTVSHSMNGASDKYVQKMISSHGKDNVCSTYKLDWQDVYQSNSKGVDFEVYGTNAAE ECCHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEECCHHHHHCCCCCCCEEEEECCCCCC AMTVSNSTLIETDDKSPRLQTSLVIKKDFANYGVRVCKIGKCSEIKEFDFSTAELNISCL EEEECCCEEEECCCCCCCEEEEEEEEEHHHHCCEEEEECCCCCCHHHCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA