| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920059
Identifier: 117920059
GI number: 117920059
Start: 1893968
End: 1894246
Strand: Direct
Name: 117920059
Synonym: Shewana3_1611
Alternate gene names: NA
Gene position: 1893968-1894246 (Clockwise)
Preceding gene: 117920058
Following gene: 117920060
Centisome position: 38.09
GC content: 37.63
Gene sequence:
>279_bases ATGAATGACGCAATTAAGCTTGCGCGGTTACAAAATGAGATGAAAAACTCAACCACGGCTTTAGTACTGGGTTTCTTAAT ACCGGGTGCAGGCCAGATGTACGCTGGTAGTGTGGGATACGGAATTATTAATTTTGTCTTGGTAGTGATACTTGCTATAA CTATTGTTGCCAGTCCTATAGCATTTATACTCTATGTACTTTCAATGTATTGGGGGTATAAAGGCGTAATTGCATTCAAT AATGAAGTAATTAGAAAAGCTGAAAGTCAAGAAAGTTGA
Upstream 100 bases:
>100_bases TCGTAAGTGGTTGTTGTTACAAGATGAATTAAAAATAAGTTATGTAGATAAAATGGCAATTTATAAAACGATATACAATG CAATCATGGGAGAGTAGCAA
Downstream 100 bases:
>100_bases TTCATTTCACTCATCAAAAAACCATTGAGCATCGTATTTCAATTATTTGCTGGAGATTTTGGGTTTAACTTCCAAATTAT TATGTCATTGCATCACACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MNDAIKLARLQNEMKNSTTALVLGFLIPGAGQMYAGSVGYGIINFVLVVILAITIVASPIAFILYVLSMYWGYKGVIAFN NEVIRKAESQES
Sequences:
>Translated_92_residues MNDAIKLARLQNEMKNSTTALVLGFLIPGAGQMYAGSVGYGIINFVLVVILAITIVASPIAFILYVLSMYWGYKGVIAFN NEVIRKAESQES >Mature_92_residues MNDAIKLARLQNEMKNSTTALVLGFLIPGAGQMYAGSVGYGIINFVLVVILAITIVASPIAFILYVLSMYWGYKGVIAFN NEVIRKAESQES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10002; Mature: 10002
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDAIKLARLQNEMKNSTTALVLGFLIPGAGQMYAGSVGYGIINFVLVVILAITIVASPI CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH AFILYVLSMYWGYKGVIAFNNEVIRKAESQES HHHHHHHHHHHCCCCEEEECHHHHHHHHCCCC >Mature Secondary Structure MNDAIKLARLQNEMKNSTTALVLGFLIPGAGQMYAGSVGYGIINFVLVVILAITIVASPI CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH AFILYVLSMYWGYKGVIAFNNEVIRKAESQES HHHHHHHHHHHCCCCEEEECHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA