| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is pgsA [H]
Identifier: 117920058
GI number: 117920058
Start: 1891758
End: 1892306
Strand: Direct
Name: pgsA [H]
Synonym: Shewana3_1610
Alternate gene names: 117920058
Gene position: 1891758-1892306 (Clockwise)
Preceding gene: 117920057
Following gene: 117920059
Centisome position: 38.05
GC content: 48.27
Gene sequence:
>549_bases ATGCCGTTTAACTTACCTATAGCATTAACCCTTTTTAGGCTTTTTTTACTGCCCATCTTCGTGGTGCTCTTTTATCTGCC GTACAGTTGGACTCCCTTCGTGGCTGCATTTGTGTTTTGGCTTGCCGCCATTACCGATGCCTTGGATGGCTATGCCGCCC GTAAACTCAAGCAACTCACGCGTTTTGGGGCTTTTCTCGATCCCGTTGCCGATAAACTAATGGTGATCACCGCGCTGGTG TTGCTGGTGGAGCAATATGCCGATATTTGGTTAACGTTGCCGGCACTGTTTATGATTGGTCGCGAAATTGTGATTTCAGC CCTACGTGAATGGATGGCTGAATTAGGTAAGCGCGGGACGGTTGCGGTTTCTTGGATCGGCAAATATAAAACGGCGGCGC AGATGGTGGCGATTATTGGCCTGATCTGGCAATACAACCCACTCATGATCACCGCGGCATTTGTGCTGTTATATATCGCT GCCGTGTTAACCTTCTGGTCAATGATGAGCTACATTTTAGCCGCTTGGAAAGATTTAACGGCTGAATAG
Upstream 100 bases:
>100_bases CCGGTATTAGCATAGAAATGGCACAAACCATTCATGATGCATTGCGAGGGTGATAAATTTAAGGCAAGATTGGCGCTGCT TTTGACTAACTGGTTTGATC
Downstream 100 bases:
>100_bases CACAATAAAAGATCAAAGAGATTATTTAGTGCGCAAGCAGTAAGTTATCGATAAAACAGCGGTTGACACTGCATGGTAAA TAGGTAGAATGCCTCCCCGT
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MPFNLPIALTLFRLFLLPIFVVLFYLPYSWTPFVAAFVFWLAAITDALDGYAARKLKQLTRFGAFLDPVADKLMVITALV LLVEQYADIWLTLPALFMIGREIVISALREWMAELGKRGTVAVSWIGKYKTAAQMVAIIGLIWQYNPLMITAAFVLLYIA AVLTFWSMMSYILAAWKDLTAE
Sequences:
>Translated_182_residues MPFNLPIALTLFRLFLLPIFVVLFYLPYSWTPFVAAFVFWLAAITDALDGYAARKLKQLTRFGAFLDPVADKLMVITALV LLVEQYADIWLTLPALFMIGREIVISALREWMAELGKRGTVAVSWIGKYKTAAQMVAIIGLIWQYNPLMITAAFVLLYIA AVLTFWSMMSYILAAWKDLTAE >Mature_181_residues PFNLPIALTLFRLFLLPIFVVLFYLPYSWTPFVAAFVFWLAAITDALDGYAARKLKQLTRFGAFLDPVADKLMVITALVL LVEQYADIWLTLPALFMIGREIVISALREWMAELGKRGTVAVSWIGKYKTAAQMVAIIGLIWQYNPLMITAAFVLLYIAA VLTFWSMMSYILAAWKDLTAE
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=179, Percent_Identity=60.3351955307263, Blast_Score=214, Evalue=3e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 20626; Mature: 20495
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFNLPIALTLFRLFLLPIFVVLFYLPYSWTPFVAAFVFWLAAITDALDGYAARKLKQLT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFGAFLDPVADKLMVITALVLLVEQYADIWLTLPALFMIGREIVISALREWMAELGKRGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VAVSWIGKYKTAAQMVAIIGLIWQYNPLMITAAFVLLYIAAVLTFWSMMSYILAAWKDLT CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AE CC >Mature Secondary Structure PFNLPIALTLFRLFLLPIFVVLFYLPYSWTPFVAAFVFWLAAITDALDGYAARKLKQLT CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFGAFLDPVADKLMVITALVLLVEQYADIWLTLPALFMIGREIVISALREWMAELGKRGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VAVSWIGKYKTAAQMVAIIGLIWQYNPLMITAAFVLLYIAAVLTFWSMMSYILAAWKDLT CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA