| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920041
Identifier: 117920041
GI number: 117920041
Start: 1869518
End: 1870642
Strand: Direct
Name: 117920041
Synonym: Shewana3_1593
Alternate gene names: NA
Gene position: 1869518-1870642 (Clockwise)
Preceding gene: 117920040
Following gene: 117920042
Centisome position: 37.6
GC content: 49.69
Gene sequence:
>1125_bases ATGAATAAGCACCCTAATGAGTCGCTGCAAACAAGCGGCGTATCTGAGGTACAAACCTTGTGGCAGAGTTTATATGCCAA GGGCGCAGTGAATACCCCAGAGTTGCCCGAATCCCAAGATATGCCCTGGTATATCGCCCTGATGCAAGCTGGTGCGGCCT GGATAGCCGCTTGGTTCTTATTAGGTTTTATGGTGTCACTTTTCGATAGCCTGTGGGGGCGATTCGAAGGGGGCACGGCA CTTTTTATCGGTGGCAGCTATTTAGGCTTAGGGCTTGCCTTATATTGGGGCGGGCGCCAACAACACTTTTTGCAGCAGTT TGCCTTTGCCTCCTGTTTAAGCGGCACGCTTGCTCTAGCTTGGGGGCTGTTTGATTTACTCGGCGAAGCGTTCAATCTTG CTTGGTATCTGAGCATGGCGGCATTGTTTTTTCTGCTTTGGGGGATTATCAAGCACGCTGTGGCTCAGTGGGTATTTGCA TTTGGTTGTAGTGTCTGTGTCACCGGCCTGTTGGCCGAGTGGCATCTGTTATCGTTTACGCCGACGCTGTGGCTATTGCT ATCGAGCATTATGCTACTCAATCTTCACCGCACTGGGCACCACTATCAAAGGGCGAGGATGTGGATTTTTGCCACCAGTG CAAATCTGCTCACCATTCAACTTATGCATGTGTTTAGTCTGGATAGCGAGTTTTCGCAGTTGTATGCCGTGGATTGGCAA TCGGGGATAACCGCAGTTCATTTACTGGTCGTGTTTGCCATCTGCAGCTTTTTACTCCTGAGTCTTTGTAAACAATGGCA GACTCCATTCACCCATCCCGCCATATTATTTGCGTTTTTAGGATTAGTGCTCATTACTGCACTGTCTTTCCCCATGGAGG GCTTATCAACGGCAGTGCTGCTGATATTGTTGGGGCACTACGGGCACGAGGCGTGGCTTAAGGGGATGGGTATCGCCTCC GGGCTAGTGTTTGCGGCGGGCTATTATTATTCCCTCGAGACCACTTTGATGCTTAAATCTCTGTATTTAATGGGATTAGG CGGAGTGCTTATTATCGCGAGGCTATTGATGTGGCGCTTTTTTCCGATCACGCAAGTGCAGGTTGAGCATAAGGAGCAAG CATAA
Upstream 100 bases:
>100_bases GCGAGCACAGGCTTAAGCACTGTGTTAAGGCGATTGCATCGGCAAGCTAAAGCGGGCATCTCGCCTACGCAGACTCCCAG TGAGAATGAGGAGCTAAGCC
Downstream 100 bases:
>100_bases TGGATAAAGCGACCTTAGCATTTAGCCGTTTCCATAAGCGCGCCTTAGTCTTAGTGGTGTTTACCGCCGCAGCACTGCTG ATAAGCATCAACTGGCGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MNKHPNESLQTSGVSEVQTLWQSLYAKGAVNTPELPESQDMPWYIALMQAGAAWIAAWFLLGFMVSLFDSLWGRFEGGTA LFIGGSYLGLGLALYWGGRQQHFLQQFAFASCLSGTLALAWGLFDLLGEAFNLAWYLSMAALFFLLWGIIKHAVAQWVFA FGCSVCVTGLLAEWHLLSFTPTLWLLLSSIMLLNLHRTGHHYQRARMWIFATSANLLTIQLMHVFSLDSEFSQLYAVDWQ SGITAVHLLVVFAICSFLLLSLCKQWQTPFTHPAILFAFLGLVLITALSFPMEGLSTAVLLILLGHYGHEAWLKGMGIAS GLVFAAGYYYSLETTLMLKSLYLMGLGGVLIIARLLMWRFFPITQVQVEHKEQA
Sequences:
>Translated_374_residues MNKHPNESLQTSGVSEVQTLWQSLYAKGAVNTPELPESQDMPWYIALMQAGAAWIAAWFLLGFMVSLFDSLWGRFEGGTA LFIGGSYLGLGLALYWGGRQQHFLQQFAFASCLSGTLALAWGLFDLLGEAFNLAWYLSMAALFFLLWGIIKHAVAQWVFA FGCSVCVTGLLAEWHLLSFTPTLWLLLSSIMLLNLHRTGHHYQRARMWIFATSANLLTIQLMHVFSLDSEFSQLYAVDWQ SGITAVHLLVVFAICSFLLLSLCKQWQTPFTHPAILFAFLGLVLITALSFPMEGLSTAVLLILLGHYGHEAWLKGMGIAS GLVFAAGYYYSLETTLMLKSLYLMGLGGVLIIARLLMWRFFPITQVQVEHKEQA >Mature_374_residues MNKHPNESLQTSGVSEVQTLWQSLYAKGAVNTPELPESQDMPWYIALMQAGAAWIAAWFLLGFMVSLFDSLWGRFEGGTA LFIGGSYLGLGLALYWGGRQQHFLQQFAFASCLSGTLALAWGLFDLLGEAFNLAWYLSMAALFFLLWGIIKHAVAQWVFA FGCSVCVTGLLAEWHLLSFTPTLWLLLSSIMLLNLHRTGHHYQRARMWIFATSANLLTIQLMHVFSLDSEFSQLYAVDWQ SGITAVHLLVVFAICSFLLLSLCKQWQTPFTHPAILFAFLGLVLITALSFPMEGLSTAVLLILLGHYGHEAWLKGMGIAS GLVFAAGYYYSLETTLMLKSLYLMGLGGVLIIARLLMWRFFPITQVQVEHKEQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41772; Mature: 41772
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKHPNESLQTSGVSEVQTLWQSLYAKGAVNTPELPESQDMPWYIALMQAGAAWIAAWFL CCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LGFMVSLFDSLWGRFEGGTALFIGGSYLGLGLALYWGGRQQHFLQQFAFASCLSGTLALA HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH WGLFDLLGEAFNLAWYLSMAALFFLLWGIIKHAVAQWVFAFGCSVCVTGLLAEWHLLSFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PTLWLLLSSIMLLNLHRTGHHYQRARMWIFATSANLLTIQLMHVFSLDSEFSQLYAVDWQ HHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHH SGITAVHLLVVFAICSFLLLSLCKQWQTPFTHPAILFAFLGLVLITALSFPMEGLSTAVL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH LILLGHYGHEAWLKGMGIASGLVFAAGYYYSLETTLMLKSLYLMGLGGVLIIARLLMWRF HHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FPITQVQVEHKEQA CCCHHEECCCCCCC >Mature Secondary Structure MNKHPNESLQTSGVSEVQTLWQSLYAKGAVNTPELPESQDMPWYIALMQAGAAWIAAWFL CCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LGFMVSLFDSLWGRFEGGTALFIGGSYLGLGLALYWGGRQQHFLQQFAFASCLSGTLALA HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH WGLFDLLGEAFNLAWYLSMAALFFLLWGIIKHAVAQWVFAFGCSVCVTGLLAEWHLLSFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PTLWLLLSSIMLLNLHRTGHHYQRARMWIFATSANLLTIQLMHVFSLDSEFSQLYAVDWQ HHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHH SGITAVHLLVVFAICSFLLLSLCKQWQTPFTHPAILFAFLGLVLITALSFPMEGLSTAVL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH LILLGHYGHEAWLKGMGIASGLVFAAGYYYSLETTLMLKSLYLMGLGGVLIIARLLMWRF HHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FPITQVQVEHKEQA CCCHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA