Click here to switch to the map view.

The map label for this gene is 117920042

Identifier: 117920042

GI number: 117920042

Start: 1870642

End: 1871157

Strand: Direct

Name: 117920042

Synonym: Shewana3_1594

Alternate gene names: NA

Gene position: 1870642-1871157 (Clockwise)

Preceding gene: 117920041

Following gene: 117920043

Centisome position: 37.62

GC content: 50.19

Gene sequence:

>516_bases
ATGGATAAAGCGACCTTAGCATTTAGCCGTTTCCATAAGCGCGCCTTAGTCTTAGTGGTGTTTACCGCCGCAGCACTGCT
GATAAGCATCAACTGGCGAATAGCCCAGTTTGAGCAGTTATTACAAGATGGCCAAGTGGTACGTTTTGCCTTAGCGCCAG
TGGATCCTCGCTCGATTATGCAGGGGGATTACATGGCCTTGGAGTATGCCATTGCGCAGGAGGTGCGCGCCGCACTGCCT
GAAGGGATGACGCAGGGGCAACTGCTGTTGACGCTCGACTCGCAAAAAGTGGCGCACTTTGTTGGTATTTACCGTGATCA
ACCCAAAACGGCTGAGCAACTCACGGTAGATTTTCGTCTGCGTAATCATAGAGTAAAGCTTGCCTCAAATAGTTTCTTCT
TCGAAGAGGGCCAAGCTGACCACTTCAGCCAAGCAAAGTATGGCGAGTTTAGAGTTAGCGATAAGGGAGAATTGTTGTTA
GTCAGCCTACTCGATGCGCAGTTGCAGCCGCTATAA

Upstream 100 bases:

>100_bases
ATTTAATGGGATTAGGCGGAGTGCTTATTATCGCGAGGCTATTGATGTGGCGCTTTTTTCCGATCACGCAAGTGCAGGTT
GAGCATAAGGAGCAAGCATA

Downstream 100 bases:

>100_bases
CGGGCTACTCTGATGATCTTTAACAAGATGGTGAGCCATGCCCGCCATCTTCGCTATTTTTCCTAGTCCAATCCGCTAAA
TCGCCGCCTAAATATCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MDKATLAFSRFHKRALVLVVFTAAALLISINWRIAQFEQLLQDGQVVRFALAPVDPRSIMQGDYMALEYAIAQEVRAALP
EGMTQGQLLLTLDSQKVAHFVGIYRDQPKTAEQLTVDFRLRNHRVKLASNSFFFEEGQADHFSQAKYGEFRVSDKGELLL
VSLLDAQLQPL

Sequences:

>Translated_171_residues
MDKATLAFSRFHKRALVLVVFTAAALLISINWRIAQFEQLLQDGQVVRFALAPVDPRSIMQGDYMALEYAIAQEVRAALP
EGMTQGQLLLTLDSQKVAHFVGIYRDQPKTAEQLTVDFRLRNHRVKLASNSFFFEEGQADHFSQAKYGEFRVSDKGELLL
VSLLDAQLQPL
>Mature_171_residues
MDKATLAFSRFHKRALVLVVFTAAALLISINWRIAQFEQLLQDGQVVRFALAPVDPRSIMQGDYMALEYAIAQEVRAALP
EGMTQGQLLLTLDSQKVAHFVGIYRDQPKTAEQLTVDFRLRNHRVKLASNSFFFEEGQADHFSQAKYGEFRVSDKGELLL
VSLLDAQLQPL

Specific function: Unknown

COG id: COG4929

COG function: function code S; Uncharacterized membrane-anchored protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19327; Mature: 19327

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKATLAFSRFHKRALVLVVFTAAALLISINWRIAQFEQLLQDGQVVRFALAPVDPRSIM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCHHHHH
QGDYMALEYAIAQEVRAALPEGMTQGQLLLTLDSQKVAHFVGIYRDQPKTAEQLTVDFRL
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHEEEEEEE
RNHRVKLASNSFFFEEGQADHFSQAKYGEFRVSDKGELLLVSLLDAQLQPL
ECCEEEEECCCEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEHHHHCCCC
>Mature Secondary Structure
MDKATLAFSRFHKRALVLVVFTAAALLISINWRIAQFEQLLQDGQVVRFALAPVDPRSIM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCHHHHH
QGDYMALEYAIAQEVRAALPEGMTQGQLLLTLDSQKVAHFVGIYRDQPKTAEQLTVDFRL
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHEEEEEEE
RNHRVKLASNSFFFEEGQADHFSQAKYGEFRVSDKGELLLVSLLDAQLQPL
ECCEEEEECCCEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA