| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919943
Identifier: 117919943
GI number: 117919943
Start: 1742421
End: 1743125
Strand: Direct
Name: 117919943
Synonym: Shewana3_1495
Alternate gene names: NA
Gene position: 1742421-1743125 (Clockwise)
Preceding gene: 117919942
Following gene: 117919944
Centisome position: 35.04
GC content: 51.35
Gene sequence:
>705_bases ATGCTGAGTCGCCAACGGCTGTTAATTGTCGTGCTGGCCGCGGGTGAGAGCAGGCGATTTCAGGGGATTAAACTGGCGCA GCCATTATCGACGTCCTCAAATGCAAATAGCGGGCAAAGCATCTTACAACACCATATCGATCGTCTGGCTCGTTTCACCT CGGCGCCATTGGTAATAGGGGCATCCAATCAAGTCAGCGTTTCGCTGCTGGTGGTGCTCGGTGCTCATGCTAACGAGCTG CGCCCTCAACTTGAGGCTCTTGGGGCGAATCAATTCACGCTACTGCATAATGCCGACTGGCAGACGGGTTTGTCATCGTC GCTGCGAGTCGCGGCGGATTATGCAAAAGCGCAGCAGTTTGATGGCATGTTACTCACCTTAGCGGATCAGGTCGCGCTGA CATTTGAAGACTATCGGCAGTTGATTGAGACTTGGCAGATGAGTCAGCAATCTGTGGCCGCGCTTTATGCGAACGAAGCA GGGACCTTGAATGGACAAGATAAGTTGGATGAATTAGGCGCCCCTGCTATTTTTAATGCCTCAATACTCGATTTATTAAC GGATTTGACAGGTGATCGCGGCGCCAAATCCATCTTAAAACAACTGGCAAATGTGGGTGAGCTCGTGGCTGTTCCCTTAC CCCATGCCGCGATTGATATTGATACTAAAGCCGATCTTGCGTTGTGGTTGGCACTTAAGGAGTGA
Upstream 100 bases:
>100_bases GCGGCGAGTTACCCTGCGCTGTGGCATTGAGCATTTTAGCCCAATGCCATGGGGTGCTACACGGCGCGCCATGTTCGACC CTCGATGGGATCATGCCTTA
Downstream 100 bases:
>100_bases GTTATGGCAATACCATCCTCGGAGGCGGCAAAGGACCAGAGTCTTGCGATGCCTTCCCAAAACCTGACCATTAACGGCAG ATCTTTTACCTTAAATGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MLSRQRLLIVVLAAGESRRFQGIKLAQPLSTSSNANSGQSILQHHIDRLARFTSAPLVIGASNQVSVSLLVVLGAHANEL RPQLEALGANQFTLLHNADWQTGLSSSLRVAADYAKAQQFDGMLLTLADQVALTFEDYRQLIETWQMSQQSVAALYANEA GTLNGQDKLDELGAPAIFNASILDLLTDLTGDRGAKSILKQLANVGELVAVPLPHAAIDIDTKADLALWLALKE
Sequences:
>Translated_234_residues MLSRQRLLIVVLAAGESRRFQGIKLAQPLSTSSNANSGQSILQHHIDRLARFTSAPLVIGASNQVSVSLLVVLGAHANEL RPQLEALGANQFTLLHNADWQTGLSSSLRVAADYAKAQQFDGMLLTLADQVALTFEDYRQLIETWQMSQQSVAALYANEA GTLNGQDKLDELGAPAIFNASILDLLTDLTGDRGAKSILKQLANVGELVAVPLPHAAIDIDTKADLALWLALKE >Mature_234_residues MLSRQRLLIVVLAAGESRRFQGIKLAQPLSTSSNANSGQSILQHHIDRLARFTSAPLVIGASNQVSVSLLVVLGAHANEL RPQLEALGANQFTLLHNADWQTGLSSSLRVAADYAKAQQFDGMLLTLADQVALTFEDYRQLIETWQMSQQSVAALYANEA GTLNGQDKLDELGAPAIFNASILDLLTDLTGDRGAKSILKQLANVGELVAVPLPHAAIDIDTKADLALWLALKE
Specific function: Unknown
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25175; Mature: 25175
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRQRLLIVVLAAGESRRFQGIKLAQPLSTSSNANSGQSILQHHIDRLARFTSAPLVIG CCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE ASNQVSVSLLVVLGAHANELRPQLEALGANQFTLLHNADWQTGLSSSLRVAADYAKAQQF CCCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH DGMLLTLADQVALTFEDYRQLIETWQMSQQSVAALYANEAGTLNGQDKLDELGAPAIFNA CCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEHH SILDLLTDLTGDRGAKSILKQLANVGELVAVPLPHAAIDIDTKADLALWLALKE HHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCEEECCCCCCEEEEEEECC >Mature Secondary Structure MLSRQRLLIVVLAAGESRRFQGIKLAQPLSTSSNANSGQSILQHHIDRLARFTSAPLVIG CCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE ASNQVSVSLLVVLGAHANELRPQLEALGANQFTLLHNADWQTGLSSSLRVAADYAKAQQF CCCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH DGMLLTLADQVALTFEDYRQLIETWQMSQQSVAALYANEAGTLNGQDKLDELGAPAIFNA CCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEHH SILDLLTDLTGDRGAKSILKQLANVGELVAVPLPHAAIDIDTKADLALWLALKE HHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA