Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is iorA [H]
Identifier: 117919944
GI number: 117919944
Start: 1743129
End: 1743626
Strand: Direct
Name: iorA [H]
Synonym: Shewana3_1496
Alternate gene names: 117919944
Gene position: 1743129-1743626 (Clockwise)
Preceding gene: 117919943
Following gene: 117919945
Centisome position: 35.06
GC content: 52.41
Gene sequence:
>498_bases ATGGCAATACCATCCTCGGAGGCGGCAAAGGACCAGAGTCTTGCGATGCCTTCCCAAAACCTGACCATTAACGGCAGATC TTTTACCTTAAATGCGGATCCGAATATGCCTATCCTCTGGGCGTTACGGGATATTTTAGGCTTAACGGGCACTAAATATG GCTGCGGCGCCGGGCTCTGCGGCGCGTGTACTGTGCATTTAGATGGTCAACCTGTGCGCGCCTGTTTAACCAGCGTATCC CAGGCGCAAGGCAAACAACTGACCACGATTGAAGGGCTGGATAATCAAAAGCTTAAAAATGCTTGGGCCGAACACAATGT GCCCCAGTGTGGTTATTGTCAGGCCGGGCAATTAATGTCGGCTGCGGCCTTAGTCACTCAGCATCCAAAACCATCGGCGG AGCAAATCGATGCTGCCATGTCGGGTAATTTGTGTCGCTGCGGTACCTATCCTCGGATAAAAGCGGCGCTGCAAAGCTAT GCCAAACAGGAGGGCTAA
Upstream 100 bases:
>100_bases AAATGTGGGTGAGCTCGTGGCTGTTCCCTTACCCCATGCCGCGATTGATATTGATACTAAAGCCGATCTTGCGTTGTGGT TGGCACTTAAGGAGTGAGTT
Downstream 100 bases:
>100_bases GATGAGTACATTCACCGCAGTTGAAAATATCAGTCGCCGCGATGTGTTAAAACTCTTCGGCGCAGTCGGGGGCGGCCTCG CCCTGGGGGCGAGTGGCCTC
Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MAIPSSEAAKDQSLAMPSQNLTINGRSFTLNADPNMPILWALRDILGLTGTKYGCGAGLCGACTVHLDGQPVRACLTSVS QAQGKQLTTIEGLDNQKLKNAWAEHNVPQCGYCQAGQLMSAAALVTQHPKPSAEQIDAAMSGNLCRCGTYPRIKAALQSY AKQEG
Sequences:
>Translated_165_residues MAIPSSEAAKDQSLAMPSQNLTINGRSFTLNADPNMPILWALRDILGLTGTKYGCGAGLCGACTVHLDGQPVRACLTSVS QAQGKQLTTIEGLDNQKLKNAWAEHNVPQCGYCQAGQLMSAAALVTQHPKPSAEQIDAAMSGNLCRCGTYPRIKAALQSY AKQEG >Mature_164_residues AIPSSEAAKDQSLAMPSQNLTINGRSFTLNADPNMPILWALRDILGLTGTKYGCGAGLCGACTVHLDGQPVRACLTSVSQ AQGKQLTTIEGLDNQKLKNAWAEHNVPQCGYCQAGQLMSAAALVTQHPKPSAEQIDAAMSGNLCRCGTYPRIKAALQSYA KQEG
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=156, Percent_Identity=37.1794871794872, Blast_Score=77, Evalue=6e-15, Organism=Homo sapiens, GI71773480, Length=161, Percent_Identity=36.6459627329193, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1786480, Length=162, Percent_Identity=39.5061728395062, Blast_Score=114, Evalue=3e-27, Organism=Escherichia coli, GI1789232, Length=138, Percent_Identity=38.4057971014493, Blast_Score=91, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17539860, Length=155, Percent_Identity=37.4193548387097, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI32566215, Length=160, Percent_Identity=36.875, Blast_Score=104, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17540638, Length=157, Percent_Identity=36.3057324840764, Blast_Score=99, Evalue=7e-22, Organism=Drosophila melanogaster, GI17737937, Length=157, Percent_Identity=36.9426751592357, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI24647193, Length=162, Percent_Identity=34.5679012345679, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI24647201, Length=157, Percent_Identity=32.484076433121, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24647195, Length=163, Percent_Identity=33.1288343558282, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI24647197, Length=163, Percent_Identity=33.1288343558282, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24647199, Length=157, Percent_Identity=31.8471337579618, Blast_Score=77, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 17406; Mature: 17275
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPSSEAAKDQSLAMPSQNLTINGRSFTLNADPNMPILWALRDILGLTGTKYGCGAGLC CCCCCCCCCCCHHHCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCC GACTVHLDGQPVRACLTSVSQAQGKQLTTIEGLDNQKLKNAWAEHNVPQCGYCQAGQLMS CEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHH AAALVTQHPKPSAEQIDAAMSGNLCRCGTYPRIKAALQSYAKQEG HHHHHHCCCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure AIPSSEAAKDQSLAMPSQNLTINGRSFTLNADPNMPILWALRDILGLTGTKYGCGAGLC CCCCCCCCCCHHHCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCC GACTVHLDGQPVRACLTSVSQAQGKQLTTIEGLDNQKLKNAWAEHNVPQCGYCQAGQLMS CEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHH AAALVTQHPKPSAEQIDAAMSGNLCRCGTYPRIKAALQSYAKQEG HHHHHHCCCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]