Click here to switch to the map view.

The map label for this gene is 117919939

Identifier: 117919939

GI number: 117919939

Start: 1738464

End: 1738847

Strand: Direct

Name: 117919939

Synonym: Shewana3_1491

Alternate gene names: NA

Gene position: 1738464-1738847 (Clockwise)

Preceding gene: 117919938

Following gene: 117919941

Centisome position: 34.96

GC content: 47.4

Gene sequence:

>384_bases
ATGTTAAAACCCGTATTTATTCTATTACTCGGTGTCGTGCTGGCAACGCCTATGGCCGCTAATGCATTGAATATCAAGGA
TTACCATAAAGAGGTGATGACAGGAGCCGATGGTAAAGTCGATTGCGCGGCATGCCACGGTGATGCAAAACGTAAAACCG
TTCCCGATGCAGCGAGTTGCAGTAGTTGCCATGGTTCACCTGAGGAGGTGGCTAAGCTGACTGAGCGTCCAGCCGATGCG
GGCCATTCGGTTGAGCCTAATCCTCATGACAGTCTGCACTACGGCACTGATCTGCCATGTACTTACTGCCATCAGGAACA
CAAAGAAAGTAAAGTCTATTGCAATCAATGCCATGAATTTACTTATCCTCAGATGAAACGTTAA

Upstream 100 bases:

>100_bases
AGGACCGTCCGTTTACCCCCGATATCCAAGCGTCAACTGACTTTATTGCAAACTATTAATCTACGATGCGGGGCGCGATG
CCCCGCCTAGGAAGACTCTG

Downstream 100 bases:

>100_bases
TTTCATCTCGATTAGAAACTCGCTCCCCTGCTTTTTTTGACTATCTTTGTCATGCACTCAACCCGGTTGAGTGCATTTTT
TTAGGCAAAAAAAAGAGTAA

Product: tetraheme cytochrome c

Products: NA

Alternate protein names: Fumarate Reductase Flavoprotein Subunit; Cytochrome C

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MLKPVFILLLGVVLATPMAANALNIKDYHKEVMTGADGKVDCAACHGDAKRKTVPDAASCSSCHGSPEEVAKLTERPADA
GHSVEPNPHDSLHYGTDLPCTYCHQEHKESKVYCNQCHEFTYPQMKR

Sequences:

>Translated_127_residues
MLKPVFILLLGVVLATPMAANALNIKDYHKEVMTGADGKVDCAACHGDAKRKTVPDAASCSSCHGSPEEVAKLTERPADA
GHSVEPNPHDSLHYGTDLPCTYCHQEHKESKVYCNQCHEFTYPQMKR
>Mature_127_residues
MLKPVFILLLGVVLATPMAANALNIKDYHKEVMTGADGKVDCAACHGDAKRKTVPDAASCSSCHGSPEEVAKLTERPADA
GHSVEPNPHDSLHYGTDLPCTYCHQEHKESKVYCNQCHEFTYPQMKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13909; Mature: 13909

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPVFILLLGVVLATPMAANALNIKDYHKEVMTGADGKVDCAACHGDAKRKTVPDAASC
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
SSCHGSPEEVAKLTERPADAGHSVEPNPHDSLHYGTDLPCTYCHQEHKESKVYCNQCHEF
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
TYPQMKR
CCCCCCC
>Mature Secondary Structure
MLKPVFILLLGVVLATPMAANALNIKDYHKEVMTGADGKVDCAACHGDAKRKTVPDAASC
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
SSCHGSPEEVAKLTERPADAGHSVEPNPHDSLHYGTDLPCTYCHQEHKESKVYCNQCHEF
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
TYPQMKR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA