Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_008577 |
Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is cheB1 [H]
Identifier: 117919811
GI number: 117919811
Start: 1576442
End: 1577566
Strand: Direct
Name: cheB1 [H]
Synonym: Shewana3_1363
Alternate gene names: 117919811
Gene position: 1576442-1577566 (Clockwise)
Preceding gene: 117919810
Following gene: 117919812
Centisome position: 31.71
GC content: 52.0
Gene sequence:
>1125_bases ATGGCCATTAAAGTATTAGTCGTTGATGACTCAAGTTTTTTTAGACGACGTGTTAGTGAAATAGTCAATCAAGATCCTGA ACTGGAAGTGATCGCGACGGCCTCTAACGGGGCCGAAGCGGTGAAGATGGCTGCCGAGCTAAATCCTCAAGTCATTACAA TGGATATTGAAATGCCTGTCATGGACGGTATTACGGCCGTGCGTGAGATCATGGCGAAATGTCCAACACCAATTTTGATG TTTTCTTCATTGACCCACGATGGCGCCAAAGCCACGCTAGATGCCCTCGATGCGGGGGCGCTCGATTTCTTACCTAAGCG CTTTGAAGATATTGCGACCAATAAAGACGAAGCAATTCTATTATTGCAGCAAAGGGTTAAAGCCTTAGGTCGTCGCCGGA TTTTCCGCCCGACGGTGCGTCCAACGGCGCCTACGCCGCCACCTCGCCAGAGTGCGAGTACCGTATTAGGCGGCGCTGCT ACCCATGCGCAACCTGCGCCAGCGCCTGTGCGTTCTTCACCTGCAACCTCGATTCGTCCAAGTGGTAAGCAATATAAATT ATTGCTGATTGGCACATCGACTGGCGGGCCTGTCGCCTTGCAGAAGATTTTGACTCAGTTCCCAGCAAATTATCCTCATC CTATTTTGCTTATCCAGCATATGCCTGCGGCTTTCACCCCCGCTTTTGCGAACCGTTTAAACGGTTTGTGTAAGATTGAA GTGAAAGAAGCGGCTAATGGTGATGTATTGCGTCCAGGTTGCGCTTATCTTGCGCCAGGTGGAATGCAAATGATGGTTGA GCGCGCTGGTGTTACTGGCCGTGTTAAAGTCTTGGCGGGTAGCGCTGAGATGAATTACAAACCCTGCGTCGACATTACCT TTGCCTCAGCATCTAAAGCCTATGGCGGGGATGTGCTGGCGGTCGTGCTGACGGGCATGGGAGCTGACGGCCGCGAAGGT GCGCGTATGCTGAAATCGGTGGGCGCGACTATTTGGGCTCAGGATGAGGCCAGCTGCGTGGTTTATGGTATGCCGCAGGC GGTGGCCAGTGCGGGTATCGCCACTCAGTCAATTTCTCTGGATAACATGGCGGAGTCGATTTTAAAAGAGTCTGCGCGTG GCTAA
Upstream 100 bases:
>100_bases GACAATCACATCCGACGGTGGCATCGCCCTCATCTTGGATGTCCCAGGGTTATTAAAGCATTATGCGAAAAATAAAAGTT AGTTTCCAATAAGGAATGGA
Downstream 100 bases:
>100_bases GTCGAAAACACCGATAAGCACAAATATTGTGCTTATCATAGTGTTAATGGCGATCGCTATATTGTGCCTCGGCGCGTTAA GTCTCGACTATCATCGAAAA
Product: chemotaxis-specific methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MAIKVLVVDDSSFFRRRVSEIVNQDPELEVIATASNGAEAVKMAAELNPQVITMDIEMPVMDGITAVREIMAKCPTPILM FSSLTHDGAKATLDALDAGALDFLPKRFEDIATNKDEAILLLQQRVKALGRRRIFRPTVRPTAPTPPPRQSASTVLGGAA THAQPAPAPVRSSPATSIRPSGKQYKLLLIGTSTGGPVALQKILTQFPANYPHPILLIQHMPAAFTPAFANRLNGLCKIE VKEAANGDVLRPGCAYLAPGGMQMMVERAGVTGRVKVLAGSAEMNYKPCVDITFASASKAYGGDVLAVVLTGMGADGREG ARMLKSVGATIWAQDEASCVVYGMPQAVASAGIATQSISLDNMAESILKESARG
Sequences:
>Translated_374_residues MAIKVLVVDDSSFFRRRVSEIVNQDPELEVIATASNGAEAVKMAAELNPQVITMDIEMPVMDGITAVREIMAKCPTPILM FSSLTHDGAKATLDALDAGALDFLPKRFEDIATNKDEAILLLQQRVKALGRRRIFRPTVRPTAPTPPPRQSASTVLGGAA THAQPAPAPVRSSPATSIRPSGKQYKLLLIGTSTGGPVALQKILTQFPANYPHPILLIQHMPAAFTPAFANRLNGLCKIE VKEAANGDVLRPGCAYLAPGGMQMMVERAGVTGRVKVLAGSAEMNYKPCVDITFASASKAYGGDVLAVVLTGMGADGREG ARMLKSVGATIWAQDEASCVVYGMPQAVASAGIATQSISLDNMAESILKESARG >Mature_373_residues AIKVLVVDDSSFFRRRVSEIVNQDPELEVIATASNGAEAVKMAAELNPQVITMDIEMPVMDGITAVREIMAKCPTPILMF SSLTHDGAKATLDALDAGALDFLPKRFEDIATNKDEAILLLQQRVKALGRRRIFRPTVRPTAPTPPPRQSASTVLGGAAT HAQPAPAPVRSSPATSIRPSGKQYKLLLIGTSTGGPVALQKILTQFPANYPHPILLIQHMPAAFTPAFANRLNGLCKIEV KEAANGDVLRPGCAYLAPGGMQMMVERAGVTGRVKVLAGSAEMNYKPCVDITFASASKAYGGDVLAVVLTGMGADGREGA RMLKSVGATIWAQDEASCVVYGMPQAVASAGIATQSISLDNMAESILKESARG
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=372, Percent_Identity=36.8279569892473, Blast_Score=229, Evalue=3e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 39507; Mature: 39376
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKVLVVDDSSFFRRRVSEIVNQDPELEVIATASNGAEAVKMAAELNPQVITMDIEMPV CEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCH MDGITAVREIMAKCPTPILMFSSLTHDGAKATLDALDAGALDFLPKRFEDIATNKDEAIL HHHHHHHHHHHHHCCCCEEEHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH LLQQRVKALGRRRIFRPTVRPTAPTPPPRQSASTVLGGAATHAQPAPAPVRSSPATSIRP HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC SGKQYKLLLIGTSTGGPVALQKILTQFPANYPHPILLIQHMPAAFTPAFANRLNGLCKIE CCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHCCCEEEEE VKEAANGDVLRPGCAYLAPGGMQMMVERAGVTGRVKVLAGSAEMNYKPCVDITFASASKA EECCCCCCEECCCCCEECCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEECCCCCC YGGDVLAVVLTGMGADGREGARMLKSVGATIWAQDEASCVVYGMPQAVASAGIATQSISL CCCCEEEEEHCCCCCCCHHHHHHHHHHCCEEEECCCCCEEEEECHHHHHHCCCCEEECCH DNMAESILKESARG HHHHHHHHHHHCCC >Mature Secondary Structure AIKVLVVDDSSFFRRRVSEIVNQDPELEVIATASNGAEAVKMAAELNPQVITMDIEMPV EEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCH MDGITAVREIMAKCPTPILMFSSLTHDGAKATLDALDAGALDFLPKRFEDIATNKDEAIL HHHHHHHHHHHHHCCCCEEEHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH LLQQRVKALGRRRIFRPTVRPTAPTPPPRQSASTVLGGAATHAQPAPAPVRSSPATSIRP HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC SGKQYKLLLIGTSTGGPVALQKILTQFPANYPHPILLIQHMPAAFTPAFANRLNGLCKIE CCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHCCCEEEEE VKEAANGDVLRPGCAYLAPGGMQMMVERAGVTGRVKVLAGSAEMNYKPCVDITFASASKA EECCCCCCEECCCCCEECCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEECCCCCC YGGDVLAVVLTGMGADGREGARMLKSVGATIWAQDEASCVVYGMPQAVASAGIATQSISL CCCCEEEEEHCCCCCCCHHHHHHHHHHCCEEEECCCCCEEEEECHHHHHHCCCCEEECCH DNMAESILKESARG HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]