Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117919812

Identifier: 117919812

GI number: 117919812

Start: 1577559

End: 1578095

Strand: Direct

Name: 117919812

Synonym: Shewana3_1364

Alternate gene names: NA

Gene position: 1577559-1578095 (Clockwise)

Preceding gene: 117919811

Following gene: 117919813

Centisome position: 31.73

GC content: 51.02

Gene sequence:

>537_bases
GTGGCTAAGTCGAAAACACCGATAAGCACAAATATTGTGCTTATCATAGTGTTAATGGCGATCGCTATATTGTGCCTCGG
CGCGTTAAGTCTCGACTATCATCGAAAAATCACTGCATTACGCGATGATGTAAAGCGATTGGAGTCGACACAGATTTTGC
TCATGGTGCCGGATGAACAGGCACAGGCGATTGCGTCTTGGCTCGCTTCCCATCCGGATCAAACCAAAGCAATGTTAAAG
TTGGCTTCACCGGGAGAGCAAAAGGCGGTGACGCTGGGCCCTGAGGCGTTCTCGGCATCCGATGCAAAAATTCCGCCGAC
GCTTGAGAAACCGGTAGAGGATAAACCGTCGCAGCAGCAAACTGCTGTCGATCCCGTGCCTGAGTCTCTGCGTACAGAAG
CTTCATCGGCTGCTGCTACGGAAGCACAACCTCAGTCGAGTAATGTTCCCGTGGTGATTTCAGAAAATGCCGATGGGGTC
AAAGTCATTAGTTTGCCTAACGGCGGCATAAGAGTGACCACAAGGGAAGGCGAGTAG

Upstream 100 bases:

>100_bases
GTGGTTTATGGTATGCCGCAGGCGGTGGCCAGTGCGGGTATCGCCACTCAGTCAATTTCTCTGGATAACATGGCGGAGTC
GATTTTAAAAGAGTCTGCGC

Downstream 100 bases:

>100_bases
TGCTTGTCGTTGCTCAAACGGGCATGATAAATAGCCGAGAATCAACATTAAAGAGGTCAGTTCTTTGAAAGTCTGGACCA
TTGCGAATCAAAAAGGTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MAKSKTPISTNIVLIIVLMAIAILCLGALSLDYHRKITALRDDVKRLESTQILLMVPDEQAQAIASWLASHPDQTKAMLK
LASPGEQKAVTLGPEAFSASDAKIPPTLEKPVEDKPSQQQTAVDPVPESLRTEASSAAATEAQPQSSNVPVVISENADGV
KVISLPNGGIRVTTREGE

Sequences:

>Translated_178_residues
MAKSKTPISTNIVLIIVLMAIAILCLGALSLDYHRKITALRDDVKRLESTQILLMVPDEQAQAIASWLASHPDQTKAMLK
LASPGEQKAVTLGPEAFSASDAKIPPTLEKPVEDKPSQQQTAVDPVPESLRTEASSAAATEAQPQSSNVPVVISENADGV
KVISLPNGGIRVTTREGE
>Mature_177_residues
AKSKTPISTNIVLIIVLMAIAILCLGALSLDYHRKITALRDDVKRLESTQILLMVPDEQAQAIASWLASHPDQTKAMLKL
ASPGEQKAVTLGPEAFSASDAKIPPTLEKPVEDKPSQQQTAVDPVPESLRTEASSAAATEAQPQSSNVPVVISENADGVK
VISLPNGGIRVTTREGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18886; Mature: 18755

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSKTPISTNIVLIIVLMAIAILCLGALSLDYHRKITALRDDVKRLESTQILLMVPDEQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHH
AQAIASWLASHPDQTKAMLKLASPGEQKAVTLGPEAFSASDAKIPPTLEKPVEDKPSQQQ
HHHHHHHHHCCCCHHHHHEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
TAVDPVPESLRTEASSAAATEAQPQSSNVPVVISENADGVKVISLPNGGIRVTTREGE
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEECCCC
>Mature Secondary Structure 
AKSKTPISTNIVLIIVLMAIAILCLGALSLDYHRKITALRDDVKRLESTQILLMVPDEQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHH
AQAIASWLASHPDQTKAMLKLASPGEQKAVTLGPEAFSASDAKIPPTLEKPVEDKPSQQQ
HHHHHHHHHCCCCHHHHHEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
TAVDPVPESLRTEASSAAATEAQPQSSNVPVVISENADGVKVISLPNGGIRVTTREGE
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA