Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is ylxH [H]
Identifier: 117919806
GI number: 117919806
Start: 1571350
End: 1572231
Strand: Direct
Name: ylxH [H]
Synonym: Shewana3_1358
Alternate gene names: 117919806
Gene position: 1571350-1572231 (Clockwise)
Preceding gene: 117919805
Following gene: 117919807
Centisome position: 31.6
GC content: 47.62
Gene sequence:
>882_bases ATGACCCTGGATCAAGCAAGTGGTTTACGTATGATGAATCAACCCTATAACGAAAAAGTGAAAGTAATCGCGGTTACGGG TGGTAAAGGTGGCGTGGGTAAAACCAGCGTGTCTATCAATACCGCAGTAGCATTAGCCGAAAAGGGCAAGCGTGTCTTAG TGCTTGATGCCGACTTAGGCTTAGCAAACGTCGATGTCATGTTAGGGATCCGTGCTGAACGTAACCTTTCCCACGTACTC TCTGGCGATGCTGAGCTGGATGATATTATCGTCCGAGGACCTAAGGGCATAGGCATTGTCCCTGCGACCTCAGGAACTCA AGGCATGGTAGAGTTGAGCCCTGCGCAACATGCGGGCTTAATTCGTGCTTTTAGTGAGATGCGTACCCAGTTTGATATCC TCATCGTGGATACTGCCGCGGGGATTTCTGACATGGTACTCAGTTTCTCCCGTGCCTCACAGGATGTGTTGGTGGTTGTT TGTGACGAGCCAACTTCTATCACTGACGCCTATGCGTTAATCAAAATTCTCAGCCGTGAACACGGCGTTTTCCGCTTTAA AATTGTTGCTAATATGGTGCGCAGTTTGCGCGAAGGTATGGAATTGTTTGCTAAACTCAGTAAAGTGACCGACAGATTCT TGGACGTGGCACTCGAACTGGTTGCGACCATTCCGTTTGATGAAAACCTTCGCAAATCAGTGCGTAAACAAAAGTTAGTG GTTGAGGCTTATCCTAAGTCTCCTGCTGCGATTGCGTACCATGGCTTAGCGAATAAAATCATGAGCTGGCCAGTACCACA GCAACCTGGTGGGCATTTGGAGTTTTTCGTTGAGCGTTTAGTTCAGCGACCAGATTTTCAAGAGGAAAAAACGAGTGAAT AA
Upstream 100 bases:
>100_bases CTCGCAGAGCAGGCGTTAGCGGCCTTAGAAAACACTGAACAACAATCGTTACCAGACACAGCGTGGTCAGATAATATGAC CTGTGCATTTGAGTAGAGTT
Downstream 100 bases:
>100_bases AGCCGCAGCGTATACTTGTTTAGACAGTAAAACGTCAATCGTTGAACAGTATGCACCGTTGGTTAAAAGAATTGCACATC ACTTGCTCGCCAGATTACCT
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGIRAERNLSHVL SGDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGLIRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQDVLVVV CDEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLV VEAYPKSPAAIAYHGLANKIMSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE
Sequences:
>Translated_293_residues MTLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGIRAERNLSHVL SGDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGLIRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQDVLVVV CDEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLV VEAYPKSPAAIAYHGLANKIMSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE >Mature_292_residues TLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGIRAERNLSHVLS GDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGLIRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQDVLVVVC DEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLVV EAYPKSPAAIAYHGLANKIMSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787423, Length=163, Percent_Identity=30.6748466257669, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI87082045, Length=267, Percent_Identity=25.8426966292135, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 31900; Mature: 31769
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLG CCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCC LANVDVMLGIRAERNLSHVLSGDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGL EECEEEEEEECCCCCHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCCEEEECCHHHHHH IRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQDVLVVVCDEPTSITDAYALIKILSRE HHHHHHHCCEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCC HGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLV CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEE VEAYPKSPAAIAYHGLANKIMSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE EEECCCCCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLG CCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCC LANVDVMLGIRAERNLSHVLSGDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGL EECEEEEEEECCCCCHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCCEEEECCHHHHHH IRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQDVLVVVCDEPTSITDAYALIKILSRE HHHHHHHCCEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCC HGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLV CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEE VEAYPKSPAAIAYHGLANKIMSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE EEECCCCCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]