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The map label for this gene is yjjK [C]

Identifier: 117919542

GI number: 117919542

Start: 1286560

End: 1288227

Strand: Reverse

Name: yjjK [C]

Synonym: Shewana3_1093

Alternate gene names: 117919542

Gene position: 1288227-1286560 (Counterclockwise)

Preceding gene: 117919552

Following gene: 117919539

Centisome position: 25.91

GC content: 52.64

Gene sequence:

>1668_bases
ATGGCTCAGTTTGTTTACAGCATGCTGCGGGTGGGCAAGGTTGTTCCTCCTAAGAAGCAGATCCTTAAAGACATTTCCTT
AAGCTTTTTCCCCGGCGCTAAGATCGGTGTGTTAGGTCTTAACGGTTCAGGTAAATCCACCCTACTGCGCATCATGGCCG
GTATCGATACCGAGATTGAGGGTGAAGCGCGCCCAATGCCAGGGCTGAAGATTGGTTATCTGCCGCAAGAACCGAAACTC
GATCCGACGCAAACCGTGCGTGAAGCGATTGAAGAAGCGGTTTCTGAAGCCAAAAATGCCCTCAAACGCTTAGACGAAGT
CTATGCGGCTTACGCCGATCCCGATGCGGACTTCGACGCACTAGCCAAAGAGCAAGGTGAACTCGAAGCTATCATTCAGG
CGCAGGACGCCCACAATCTGGACAACATCCTCGAGCGTGCGGCGAATGCCCTGCGTCTACCTGATTGGGATGAGAAGATT
GAAGTATTATCGGGTGGTGAGCGTCGCCGTGTGGCGATTTGTCGTCTGCTGCTGGAAAAACCAGAGATGCTGCTACTCGA
CGAACCCACCAACCACTTGGACGCCGAATCAGTCGCTTGGCTCGAGCACTTCCTGCAGGAATACTCGGGCACTGTTGTGG
CGATTACCCACGACCGTTACTTCCTCGACAATGCTGCAGGCTGGATTTTAGAACTTGACCGTGGTGAGGGTATCCCATGG
GAAGGCAACTACTCTTCATGGCTTGAGCAAAAAGATGCTCGCTTGAAGCAGGAATCTGCCGCAGAAAGCGCGCGTCAAAA
GACCATTGCGAAAGAATTAGAATGGGTTCGCCAAGGCGCGAAAGGCCGTCAGTCTAAGGGCAAAGCCCGTATGGCGCGCT
TCGAAGAGCTGAACACCACTGATTACCAAAAACGTAACGAAACCAACGAGCTGTTTATTCCGCCCGGACCGCGTTTAGGT
GACAAAGTGATTGAGGTTAACAACTTAACCAAATCCTACGGTGACCGCGTTCTGATCGATAACCTGTCGTTCTCCATTCC
TAAGGGCGCGATCGTCGGTATTATCGGTGCCAACGGTGCAGGTAAATCGACCCTGTTCCGCATGCTGTCTGGCAGCGAGC
AGCCTGATAGCGGCACCATCGAGCTGGGTGAAACCGTGCAACTGGCGTCGGTTGAACAGTTCCGTGACTCGATGAATGAC
AAGAACACCATTTGGCAAGAAATTTCCGGTGGTCAAGACATCATGCGTATCAACAACATGGAAATCCCAAGCCGCGCCTA
TGTAGGCCGCTTCAACTTCCGTGGTGCGGATCAGCAAAAAGTTATCGGCACGCTGTCGGGCGGTGAGCGCAACCGTGTTC
ACTTAGCTAAACTGCTGCAGGCTGGCGGTAACGTACTGCTCCTCGACGAACCTACCAACGACTTAGACGTTGAAACCCTG
CGCGCACTGGAAGAAGCGATTCTCGAATTCCCAGGTTGCGCTATGGTGATCTCGCACGACCGTTGGTTCTTAGACCGTAT
CGCGACCCATATTCTGGACTACCGCGACGAAGGCCAAGTGAACTTCTACGAAGGTAACTACACCGAATACTCGGCGTGGT
TGAAGAACACCTATGGTGCCGATGTGGTTGAGCCACACCGCTTAAAATACAAGCGTATGACTAAGTAA

Upstream 100 bases:

>100_bases
TCCTACAGTTTTACCTTGAACTCGCCTCAATGCCGAGTTGAGTTCGGCGCGCAATCGAGTAGAATTAGCCGCATCATTAG
TCACTTATAGATGCAGAAAA

Downstream 100 bases:

>100_bases
GCGCGATGCGTTTACAGGTACAAATAAGCCCCGCAATTGCGGGGCTTTTCTTTGATACACAAAAGGTTATGCCGACTAAT
CCTGTTCCTGAATCGCTTTC

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 554

Protein sequence:

>555_residues
MAQFVYSMLRVGKVVPPKKQILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGIDTEIEGEARPMPGLKIGYLPQEPKL
DPTQTVREAIEEAVSEAKNALKRLDEVYAAYADPDADFDALAKEQGELEAIIQAQDAHNLDNILERAANALRLPDWDEKI
EVLSGGERRRVAICRLLLEKPEMLLLDEPTNHLDAESVAWLEHFLQEYSGTVVAITHDRYFLDNAAGWILELDRGEGIPW
EGNYSSWLEQKDARLKQESAAESARQKTIAKELEWVRQGAKGRQSKGKARMARFEELNTTDYQKRNETNELFIPPGPRLG
DKVIEVNNLTKSYGDRVLIDNLSFSIPKGAIVGIIGANGAGKSTLFRMLSGSEQPDSGTIELGETVQLASVEQFRDSMND
KNTIWQEISGGQDIMRINNMEIPSRAYVGRFNFRGADQQKVIGTLSGGERNRVHLAKLLQAGGNVLLLDEPTNDLDVETL
RALEEAILEFPGCAMVISHDRWFLDRIATHILDYRDEGQVNFYEGNYTEYSAWLKNTYGADVVEPHRLKYKRMTK

Sequences:

>Translated_555_residues
MAQFVYSMLRVGKVVPPKKQILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGIDTEIEGEARPMPGLKIGYLPQEPKL
DPTQTVREAIEEAVSEAKNALKRLDEVYAAYADPDADFDALAKEQGELEAIIQAQDAHNLDNILERAANALRLPDWDEKI
EVLSGGERRRVAICRLLLEKPEMLLLDEPTNHLDAESVAWLEHFLQEYSGTVVAITHDRYFLDNAAGWILELDRGEGIPW
EGNYSSWLEQKDARLKQESAAESARQKTIAKELEWVRQGAKGRQSKGKARMARFEELNTTDYQKRNETNELFIPPGPRLG
DKVIEVNNLTKSYGDRVLIDNLSFSIPKGAIVGIIGANGAGKSTLFRMLSGSEQPDSGTIELGETVQLASVEQFRDSMND
KNTIWQEISGGQDIMRINNMEIPSRAYVGRFNFRGADQQKVIGTLSGGERNRVHLAKLLQAGGNVLLLDEPTNDLDVETL
RALEEAILEFPGCAMVISHDRWFLDRIATHILDYRDEGQVNFYEGNYTEYSAWLKNTYGADVVEPHRLKYKRMTK
>Mature_554_residues
AQFVYSMLRVGKVVPPKKQILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGIDTEIEGEARPMPGLKIGYLPQEPKLD
PTQTVREAIEEAVSEAKNALKRLDEVYAAYADPDADFDALAKEQGELEAIIQAQDAHNLDNILERAANALRLPDWDEKIE
VLSGGERRRVAICRLLLEKPEMLLLDEPTNHLDAESVAWLEHFLQEYSGTVVAITHDRYFLDNAAGWILELDRGEGIPWE
GNYSSWLEQKDARLKQESAAESARQKTIAKELEWVRQGAKGRQSKGKARMARFEELNTTDYQKRNETNELFIPPGPRLGD
KVIEVNNLTKSYGDRVLIDNLSFSIPKGAIVGIIGANGAGKSTLFRMLSGSEQPDSGTIELGETVQLASVEQFRDSMNDK
NTIWQEISGGQDIMRINNMEIPSRAYVGRFNFRGADQQKVIGTLSGGERNRVHLAKLLQAGGNVLLLDEPTNDLDVETLR
ALEEAILEFPGCAMVISHDRWFLDRIATHILDYRDEGQVNFYEGNYTEYSAWLKNTYGADVVEPHRLKYKRMTK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=531, Percent_Identity=28.2485875706215, Blast_Score=182, Evalue=1e-45,
Organism=Homo sapiens, GI10947137, Length=540, Percent_Identity=27.962962962963, Blast_Score=175, Evalue=9e-44,
Organism=Homo sapiens, GI27881506, Length=515, Percent_Identity=28.5436893203883, Blast_Score=175, Evalue=9e-44,
Organism=Homo sapiens, GI10947135, Length=530, Percent_Identity=27.9245283018868, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI69354671, Length=530, Percent_Identity=27.9245283018868, Blast_Score=149, Evalue=8e-36,
Organism=Homo sapiens, GI31657092, Length=202, Percent_Identity=29.2079207920792, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI27881501, Length=191, Percent_Identity=25.6544502617801, Blast_Score=73, Evalue=8e-13,
Organism=Homo sapiens, GI30795238, Length=191, Percent_Identity=25.6544502617801, Blast_Score=73, Evalue=9e-13,
Organism=Homo sapiens, GI7262393, Length=227, Percent_Identity=24.6696035242291, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI156105685, Length=249, Percent_Identity=28.5140562248996, Blast_Score=67, Evalue=6e-11,
Organism=Escherichia coli, GI2367384, Length=555, Percent_Identity=80.9009009009009, Blast_Score=943, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=516, Percent_Identity=32.7519379844961, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI1789751, Length=546, Percent_Identity=32.0512820512821, Blast_Score=238, Evalue=9e-64,
Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=30.1318267419962, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI48994943, Length=475, Percent_Identity=24.8421052631579, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI87081782, Length=565, Percent_Identity=24.070796460177, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI87081791, Length=235, Percent_Identity=37.0212765957447, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI87081709, Length=193, Percent_Identity=29.0155440414508, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788506, Length=550, Percent_Identity=24, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1788897, Length=212, Percent_Identity=31.6037735849057, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1786345, Length=180, Percent_Identity=30, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788225, Length=221, Percent_Identity=25.7918552036199, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786975, Length=397, Percent_Identity=24.1813602015113, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1787164, Length=190, Percent_Identity=27.8947368421053, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI87081834, Length=217, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1786398, Length=211, Percent_Identity=27.9620853080569, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1787029, Length=224, Percent_Identity=26.7857142857143, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788165, Length=188, Percent_Identity=30.3191489361702, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789891, Length=227, Percent_Identity=24.2290748898678, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788472, Length=226, Percent_Identity=26.5486725663717, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1788450, Length=220, Percent_Identity=28.1818181818182, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786563, Length=190, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787105, Length=208, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786698, Length=193, Percent_Identity=29.0155440414508, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1787089, Length=218, Percent_Identity=24.7706422018349, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788644, Length=232, Percent_Identity=26.2931034482759, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1789586, Length=208, Percent_Identity=25.9615384615385, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1787712, Length=170, Percent_Identity=28.8235294117647, Blast_Score=63, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=558, Percent_Identity=26.3440860215054, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17555318, Length=544, Percent_Identity=26.1029411764706, Blast_Score=178, Evalue=6e-45,
Organism=Caenorhabditis elegans, GI17553372, Length=527, Percent_Identity=29.4117647058824, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17532409, Length=207, Percent_Identity=27.536231884058, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17542146, Length=204, Percent_Identity=24.5098039215686, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17510237, Length=206, Percent_Identity=24.7572815533981, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17569143, Length=232, Percent_Identity=29.7413793103448, Blast_Score=65, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=562, Percent_Identity=28.8256227758007, Blast_Score=190, Evalue=4e-49,
Organism=Saccharomyces cerevisiae, GI6321121, Length=558, Percent_Identity=26.7025089605735, Blast_Score=175, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6323278, Length=384, Percent_Identity=26.0416666666667, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6324314, Length=382, Percent_Identity=25.6544502617801, Blast_Score=104, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6325030, Length=389, Percent_Identity=25.706940874036, Blast_Score=104, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24642252, Length=532, Percent_Identity=29.6992481203008, Blast_Score=198, Evalue=6e-51,
Organism=Drosophila melanogaster, GI18859989, Length=532, Percent_Identity=29.6992481203008, Blast_Score=198, Evalue=6e-51,
Organism=Drosophila melanogaster, GI24666836, Length=512, Percent_Identity=30.2734375, Blast_Score=198, Evalue=9e-51,
Organism=Drosophila melanogaster, GI24641342, Length=532, Percent_Identity=28.9473684210526, Blast_Score=185, Evalue=7e-47,
Organism=Drosophila melanogaster, GI24666092, Length=201, Percent_Identity=28.8557213930348, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24648314, Length=165, Percent_Identity=28.4848484848485, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI281363262, Length=222, Percent_Identity=27.9279279279279, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24653245, Length=222, Percent_Identity=27.9279279279279, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 62180; Mature: 62049

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQFVYSMLRVGKVVPPKKQILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGIDTEIE
CHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
GEARPMPGLKIGYLPQEPKLDPTQTVREAIEEAVSEAKNALKRLDEVYAAYADPDADFDA
CCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LAKEQGELEAIIQAQDAHNLDNILERAANALRLPDWDEKIEVLSGGERRRVAICRLLLEK
HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCC
PEMLLLDEPTNHLDAESVAWLEHFLQEYSGTVVAITHDRYFLDNAAGWILELDRGEGIPW
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCEEEEEECCCCCCC
EGNYSSWLEQKDARLKQESAAESARQKTIAKELEWVRQGAKGRQSKGKARMARFEELNTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC
DYQKRNETNELFIPPGPRLGDKVIEVNNLTKSYGDRVLIDNLSFSIPKGAIVGIIGANGA
HHHHCCCCCEEEECCCCCCCCCEEEHHHHHHHHCCEEEEECCCCCCCCCCEEEEEECCCC
GKSTLFRMLSGSEQPDSGTIELGETVQLASVEQFRDSMNDKNTIWQEISGGQDIMRINNM
CHHHHHHHHCCCCCCCCCCEEECCEEEHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCC
EIPSRAYVGRFNFRGADQQKVIGTLSGGERNRVHLAKLLQAGGNVLLLDEPTNDLDVETL
CCCCHHHEECCCCCCCCHHHEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RALEEAILEFPGCAMVISHDRWFLDRIATHILDYRDEGQVNFYEGNYTEYSAWLKNTYGA
HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCC
DVVEPHRLKYKRMTK
CCCCHHHHHHHHCCC
>Mature Secondary Structure 
AQFVYSMLRVGKVVPPKKQILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGIDTEIE
HHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
GEARPMPGLKIGYLPQEPKLDPTQTVREAIEEAVSEAKNALKRLDEVYAAYADPDADFDA
CCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LAKEQGELEAIIQAQDAHNLDNILERAANALRLPDWDEKIEVLSGGERRRVAICRLLLEK
HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCC
PEMLLLDEPTNHLDAESVAWLEHFLQEYSGTVVAITHDRYFLDNAAGWILELDRGEGIPW
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCEEEEEECCCCCCC
EGNYSSWLEQKDARLKQESAAESARQKTIAKELEWVRQGAKGRQSKGKARMARFEELNTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC
DYQKRNETNELFIPPGPRLGDKVIEVNNLTKSYGDRVLIDNLSFSIPKGAIVGIIGANGA
HHHHCCCCCEEEECCCCCCCCCEEEHHHHHHHHCCEEEEECCCCCCCCCCEEEEEECCCC
GKSTLFRMLSGSEQPDSGTIELGETVQLASVEQFRDSMNDKNTIWQEISGGQDIMRINNM
CHHHHHHHHCCCCCCCCCCEEECCEEEHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCC
EIPSRAYVGRFNFRGADQQKVIGTLSGGERNRVHLAKLLQAGGNVLLLDEPTNDLDVETL
CCCCHHHEECCCCCCCCHHHEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RALEEAILEFPGCAMVISHDRWFLDRIATHILDYRDEGQVNFYEGNYTEYSAWLKNTYGA
HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCC
DVVEPHRLKYKRMTK
CCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]