Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919539
Identifier: 117919539
GI number: 117919539
Start: 1283202
End: 1284101
Strand: Reverse
Name: 117919539
Synonym: Shewana3_1090
Alternate gene names: NA
Gene position: 1284101-1283202 (Counterclockwise)
Preceding gene: 117919542
Following gene: 117919538
Centisome position: 25.83
GC content: 48.0
Gene sequence:
>900_bases ATGACACTATTGAATAACCTCAGCTTAGCCAGCTTCAAACCCCAATTCGCCGCTGCAATGTTGGTGGCAGGAATGGCTAC GGCGCAGGCCGCACCTTTGCAAGTGAGCCATTTTAATCCGGGTGAAAACAGCATCTTTGCCGTGTCCTCCAGCTTTATCA GTGGCGAGCATGAAATGATGTTGGTCGATGCTCAGTTCCAAAAAAATGATGCCCAGACCTTAGTGAATACCATTAAGGCC AGCGGTAAAAAACTCACCTTGGTTTATATCAGCCACAGCGATCCTGACTTTTACTTTGGGTTGGATGTGATTAAGCAAAA CTTTCCCGAGGTAGAAATCGTCGCCACCCAAACCACGGTCGATGATATTAAAGCCTCGATGGAGGGCAAACTCGCCTACT GGGGACCGATTTTAAAGGACAATGCGCCGAGCCAATTAGTGTTGCCAAAGGTGGTGACAACCAATAGCTTTAGTATCGAC GGCGAACAAGTGCTGATTGAAGGTCTAGAGGATGCTCATCCTAAGCATACTTTCCTGTGGGTACCTTCGGCTAAGACCAT CACTGGCGGAGTTGAAGTATTTGATAATACCCATGTTTGGATAGCTGATACCCAAAGTATCGAGTCTCGCCAGGCTTGGT TAGCCCATTTAGATAAAATGAGCGCCCTCTCCCCCGAAACAGTGATCCCTGGCCATTATCTTGGCAAAGCGAGATTTGAT CAGCGCGCGATTAGCTTTACCCGCGACTATATTCATGCCTTTGAAAATGCGGCTAAAACAGCAAAAAATTCTGCGGACTT AATCGCCAAGATGCTCGCACTCTACCCACAAATCCCCAGCGATGTGGGCCTTGAGATCAGCGCCAAAGTGATTATGGGTG AAATGCGCTGGCCCATGTAA
Upstream 100 bases:
>100_bases TTCCGTGTTTATCTAACGTTTTTTGCAACCTAAACTAAGCTCACTTTTGCAGCAGTGCAAATCACCGAATGCCTATTTGA ATGAATAAGTGAGAACTGAA
Downstream 100 bases:
>100_bases GCGCATCGGGGCACGGTATTCCCTGCCCCATTCATTCTGATGTAAGCCTCGGTTAGCACTCAAGCAAAAGCCAAAGCTCA GTTCAGTTAAGCCCGTTTTA
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Zn-Dependent Hydrolase Including Glyoxylase; Metallo-Beta-Lactamase; Beta-Lactamase Class B; Twin-Arginine Translocation Pathway Signal; Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Protein; Signal Peptide; Beta-Lactamase-Like Protein; Beta-Lactamase; Exported Metallo-Beta-Lactamase Superfamily Protein; Hydrolase
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTLLNNLSLASFKPQFAAAMLVAGMATAQAAPLQVSHFNPGENSIFAVSSSFISGEHEMMLVDAQFQKNDAQTLVNTIKA SGKKLTLVYISHSDPDFYFGLDVIKQNFPEVEIVATQTTVDDIKASMEGKLAYWGPILKDNAPSQLVLPKVVTTNSFSID GEQVLIEGLEDAHPKHTFLWVPSAKTITGGVEVFDNTHVWIADTQSIESRQAWLAHLDKMSALSPETVIPGHYLGKARFD QRAISFTRDYIHAFENAAKTAKNSADLIAKMLALYPQIPSDVGLEISAKVIMGEMRWPM
Sequences:
>Translated_299_residues MTLLNNLSLASFKPQFAAAMLVAGMATAQAAPLQVSHFNPGENSIFAVSSSFISGEHEMMLVDAQFQKNDAQTLVNTIKA SGKKLTLVYISHSDPDFYFGLDVIKQNFPEVEIVATQTTVDDIKASMEGKLAYWGPILKDNAPSQLVLPKVVTTNSFSID GEQVLIEGLEDAHPKHTFLWVPSAKTITGGVEVFDNTHVWIADTQSIESRQAWLAHLDKMSALSPETVIPGHYLGKARFD QRAISFTRDYIHAFENAAKTAKNSADLIAKMLALYPQIPSDVGLEISAKVIMGEMRWPM >Mature_298_residues TLLNNLSLASFKPQFAAAMLVAGMATAQAAPLQVSHFNPGENSIFAVSSSFISGEHEMMLVDAQFQKNDAQTLVNTIKAS GKKLTLVYISHSDPDFYFGLDVIKQNFPEVEIVATQTTVDDIKASMEGKLAYWGPILKDNAPSQLVLPKVVTTNSFSIDG EQVLIEGLEDAHPKHTFLWVPSAKTITGGVEVFDNTHVWIADTQSIESRQAWLAHLDKMSALSPETVIPGHYLGKARFDQ RAISFTRDYIHAFENAAKTAKNSADLIAKMLALYPQIPSDVGLEISAKVIMGEMRWPM
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32813; Mature: 32682
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLNNLSLASFKPQFAAAMLVAGMATAQAAPLQVSHFNPGENSIFAVSSSFISGEHEMM CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEHHHCCCCCEEE LVDAQFQKNDAQTLVNTIKASGKKLTLVYISHSDPDFYFGLDVIKQNFPEVEIVATQTTV EEECCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEHHHHHCCCCCEEEEEECCCH DDIKASMEGKLAYWGPILKDNAPSQLVLPKVVTTNSFSIDGEQVLIEGLEDAHPKHTFLW HHHHHHHCCCEEEECCCCCCCCCCCEECCEEEECCCCCCCCHHHHEECHHCCCCCEEEEE VPSAKTITGGVEVFDNTHVWIADTQSIESRQAWLAHLDKMSALSPETVIPGHYLGKARFD CCCCCEEECCEEEECCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH QRAISFTRDYIHAFENAAKTAKNSADLIAKMLALYPQIPSDVGLEISAKVIMGEMRWPM HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCC >Mature Secondary Structure TLLNNLSLASFKPQFAAAMLVAGMATAQAAPLQVSHFNPGENSIFAVSSSFISGEHEMM CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEHHHCCCCCEEE LVDAQFQKNDAQTLVNTIKASGKKLTLVYISHSDPDFYFGLDVIKQNFPEVEIVATQTTV EEECCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEHHHHHCCCCCEEEEEECCCH DDIKASMEGKLAYWGPILKDNAPSQLVLPKVVTTNSFSIDGEQVLIEGLEDAHPKHTFLW HHHHHHHCCCEEEECCCCCCCCCCCEECCEEEECCCCCCCCHHHHEECHHCCCCCEEEEE VPSAKTITGGVEVFDNTHVWIADTQSIESRQAWLAHLDKMSALSPETVIPGHYLGKARFD CCCCCEEECCEEEECCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH QRAISFTRDYIHAFENAAKTAKNSADLIAKMLALYPQIPSDVGLEISAKVIMGEMRWPM HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA