Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_008577 |
Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117919538
Identifier: 117919538
GI number: 117919538
Start: 1282436
End: 1283089
Strand: Reverse
Name: 117919538
Synonym: Shewana3_1089
Alternate gene names: NA
Gene position: 1283089-1282436 (Counterclockwise)
Preceding gene: 117919539
Following gene: 117919535
Centisome position: 25.81
GC content: 52.6
Gene sequence:
>654_bases ATGAATACCACTGAAAATCCACCAGCCGTTTTACATGCCATTATCGACCCTCTGTGCGGTTGGTGTTATGCGGCCGCACC GTTGTTTGATGCCGCAGCCGCTGCCGGATTTACCATTAAACTCCACGCAGGCGGCATGCTCACAGGCCCAAGACGCAAAC AGATTGATAATCAATGGCGCGACTATGTAATGCCCCATGATCAGCGTATTGCCGCGCTAACCGGACAAGCCTTTGGTAAG AGCTACTATGAAGGCCTATTGCGTGACACCAGTATCCTATTGGATTCGGCGCCGCCCATCAGGGCGCTACTCGCTGTGGC CGCCTTAGGAGGCGATGATTTAGCCTACTTACATGCGGTGCAGCTCGCCCATTATCGCGATGGCAAGTGCGCGAGCGATG AAAACAACCTGCATCTTTTAGCGGAAAAATTGGGGATAGATGGCGCCGCCTTCGCCCGGGAATACGCCGAAAATGAAGAA GCCCTTTATCAACATATCGTCGCTTCGCGGGCATTAATGAATCAGCTCGGCGCCCAAGGGTTTCCCTCCGTGGCGCTAGA GACCGATGAAGGCCACTTAAAGCTTATCAATCACAGCCGCTTTTACGGTCAACCTTCGAAGTGGCTTGAATATCTGAAAG AGCAGCTATCCTAA
Upstream 100 bases:
>100_bases ACGGTATTCCCTGCCCCATTCATTCTGATGTAAGCCTCGGTTAGCACTCAAGCAAAAGCCAAAGCTCAGTTCAGTTAAGC CCGTTTTATAGGAAGTTCCC
Downstream 100 bases:
>100_bases TCGGCAGCGTTCTTATCAAGTTGGTAATTAAAAGCATACGCCTTAGGAAGTTTACTACCTAAGGCGTAATATATTAGCCC TGAGTACAAAGCGATTTTCT
Product: putative protein-disulfide isomerase
Products: NA
Alternate protein names: DSBA Oxidoreductase; Thioredoxin Domain-Containing Protein; DSBA-Like Thioredoxin Domain-Containing Protein; Thioredoxin Domain-Containing Protein DsbA Family
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MNTTENPPAVLHAIIDPLCGWCYAAAPLFDAAAAAGFTIKLHAGGMLTGPRRKQIDNQWRDYVMPHDQRIAALTGQAFGK SYYEGLLRDTSILLDSAPPIRALLAVAALGGDDLAYLHAVQLAHYRDGKCASDENNLHLLAEKLGIDGAAFAREYAENEE ALYQHIVASRALMNQLGAQGFPSVALETDEGHLKLINHSRFYGQPSKWLEYLKEQLS
Sequences:
>Translated_217_residues MNTTENPPAVLHAIIDPLCGWCYAAAPLFDAAAAAGFTIKLHAGGMLTGPRRKQIDNQWRDYVMPHDQRIAALTGQAFGK SYYEGLLRDTSILLDSAPPIRALLAVAALGGDDLAYLHAVQLAHYRDGKCASDENNLHLLAEKLGIDGAAFAREYAENEE ALYQHIVASRALMNQLGAQGFPSVALETDEGHLKLINHSRFYGQPSKWLEYLKEQLS >Mature_217_residues MNTTENPPAVLHAIIDPLCGWCYAAAPLFDAAAAAGFTIKLHAGGMLTGPRRKQIDNQWRDYVMPHDQRIAALTGQAFGK SYYEGLLRDTSILLDSAPPIRALLAVAALGGDDLAYLHAVQLAHYRDGKCASDENNLHLLAEKLGIDGAAFAREYAENEE ALYQHIVASRALMNQLGAQGFPSVALETDEGHLKLINHSRFYGQPSKWLEYLKEQLS
Specific function: Unknown
COG id: COG3531
COG function: function code O; Predicted protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23773; Mature: 23773
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTENPPAVLHAIIDPLCGWCYAAAPLFDAAAAAGFTIKLHAGGMLTGPRRKQIDNQWR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHH DYVMPHDQRIAALTGQAFGKSYYEGLLRDTSILLDSAPPIRALLAVAALGGDDLAYLHAV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH QLAHYRDGKCASDENNLHLLAEKLGIDGAAFAREYAENEEALYQHIVASRALMNQLGAQG HHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC FPSVALETDEGHLKLINHSRFYGQPSKWLEYLKEQLS CCCEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MNTTENPPAVLHAIIDPLCGWCYAAAPLFDAAAAAGFTIKLHAGGMLTGPRRKQIDNQWR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHH DYVMPHDQRIAALTGQAFGKSYYEGLLRDTSILLDSAPPIRALLAVAALGGDDLAYLHAV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH QLAHYRDGKCASDENNLHLLAEKLGIDGAAFAREYAENEEALYQHIVASRALMNQLGAQG HHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC FPSVALETDEGHLKLINHSRFYGQPSKWLEYLKEQLS CCCEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA