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The map label for this gene is 117919511

Identifier: 117919511

GI number: 117919511

Start: 1247092

End: 1248450

Strand: Reverse

Name: 117919511

Synonym: Shewana3_1062

Alternate gene names: NA

Gene position: 1248450-1247092 (Counterclockwise)

Preceding gene: 117919513

Following gene: 117919510

Centisome position: 25.11

GC content: 48.79

Gene sequence:

>1359_bases
TTGGCTACTGAATATAAAAACCGCAACATTAAGACGATACTCACCTTTATCGTCCCTTCGCTGATCGGTCTGCTGCTGTT
TATGACCCCTATCAGCTACAACGATGCGATTACCATTCCCATCGCAATCATCTCTAAAGCACTGCAAAGCGTGTTAAGCG
ATGTATTAACCTTAATCGTGACTGTGATTGTTGTCGCCATGGCCTTGGCTTCGTTGCTGACTAAGTTACTCAAACCTAAG
TTTGTGTTGAACAATCACTTTCTCAATGGGTTACTCAACATCAGCCCGCTGTGGCTTGCGACGCGCGTCGTCGGCGCTGT
ATTTATTGTGCTGACCTACTTTGGCATTGGCCCCGAAGCCATCAACTCTTCAAGCACTGGCGCCTTAGTACTGAACGACC
TATTACCCGTACTCTTCTCGGTGTTTATCTTCGCCGGTATGTTACTGCCACTGCTGTTAAACTTCGGTCTATTAGAGCTA
TTTGGCACCCTGCTGACCAAGGTAATGCGCCCCGTGTTTAACCTGCCAGGTCGCAGCGCCATCGACTGTATGGCCTCTTG
GTTAGGTGATGGTAGCGTTGGGATTTTGCTAACCAGCAAGCAATACGAAGCGCGTTTTTACACCCAAAGAGAAGCCGCGG
TTATCGGTACTACCTTCTCGGCGGTATCAATTACCTTCAGCTTAGTGGTGATCTCGCAGGTGAAGTTGGAACAAATGTTT
GTCCCCTTCTACCTGACCGTATGTTTAGCGGGTTTTGCGGCGGCCGTGATTGTGCCTAAGCTGCCACCGCTGTCCTGGAA
AAAAGATAACTATATCGACGATACGCCACGTCAACCCGACGATGAAATGATCCCCGCTGGACACGGCGCACTCTCTTGGG
GCTTTGATAAAGCGCTTGAGAAAGCCGCCAGTGCTGGTGGTGTCAAAGCCGTTTTAAATGAAGGCGTTAAAAACGTTATC
GATATGGTATTTGGCATTATCCCAGTGGTAATGGCCATTGGTACTACGGCGCTGATCATCGCTGAGCATACGCCTATCTT
CAATTACTTAGGTATGCCGTTTATTCCGTTACTGGAACTGCTGCATATCCCAGAAGCCACCGAAGCCTCTAAAACTATCG
TTGTGGGCTTTGCCGATATGTTTATCCCGTCGATTTTAGCCAGCTCTATCGAATCGGATATGACCCGCTTTGTGATTGCA
GCCTTATCAGTAACCCAGCTGATTTACATGAGTGAAGTCGGCGCACTGCTGATTGGCAGTAAGATCCCAGTGAACTTTGT
TGAGCTATTCGTCGTGTTCGTACTGCGCACCTTAGTCACTCTGCCAGTGATTGCCGGCGTGGCTCACCTGCTGTTCTAA

Upstream 100 bases:

>100_bases
AGTTGAATGAAAATGCACCTAACATCCGCCTAACATGCGGCTTTGAGGGGCAATTTGTTCAAGTTTATTTGTGCGACTCG
TACTTTTAAGGTGTACACCA

Downstream 100 bases:

>100_bases
GCGCAACATCACCTTAAATATCAAGGGGAGCCAGATTCACTGACTCCCCTTTTTTATACTGATTCAAACACGAATTCGTA
CACAAACAGGCAGTTTTGAT

Product: nucleoside recognition domain-containing protein

Products: NA

Alternate protein names: ORF A [H]

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MATEYKNRNIKTILTFIVPSLIGLLLFMTPISYNDAITIPIAIISKALQSVLSDVLTLIVTVIVVAMALASLLTKLLKPK
FVLNNHFLNGLLNISPLWLATRVVGAVFIVLTYFGIGPEAINSSSTGALVLNDLLPVLFSVFIFAGMLLPLLLNFGLLEL
FGTLLTKVMRPVFNLPGRSAIDCMASWLGDGSVGILLTSKQYEARFYTQREAAVIGTTFSAVSITFSLVVISQVKLEQMF
VPFYLTVCLAGFAAAVIVPKLPPLSWKKDNYIDDTPRQPDDEMIPAGHGALSWGFDKALEKAASAGGVKAVLNEGVKNVI
DMVFGIIPVVMAIGTTALIIAEHTPIFNYLGMPFIPLLELLHIPEATEASKTIVVGFADMFIPSILASSIESDMTRFVIA
ALSVTQLIYMSEVGALLIGSKIPVNFVELFVVFVLRTLVTLPVIAGVAHLLF

Sequences:

>Translated_452_residues
MATEYKNRNIKTILTFIVPSLIGLLLFMTPISYNDAITIPIAIISKALQSVLSDVLTLIVTVIVVAMALASLLTKLLKPK
FVLNNHFLNGLLNISPLWLATRVVGAVFIVLTYFGIGPEAINSSSTGALVLNDLLPVLFSVFIFAGMLLPLLLNFGLLEL
FGTLLTKVMRPVFNLPGRSAIDCMASWLGDGSVGILLTSKQYEARFYTQREAAVIGTTFSAVSITFSLVVISQVKLEQMF
VPFYLTVCLAGFAAAVIVPKLPPLSWKKDNYIDDTPRQPDDEMIPAGHGALSWGFDKALEKAASAGGVKAVLNEGVKNVI
DMVFGIIPVVMAIGTTALIIAEHTPIFNYLGMPFIPLLELLHIPEATEASKTIVVGFADMFIPSILASSIESDMTRFVIA
ALSVTQLIYMSEVGALLIGSKIPVNFVELFVVFVLRTLVTLPVIAGVAHLLF
>Mature_451_residues
ATEYKNRNIKTILTFIVPSLIGLLLFMTPISYNDAITIPIAIISKALQSVLSDVLTLIVTVIVVAMALASLLTKLLKPKF
VLNNHFLNGLLNISPLWLATRVVGAVFIVLTYFGIGPEAINSSSTGALVLNDLLPVLFSVFIFAGMLLPLLLNFGLLELF
GTLLTKVMRPVFNLPGRSAIDCMASWLGDGSVGILLTSKQYEARFYTQREAAVIGTTFSAVSITFSLVVISQVKLEQMFV
PFYLTVCLAGFAAAVIVPKLPPLSWKKDNYIDDTPRQPDDEMIPAGHGALSWGFDKALEKAASAGGVKAVLNEGVKNVID
MVFGIIPVVMAIGTTALIIAEHTPIFNYLGMPFIPLLELLHIPEATEASKTIVVGFADMFIPSILASSIESDMTRFVIAA
LSVTQLIYMSEVGALLIGSKIPVNFVELFVVFVLRTLVTLPVIAGVAHLLF

Specific function: Unknown

COG id: COG3314

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 48819; Mature: 48688

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATEYKNRNIKTILTFIVPSLIGLLLFMTPISYNDAITIPIAIISKALQSVLSDVLTLIV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
TVIVVAMALASLLTKLLKPKFVLNNHFLNGLLNISPLWLATRVVGAVFIVLTYFGIGPEA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHH
INSSSTGALVLNDLLPVLFSVFIFAGMLLPLLLNFGLLELFGTLLTKVMRPVFNLPGRSA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
IDCMASWLGDGSVGILLTSKQYEARFYTQREAAVIGTTFSAVSITFSLVVISQVKLEQMF
HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VPFYLTVCLAGFAAAVIVPKLPPLSWKKDNYIDDTPRQPDDEMIPAGHGALSWGFDKALE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
KAASAGGVKAVLNEGVKNVIDMVFGIIPVVMAIGTTALIIAEHTPIFNYLGMPFIPLLEL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHCCCCHHHHHHH
LHIPEATEASKTIVVGFADMFIPSILASSIESDMTRFVIAALSVTQLIYMSEVGALLIGS
HHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIPVNFVELFVVFVLRTLVTLPVIAGVAHLLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
ATEYKNRNIKTILTFIVPSLIGLLLFMTPISYNDAITIPIAIISKALQSVLSDVLTLIV
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH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CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA