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The map label for this gene is yhbV [H]

Identifier: 117919513

GI number: 117919513

Start: 1249906

End: 1250823

Strand: Reverse

Name: yhbV [H]

Synonym: Shewana3_1064

Alternate gene names: 117919513

Gene position: 1250823-1249906 (Counterclockwise)

Preceding gene: 117919514

Following gene: 117919511

Centisome position: 25.16

GC content: 51.74

Gene sequence:

>918_bases
GTGACTGGCAATAGCCCTAGCGATAACCACGAAGAAGAAACGATTATGAAAATTTCCCTCGGCCCACTGCTCTATTGCTG
GGAAAAACAGCAGGTCATCGACTTTTATCAGCAGGTGGCCAACAGCCAGATCCCGTTAGTTTATCTGGGTGAAGCCGTTT
GTAGCCGTCGACGCGAGCTCAAGTTTGGCGACTATCTCGAACTGGCCAAAATGCTTAAATCTGCGGGTAAAGAGGTGGTG
CTGTCGACGCTCGCCCTTATCGAAGCGCCCTCAGAATACACAGAGCTTAAACGTCAGGTCGACAATGGCGAATTTAGCAT
TGAGGCCAACGACATGGCGGCCGTGTATCTCGCTAAGGAGCACAAGCTGCCCTTTGTCTGCGGTGCCAGCATCAACAACT
ACAACCGCGCCAGTTTAGATATTTTGCAGCGCTTTGGTATGCATCGCTTTGTGATGCCTGTAGAACTGTCTAAGACTTGG
CTAAACCAAGTAATAGAGAGCAAGCCCGTATTCGAAGTCGAAGTGCTTGGCCATGGCTACTTGCCACTCGCCCACTCGGC
GCGCTGCTTTACCGCTAGGCATCAACACTTGTCGAAGGACAGCTGCGAAACCGTTTGCCGCCAATACAGCAAGGGCTTAC
TGGCACAGACGCAAGAGGCGCAACCTTTGCTCAGGTTAAACGGCATCCAAACCCAGTCGGCCAGCTGTGTCGATTTACGC
AGCGAAATCAATGAAATGATAAAGATGGACGTCGATGTGTTTCGGGTTTCGCCCAGCAGCTTAGCCTGCATCACTAAGGC
CGATGCGCTGGTCGAGGCGTTAAAGACTGGGGCAACAGACGCTCACTACCCTCTTAACGATGAGCACTGTAACGGTTACT
GGTTTGGCGAAGCGGGACTGAAATCCTTAAGCTACTGA

Upstream 100 bases:

>100_bases
TATCTTAATCAGCCAGATAAATTCCAGACGCAGGCCCATTGGGAGCAAGCCCTCGCGAAAGTCTCCGAAGGGCAAATTAC
CACCTTAGGCGCCTACGAGC

Downstream 100 bases:

>100_bases
AATACTTAAGCTGATAGCATTATGGGCTATCAGCTTAATCATTCACTCGGGAGCTTGCTCCTGAGCGAGTGATTGTGGAG
TAAGCAGCAGCGCTTGCCGT

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTGNSPSDNHEEETIMKISLGPLLYCWEKQQVIDFYQQVANSQIPLVYLGEAVCSRRRELKFGDYLELAKMLKSAGKEVV
LSTLALIEAPSEYTELKRQVDNGEFSIEANDMAAVYLAKEHKLPFVCGASINNYNRASLDILQRFGMHRFVMPVELSKTW
LNQVIESKPVFEVEVLGHGYLPLAHSARCFTARHQHLSKDSCETVCRQYSKGLLAQTQEAQPLLRLNGIQTQSASCVDLR
SEINEMIKMDVDVFRVSPSSLACITKADALVEALKTGATDAHYPLNDEHCNGYWFGEAGLKSLSY

Sequences:

>Translated_305_residues
MTGNSPSDNHEEETIMKISLGPLLYCWEKQQVIDFYQQVANSQIPLVYLGEAVCSRRRELKFGDYLELAKMLKSAGKEVV
LSTLALIEAPSEYTELKRQVDNGEFSIEANDMAAVYLAKEHKLPFVCGASINNYNRASLDILQRFGMHRFVMPVELSKTW
LNQVIESKPVFEVEVLGHGYLPLAHSARCFTARHQHLSKDSCETVCRQYSKGLLAQTQEAQPLLRLNGIQTQSASCVDLR
SEINEMIKMDVDVFRVSPSSLACITKADALVEALKTGATDAHYPLNDEHCNGYWFGEAGLKSLSY
>Mature_304_residues
TGNSPSDNHEEETIMKISLGPLLYCWEKQQVIDFYQQVANSQIPLVYLGEAVCSRRRELKFGDYLELAKMLKSAGKEVVL
STLALIEAPSEYTELKRQVDNGEFSIEANDMAAVYLAKEHKLPFVCGASINNYNRASLDILQRFGMHRFVMPVELSKTWL
NQVIESKPVFEVEVLGHGYLPLAHSARCFTARHQHLSKDSCETVCRQYSKGLLAQTQEAQPLLRLNGIQTQSASCVDLRS
EINEMIKMDVDVFRVSPSSLACITKADALVEALKTGATDAHYPLNDEHCNGYWFGEAGLKSLSY

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=293, Percent_Identity=49.4880546075085, Blast_Score=265, Evalue=4e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 34219; Mature: 34088

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGNSPSDNHEEETIMKISLGPLLYCWEKQQVIDFYQQVANSQIPLVYLGEAVCSRRREL
CCCCCCCCCCCHHEEEEEECCCEEEEECHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCC
KFGDYLELAKMLKSAGKEVVLSTLALIEAPSEYTELKRQVDNGEFSIEANDMAAVYLAKE
CCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCEEEEEEECC
HKLPFVCGASINNYNRASLDILQRFGMHRFVMPVELSKTWLNQVIESKPVFEVEVLGHGY
CCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEECCCCC
LPLAHSARCFTARHQHLSKDSCETVCRQYSKGLLAQTQEAQPLLRLNGIQTQSASCVDLR
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCCHHHHCCCCCCCCHHHHHH
SEINEMIKMDVDVFRVSPSSLACITKADALVEALKTGATDAHYPLNDEHCNGYWFGEAGL
HHHHHHHHHCHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHH
KSLSY
HHCCC
>Mature Secondary Structure 
TGNSPSDNHEEETIMKISLGPLLYCWEKQQVIDFYQQVANSQIPLVYLGEAVCSRRREL
CCCCCCCCCCHHEEEEEECCCEEEEECHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCC
KFGDYLELAKMLKSAGKEVVLSTLALIEAPSEYTELKRQVDNGEFSIEANDMAAVYLAKE
CCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCEEEEEEECC
HKLPFVCGASINNYNRASLDILQRFGMHRFVMPVELSKTWLNQVIESKPVFEVEVLGHGY
CCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEECCCCC
LPLAHSARCFTARHQHLSKDSCETVCRQYSKGLLAQTQEAQPLLRLNGIQTQSASCVDLR
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCCHHHHCCCCCCCCHHHHHH
SEINEMIKMDVDVFRVSPSSLACITKADALVEALKTGATDAHYPLNDEHCNGYWFGEAGL
HHHHHHHHHCHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHH
KSLSY
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]