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The map label for this gene is torT [H]

Identifier: 117919501

GI number: 117919501

Start: 1231087

End: 1232154

Strand: Reverse

Name: torT [H]

Synonym: Shewana3_1052

Alternate gene names: 117919501

Gene position: 1232154-1231087 (Counterclockwise)

Preceding gene: 117919503

Following gene: 117919499

Centisome position: 24.78

GC content: 50.66

Gene sequence:

>1068_bases
ATGGGAAAATTTTGGCAAGCTTTGCTCACACTCACCACTTTTGGCCTGTTATGTTTATCGTCTGCCAATGCCAACAGCCA
AACTTGGCCATTAGAGCAACGCCATCCCTTTAATGCCAAAATTCAACAGGCGCAGGCACTTGATTATCATCCTCTGAGTA
AAGCACAACAGGCTTGGCGCATTTGTGCCTTAGTGCCTCATCTTAAGGACGCCTATTGGATTGGCATCGACTACGGCCTG
ATCCAACAGGCGAAACACCTCGGTGTGTCGCTGGATCTGTTCGAAGCGGGCAGCTACTACCATCAAGATAAACAGCTCGA
GCAATTAAGCGCATGTATGAAGGGAGATTACGATGCAATTTTGCTCGGCGCCGTGAGCCCCAATCTGCTCGAACATTTCT
CAGAGCCGTTAACCAAACCTGTGCTTGCCCTAGTGAATAAACTCAATGCTGAGCAAGTGCAGACCCATATCGGCGTTAAC
TGGTATCAAATGGGGCTAAGCGCGGGCAATTTTATTAAGGCAGATGCCAAGGCGCATTCCCCAACCCAGCCGACCACCTT
GGCCCTCTTAGCGGGTCCCGAAAACCTAGGTGGCACAGATTTAGTCGAACAAGGCATTCGCCATGCCCTTGAGGGCAGCA
ATGTCAGCATCAGTGCGATTCAGCATGCCGATAACAATCGCAATCTCTACCGCGATCAATTACAGATACTGCTTAAAGCC
CAGCGCCCCAACTATATTCTTGGCAGTGCGGTGGCGATAGAAGCCGCCGTCAGCACCCTCAAACAAAAACAGCTGACGCA
AGACATCAAGCTGGTGAGCAGTTACTTATCCCCCGCGATTCTGCGCGGCTTGAAGCGACAAAAAGTGGTCTACAGCAATG
ATGACTTGGTCGTGTTACAGGGCAAACTCGCCATCGATGTCACGGTAAAACAACTCGAAGGCGCCGCACCTTTTGGCGAT
ATAGGTCCTGCTATCGTTGAGCGCACGACTTCACCAAATACCCTATCGGATCTTAACGTTAGCCTCGCCGAAGCGGATTT
TTATCCCTTGTATCAAGTGCGCCCCTGA

Upstream 100 bases:

>100_bases
AGTCTGCCGGTTAAACTACTTCGCGATAAAGATAAAGGCGCCACACTTGTTCCTTCTGTTACAATGCCTTCGAGATAATC
ACTGTGGATGATACGAGACA

Downstream 100 bases:

>100_bases
GCGCTTTACATAGCGATTAACTCAACGCTCAACACAATATTTAGTTAGAGATTAGTCATCCACCTTAGCGGCAAACAAAT
AGCCCTCACCATGGACTGTG

Product: TMAO reductase system periplasmic protein TorT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MGKFWQALLTLTTFGLLCLSSANANSQTWPLEQRHPFNAKIQQAQALDYHPLSKAQQAWRICALVPHLKDAYWIGIDYGL
IQQAKHLGVSLDLFEAGSYYHQDKQLEQLSACMKGDYDAILLGAVSPNLLEHFSEPLTKPVLALVNKLNAEQVQTHIGVN
WYQMGLSAGNFIKADAKAHSPTQPTTLALLAGPENLGGTDLVEQGIRHALEGSNVSISAIQHADNNRNLYRDQLQILLKA
QRPNYILGSAVAIEAAVSTLKQKQLTQDIKLVSSYLSPAILRGLKRQKVVYSNDDLVVLQGKLAIDVTVKQLEGAAPFGD
IGPAIVERTTSPNTLSDLNVSLAEADFYPLYQVRP

Sequences:

>Translated_355_residues
MGKFWQALLTLTTFGLLCLSSANANSQTWPLEQRHPFNAKIQQAQALDYHPLSKAQQAWRICALVPHLKDAYWIGIDYGL
IQQAKHLGVSLDLFEAGSYYHQDKQLEQLSACMKGDYDAILLGAVSPNLLEHFSEPLTKPVLALVNKLNAEQVQTHIGVN
WYQMGLSAGNFIKADAKAHSPTQPTTLALLAGPENLGGTDLVEQGIRHALEGSNVSISAIQHADNNRNLYRDQLQILLKA
QRPNYILGSAVAIEAAVSTLKQKQLTQDIKLVSSYLSPAILRGLKRQKVVYSNDDLVVLQGKLAIDVTVKQLEGAAPFGD
IGPAIVERTTSPNTLSDLNVSLAEADFYPLYQVRP
>Mature_354_residues
GKFWQALLTLTTFGLLCLSSANANSQTWPLEQRHPFNAKIQQAQALDYHPLSKAQQAWRICALVPHLKDAYWIGIDYGLI
QQAKHLGVSLDLFEAGSYYHQDKQLEQLSACMKGDYDAILLGAVSPNLLEHFSEPLTKPVLALVNKLNAEQVQTHIGVNW
YQMGLSAGNFIKADAKAHSPTQPTTLALLAGPENLGGTDLVEQGIRHALEGSNVSISAIQHADNNRNLYRDQLQILLKAQ
RPNYILGSAVAIEAAVSTLKQKQLTQDIKLVSSYLSPAILRGLKRQKVVYSNDDLVVLQGKLAIDVTVKQLEGAAPFGDI
GPAIVERTTSPNTLSDLNVSLAEADFYPLYQVRP

Specific function: Upon binding a putative inducer it probably interacts with torS and allows it to play a role in the induction of the torCAD operon for trimethylamine N-oxide reductase [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787228, Length=298, Percent_Identity=33.8926174496644, Blast_Score=177, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761
- InterPro:   IPR014301 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 38956; Mature: 38825

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKFWQALLTLTTFGLLCLSSANANSQTWPLEQRHPFNAKIQQAQALDYHPLSKAQQAWR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHH
ICALVPHLKDAYWIGIDYGLIQQAKHLGVSLDLFEAGSYYHQDKQLEQLSACMKGDYDAI
HHHHHHCCCCCEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEE
LLGAVSPNLLEHFSEPLTKPVLALVNKLNAEQVQTHIGVNWYQMGLSAGNFIKADAKAHS
EEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCCCCEEECCCCCCC
PTQPTTLALLAGPENLGGTDLVEQGIRHALEGSNVSISAIQHADNNRNLYRDQLQILLKA
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHC
QRPNYILGSAVAIEAAVSTLKQKQLTQDIKLVSSYLSPAILRGLKRQKVVYSNDDLVVLQ
CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCEEECCCCEEEEE
GKLAIDVTVKQLEGAAPFGDIGPAIVERTTSPNTLSDLNVSLAEADFYPLYQVRP
CCEEEEEEHHHHCCCCCCCCCCHHHHCCCCCCCCHHHCCEEEECCCCCCEEEECC
>Mature Secondary Structure 
GKFWQALLTLTTFGLLCLSSANANSQTWPLEQRHPFNAKIQQAQALDYHPLSKAQQAWR
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHH
ICALVPHLKDAYWIGIDYGLIQQAKHLGVSLDLFEAGSYYHQDKQLEQLSACMKGDYDAI
HHHHHHCCCCCEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEE
LLGAVSPNLLEHFSEPLTKPVLALVNKLNAEQVQTHIGVNWYQMGLSAGNFIKADAKAHS
EEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCCCCEEECCCCCCC
PTQPTTLALLAGPENLGGTDLVEQGIRHALEGSNVSISAIQHADNNRNLYRDQLQILLKA
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHC
QRPNYILGSAVAIEAAVSTLKQKQLTQDIKLVSSYLSPAILRGLKRQKVVYSNDDLVVLQ
CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCEEECCCCEEEEE
GKLAIDVTVKQLEGAAPFGDIGPAIVERTTSPNTLSDLNVSLAEADFYPLYQVRP
CCEEEEEEHHHHCCCCCCCCCCHHHHCCCCCCCCHHHCCEEEECCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]