Click here to switch to the map view.

The map label for this gene is 117919494

Identifier: 117919494

GI number: 117919494

Start: 1222470

End: 1223654

Strand: Reverse

Name: 117919494

Synonym: Shewana3_1045

Alternate gene names: NA

Gene position: 1223654-1222470 (Counterclockwise)

Preceding gene: 117919497

Following gene: 117919483

Centisome position: 24.61

GC content: 49.11

Gene sequence:

>1185_bases
GTGTTATATCTTAAAGGGCTAAAGAAAAGCCATAAAATCAGTAGACTGCTCCAAATCGCCATCGCCTTGACCTTGATGGT
CGGCTTAGTGCAATTGTGGCAGACAAGCCTACTACAAGGTCAGCTGCTTCTAAAGTCCCAAACGCAAAAGATGGCCAGAT
TACTGGTGCAACAAACGGCCTACAGCGCGGCGCCCGCCCTGCAATTGCAAAACGATGAACAGCTCCAATGGCTGGCCAGC
GCCTTAGTCGAAGATCCTAAGGTGATGTCGGCGGCTATTTTCAGCGACCAAGGTATACGCTTAGCCTTCGCCCAAAGCCT
GACCAATGAAGCCTTAGATCCCGAATCCGAAGACATGAGTTTGCTCCTAAGCAAGTATCCGCCCTATGTCGAACCCGTGA
TCCAAGATGGAAAAAATTTAGGCTATGTCGAGGTTAGACTCGATACCAAACTATTTTTTAATGAAATCAAAGAGGCACAT
AACCTGAATATGGAGCAGCAGCAAATGATGCTGCTGGTTGCCGGCCTTATCGGCATGTTGTTATCACGCGCCTTGTCCTT
TAAGCGCGCCGATTTTGACCGACGTCGCACCCGCGCCAAATTGCGTAAAAACCCTAAGAAGAATAAAGCCATAAAAGCAG
CCGAGGAACCTACAGCCGCGGATAATCAAGATACGCAGCAGGATGCAGTTATCGCAAGTGACACTGAGGCTCAGCAAAAG
CCAACAGAAGCTAAGAAGGCAAAAGAAAGCAAAGCAGCAACAGATCTCGACACTCAGCCCTTGGATAAATCGGCAGCAGG
TAAAGCGCCGGATGAAGACAGCAACGAAGCAATTGCCGAACCTAAAGCAAGGAAAACCAAAGCAACCACAGGGACAAAAG
CTGTGCTTGCGCCAGAACTCGTAGCATCAGAGAAAGCGCTTGATGTGAAGCCAGAGCTTAAACCAGAGAAAGATACAAAG
GATGGGGCATCATCTGAGTCTACGTCTCTGTCTCAGTCTAAAGCGGATACCAAGGAACAGACGACCCAAGCGACAGCTTC
AACAACTGAGTCGCAAAGCTCTACGCCAGCACCAAATAAACCTAAGGTTAAATCGGTGCGCCGAGTCAAAACCAATGCGG
CCAAATCCACCGCGGAGAAAGCCCCGGCACAACCGAGCGATTTAGATACCGATTCTACGGGTTAA

Upstream 100 bases:

>100_bases
ATTTTGGTTCAAGCTTTCCATAGGACTCGTGTTCTCCAACTATCGGGCTCACTCAGAATCAATTATGATTAGGCAAGCGC
TCTAACTATTAAGGGTCAAA

Downstream 100 bases:

>100_bases
TAGAAGCGTATCTGCCCAAACTGAAGCGTCTTGGGTTCAGCGCCGCCTTGCAAAATTATCCATCTAAGAGCCAGCAACAC
AGCTAAGCCGATTGAACTTG

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MLYLKGLKKSHKISRLLQIAIALTLMVGLVQLWQTSLLQGQLLLKSQTQKMARLLVQQTAYSAAPALQLQNDEQLQWLAS
ALVEDPKVMSAAIFSDQGIRLAFAQSLTNEALDPESEDMSLLLSKYPPYVEPVIQDGKNLGYVEVRLDTKLFFNEIKEAH
NLNMEQQQMMLLVAGLIGMLLSRALSFKRADFDRRRTRAKLRKNPKKNKAIKAAEEPTAADNQDTQQDAVIASDTEAQQK
PTEAKKAKESKAATDLDTQPLDKSAAGKAPDEDSNEAIAEPKARKTKATTGTKAVLAPELVASEKALDVKPELKPEKDTK
DGASSESTSLSQSKADTKEQTTQATASTTESQSSTPAPNKPKVKSVRRVKTNAAKSTAEKAPAQPSDLDTDSTG

Sequences:

>Translated_394_residues
MLYLKGLKKSHKISRLLQIAIALTLMVGLVQLWQTSLLQGQLLLKSQTQKMARLLVQQTAYSAAPALQLQNDEQLQWLAS
ALVEDPKVMSAAIFSDQGIRLAFAQSLTNEALDPESEDMSLLLSKYPPYVEPVIQDGKNLGYVEVRLDTKLFFNEIKEAH
NLNMEQQQMMLLVAGLIGMLLSRALSFKRADFDRRRTRAKLRKNPKKNKAIKAAEEPTAADNQDTQQDAVIASDTEAQQK
PTEAKKAKESKAATDLDTQPLDKSAAGKAPDEDSNEAIAEPKARKTKATTGTKAVLAPELVASEKALDVKPELKPEKDTK
DGASSESTSLSQSKADTKEQTTQATASTTESQSSTPAPNKPKVKSVRRVKTNAAKSTAEKAPAQPSDLDTDSTG
>Mature_394_residues
MLYLKGLKKSHKISRLLQIAIALTLMVGLVQLWQTSLLQGQLLLKSQTQKMARLLVQQTAYSAAPALQLQNDEQLQWLAS
ALVEDPKVMSAAIFSDQGIRLAFAQSLTNEALDPESEDMSLLLSKYPPYVEPVIQDGKNLGYVEVRLDTKLFFNEIKEAH
NLNMEQQQMMLLVAGLIGMLLSRALSFKRADFDRRRTRAKLRKNPKKNKAIKAAEEPTAADNQDTQQDAVIASDTEAQQK
PTEAKKAKESKAATDLDTQPLDKSAAGKAPDEDSNEAIAEPKARKTKATTGTKAVLAPELVASEKALDVKPELKPEKDTK
DGASSESTSLSQSKADTKEQTTQATASTTESQSSTPAPNKPKVKSVRRVKTNAAKSTAEKAPAQPSDLDTDSTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42927; Mature: 42927

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYLKGLKKSHKISRLLQIAIALTLMVGLVQLWQTSLLQGQLLLKSQTQKMARLLVQQTA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSAAPALQLQNDEQLQWLASALVEDPKVMSAAIFSDQGIRLAFAQSLTNEALDPESEDMS
HHHCCCEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHH
LLLSKYPPYVEPVIQDGKNLGYVEVRLDTKLFFNEIKEAHNLNMEQQQMMLLVAGLIGML
HHHHHCCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LSRALSFKRADFDRRRTRAKLRKNPKKNKAIKAAEEPTAADNQDTQQDAVIASDTEAQQK
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHCCEEECCCHHHHC
PTEAKKAKESKAATDLDTQPLDKSAAGKAPDEDSNEAIAEPKARKTKATTGTKAVLAPEL
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHCCCCCCCHHHHHHHH
VASEKALDVKPELKPEKDTKDGASSESTSLSQSKADTKEQTTQATASTTESQSSTPAPNK
HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PKVKSVRRVKTNAAKSTAEKAPAQPSDLDTDSTG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLYLKGLKKSHKISRLLQIAIALTLMVGLVQLWQTSLLQGQLLLKSQTQKMARLLVQQTA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSAAPALQLQNDEQLQWLASALVEDPKVMSAAIFSDQGIRLAFAQSLTNEALDPESEDMS
HHHCCCEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHH
LLLSKYPPYVEPVIQDGKNLGYVEVRLDTKLFFNEIKEAHNLNMEQQQMMLLVAGLIGML
HHHHHCCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LSRALSFKRADFDRRRTRAKLRKNPKKNKAIKAAEEPTAADNQDTQQDAVIASDTEAQQK
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHCCEEECCCHHHHC
PTEAKKAKESKAATDLDTQPLDKSAAGKAPDEDSNEAIAEPKARKTKATTGTKAVLAPEL
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHCCCCCCCHHHHHHHH
VASEKALDVKPELKPEKDTKDGASSESTSLSQSKADTKEQTTQATASTTESQSSTPAPNK
HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PKVKSVRRVKTNAAKSTAEKAPAQPSDLDTDSTG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA