Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919430
Identifier: 117919430
GI number: 117919430
Start: 1151928
End: 1152896
Strand: Direct
Name: 117919430
Synonym: Shewana3_0981
Alternate gene names: NA
Gene position: 1151928-1152896 (Clockwise)
Preceding gene: 117919429
Following gene: 117919431
Centisome position: 23.17
GC content: 48.61
Gene sequence:
>969_bases ATGTTGGATGCGATTTGTGTACTCACAACCGAGGCTGCGGTAGAGCAGGCTTCGTCGCCACTACGACTCAACCCTAATGT AATGGCTGGTGTCACTTACAGTGTGTTCAAATTTCAGCAGTTACCCGAGGCTGAGATTGAGCGTTTACGCCAACATTTAT ATTGCCCCGCCTGCTACGGCAAAGCCTATTTTCGTAAAGCATCTAAGGATGGTAGGGCCGCCTGTTTTGGCTCCCGTTAC CATAAGCTCGATTGCATCGAATTTAATCCGTCGGCGCAAAAGTCCCGTGAAGAACAAGATGCACTCGAAGTGCAGCAACA ACTGCTCGACGCCGATGCCTTGGTTATCGATTTTTCGCTCAATCCCAGTAATAAGAGACCATCTAGCTCAACGCTCAAAG TGAACGCTCCCCAAGAGCAAGAGGTTGGGTCCAAAAGTAAAACTGCAAATGAGACCGAGCCATTAGAGTCAGTGCAGGAG CCTAAAGCTGGCTATCAAGTGGCGACCGATAAGCCCGAGATAGCCATCACGGCAACGCGTACTCCGAGCCAAGGGCTAGA AAAGTTACTCCATAGCCTGCTGCGCGGCTCGGATCTGGCGACTTCGGATCTTTGGGTTTACACCGATGATGAGCGCAAGT ATCGCTGGCGGGCGAAGAATTTGTTTGTGAATTTTGCCGATGCGGATCCTACAGATTACAAACCCCATATGTACTGGGGC ACTATCTCCCACAGCGACCCGACGCTATCTTGGCTTAATCCCGCCGACAGTAAAGACATAGGTATTCCTATTGAGGCCGT TAAAACTAAACTGTTTAAGCGCTTTAATATCGAAGATAAACGGGATTTAGAGGGCGCAGGGCTTATCCTGTTTGGTAAGT GTTTTTGGAATAAGGATAAGACCCGCAAAATTATCCAGCTTTGGGACAATGACTTGCGGCGGATTTTTATCTCAACCCTT GATGATTAA
Upstream 100 bases:
>100_bases CCATATTGCCGCCGAGTTTAGCCGCGCGACTCGCGAGCTATTTTCATCCGGCTTAAGACTTGAGATAAGCTCGCGAAGAT AAGGATTAGGGGAGCAAGAG
Downstream 100 bases:
>100_bases CCATCCGTGATGGGATTTGGTCGCGAGTGCGTGGTACACGCTGCGCTTTAATTCATCTTTTAAGGCGTACCCATGACTCT TTTGTGAGTTTTTGGGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MLDAICVLTTEAAVEQASSPLRLNPNVMAGVTYSVFKFQQLPEAEIERLRQHLYCPACYGKAYFRKASKDGRAACFGSRY HKLDCIEFNPSAQKSREEQDALEVQQQLLDADALVIDFSLNPSNKRPSSSTLKVNAPQEQEVGSKSKTANETEPLESVQE PKAGYQVATDKPEIAITATRTPSQGLEKLLHSLLRGSDLATSDLWVYTDDERKYRWRAKNLFVNFADADPTDYKPHMYWG TISHSDPTLSWLNPADSKDIGIPIEAVKTKLFKRFNIEDKRDLEGAGLILFGKCFWNKDKTRKIIQLWDNDLRRIFISTL DD
Sequences:
>Translated_322_residues MLDAICVLTTEAAVEQASSPLRLNPNVMAGVTYSVFKFQQLPEAEIERLRQHLYCPACYGKAYFRKASKDGRAACFGSRY HKLDCIEFNPSAQKSREEQDALEVQQQLLDADALVIDFSLNPSNKRPSSSTLKVNAPQEQEVGSKSKTANETEPLESVQE PKAGYQVATDKPEIAITATRTPSQGLEKLLHSLLRGSDLATSDLWVYTDDERKYRWRAKNLFVNFADADPTDYKPHMYWG TISHSDPTLSWLNPADSKDIGIPIEAVKTKLFKRFNIEDKRDLEGAGLILFGKCFWNKDKTRKIIQLWDNDLRRIFISTL DD >Mature_322_residues MLDAICVLTTEAAVEQASSPLRLNPNVMAGVTYSVFKFQQLPEAEIERLRQHLYCPACYGKAYFRKASKDGRAACFGSRY HKLDCIEFNPSAQKSREEQDALEVQQQLLDADALVIDFSLNPSNKRPSSSTLKVNAPQEQEVGSKSKTANETEPLESVQE PKAGYQVATDKPEIAITATRTPSQGLEKLLHSLLRGSDLATSDLWVYTDDERKYRWRAKNLFVNFADADPTDYKPHMYWG TISHSDPTLSWLNPADSKDIGIPIEAVKTKLFKRFNIEDKRDLEGAGLILFGKCFWNKDKTRKIIQLWDNDLRRIFISTL DD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36501; Mature: 36501
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDAICVLTTEAAVEQASSPLRLNPNVMAGVTYSVFKFQQLPEAEIERLRQHLYCPACYG CCCEEEEEECHHHHHHCCCCEEECCCEEECCHHHHHHHHCCCHHHHHHHHHHCCCCHHHH KAYFRKASKDGRAACFGSRYHKLDCIEFNPSAQKSREEQDALEVQQQLLDADALVIDFSL HHHHHHCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEC NPSNKRPSSSTLKVNAPQEQEVGSKSKTANETEPLESVQEPKAGYQVATDKPEIAITATR CCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCEEEEECC TPSQGLEKLLHSLLRGSDLATSDLWVYTDDERKYRWRAKNLFVNFADADPTDYKPHMYWG CCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCEEEEE TISHSDPTLSWLNPADSKDIGIPIEAVKTKLFKRFNIEDKRDLEGAGLILFGKCFWNKDK EECCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCH TRKIIQLWDNDLRRIFISTLDD HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLDAICVLTTEAAVEQASSPLRLNPNVMAGVTYSVFKFQQLPEAEIERLRQHLYCPACYG CCCEEEEEECHHHHHHCCCCEEECCCEEECCHHHHHHHHCCCHHHHHHHHHHCCCCHHHH KAYFRKASKDGRAACFGSRYHKLDCIEFNPSAQKSREEQDALEVQQQLLDADALVIDFSL HHHHHHCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEC NPSNKRPSSSTLKVNAPQEQEVGSKSKTANETEPLESVQEPKAGYQVATDKPEIAITATR CCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCEEEEECC TPSQGLEKLLHSLLRGSDLATSDLWVYTDDERKYRWRAKNLFVNFADADPTDYKPHMYWG CCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCEEEEE TISHSDPTLSWLNPADSKDIGIPIEAVKTKLFKRFNIEDKRDLEGAGLILFGKCFWNKDK EECCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCH TRKIIQLWDNDLRRIFISTLDD HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA