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The map label for this gene is mcp1 [H]

Identifier: 117919419

GI number: 117919419

Start: 1139692

End: 1140780

Strand: Reverse

Name: mcp1 [H]

Synonym: Shewana3_0970

Alternate gene names: 117919419

Gene position: 1140780-1139692 (Counterclockwise)

Preceding gene: 117919420

Following gene: 117919418

Centisome position: 22.94

GC content: 47.29

Gene sequence:

>1089_bases
ATGTGGTTTAACGCTCAACTCAAGTCTGAAAATAACGCTCTCAAGCAACAGCTCATTCAATTACAACAGCAGCATCAACA
AGAATTAGATGAACTAAAAACCATCATCCATGAACACGAAACAATGAAACAACAGTCACGCCAAGCGGCCGATCTGTTTA
CCGAGGTCATAGCCTGTCAAAATCAGGGCGGCGAAATGTTAAATGCGATCCGAGATGGCTTAGCGGGCAGTGCGACTCAA
CTCACCGAAGAAAAGGATTCTCTCTCCGAACTTGATGCCATTTTCGATCAAACTAGGCTCGCCATTGCGAACTTAGGCCA
AAGGGCACATGAGATAAACACTCAGGCTAGCCAAAGTATGGAAGCCGTGACCGCTCTTAATGGCACGACAGCGTCCATCA
ACCAGTTTGTTTCTGCCATTCAAGGGATCTCAGAGCAAACCAACCTACTTGCCCTCAATGCCGCCATTGAAGCTGCCCGC
GCGGGCGAAGCAGGCCGCGGTTTTGCCGTGGTCGCCGACGAAGTTAGGCAACTAGCGAGTAAGGCTCACGAGGCCAGCAG
CCAGATTGAAAAGTTGGTAAAACAGATAGTTACCCAAGCAAGCGAGATTAAAAATATTGTTCATACCAATCAATCCAGTG
CCAGCGATATTGCCGCCTCATCGACACAAATCGGCCACGTGGTTGAGGATGTCCTTCAGCGGTCACATAAAATGCAGCAG
GTGATCCATAATGCGGCAACCACCTCTTTCCTAAACACCACTAAACTCGACCATGCAGTCTGGAAGAGTAATGTTTACCA
ACTAATTGAAAAACCAAAGCATGATCATAGCGTTAATTCACATACCGAATGTCGCTTAGGCCAATGGTATTTCAAAGGAT
TTGGCGCGGAAAATTATCAGCATTTAAGCAACTTTAAAGCCCTAGATACTCCCCATAAGGCGGTACACGATGCGGGTAAA
GCGGCGTTGGCAGCGAGACAAAAAGGCAACTTGTCCGACATGGTTAAACAACTCCATGTGATGGAAGACGCCAGTATGCG
GGTAGTCCAGTGCATAGACCATTTGATGCATGATGTGTATCAGCGTTAA

Upstream 100 bases:

>100_bases
CTAATATTTAACCACCAGCAGCTTGCGATTTATTTCAACCTCGCTGGGGTTGCACCATAAAATTAATAAGCTGTCGCCAT
AACAATAACTAGAGGTTTAT

Downstream 100 bases:

>100_bases
TGGATTTTAGTCCCCCAAAGAGCACTCGCTGCTCTTTGGGTTTATTTATCCTGTAAAAGGCAAATTAGTAGCTTAGCCGA
GATACTTTTTTCACATTGCT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MWFNAQLKSENNALKQQLIQLQQQHQQELDELKTIIHEHETMKQQSRQAADLFTEVIACQNQGGEMLNAIRDGLAGSATQ
LTEEKDSLSELDAIFDQTRLAIANLGQRAHEINTQASQSMEAVTALNGTTASINQFVSAIQGISEQTNLLALNAAIEAAR
AGEAGRGFAVVADEVRQLASKAHEASSQIEKLVKQIVTQASEIKNIVHTNQSSASDIAASSTQIGHVVEDVLQRSHKMQQ
VIHNAATTSFLNTTKLDHAVWKSNVYQLIEKPKHDHSVNSHTECRLGQWYFKGFGAENYQHLSNFKALDTPHKAVHDAGK
AALAARQKGNLSDMVKQLHVMEDASMRVVQCIDHLMHDVYQR

Sequences:

>Translated_362_residues
MWFNAQLKSENNALKQQLIQLQQQHQQELDELKTIIHEHETMKQQSRQAADLFTEVIACQNQGGEMLNAIRDGLAGSATQ
LTEEKDSLSELDAIFDQTRLAIANLGQRAHEINTQASQSMEAVTALNGTTASINQFVSAIQGISEQTNLLALNAAIEAAR
AGEAGRGFAVVADEVRQLASKAHEASSQIEKLVKQIVTQASEIKNIVHTNQSSASDIAASSTQIGHVVEDVLQRSHKMQQ
VIHNAATTSFLNTTKLDHAVWKSNVYQLIEKPKHDHSVNSHTECRLGQWYFKGFGAENYQHLSNFKALDTPHKAVHDAGK
AALAARQKGNLSDMVKQLHVMEDASMRVVQCIDHLMHDVYQR
>Mature_362_residues
MWFNAQLKSENNALKQQLIQLQQQHQQELDELKTIIHEHETMKQQSRQAADLFTEVIACQNQGGEMLNAIRDGLAGSATQ
LTEEKDSLSELDAIFDQTRLAIANLGQRAHEINTQASQSMEAVTALNGTTASINQFVSAIQGISEQTNLLALNAAIEAAR
AGEAGRGFAVVADEVRQLASKAHEASSQIEKLVKQIVTQASEIKNIVHTNQSSASDIAASSTQIGHVVEDVLQRSHKMQQ
VIHNAATTSFLNTTKLDHAVWKSNVYQLIEKPKHDHSVNSHTECRLGQWYFKGFGAENYQHLSNFKALDTPHKAVHDAGK
AALAARQKGNLSDMVKQLHVMEDASMRVVQCIDHLMHDVYQR

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=114, Percent_Identity=42.1052631578947, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI2367378, Length=132, Percent_Identity=34.8484848484849, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1788195, Length=114, Percent_Identity=39.4736842105263, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1787690, Length=107, Percent_Identity=41.1214953271028, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1789453, Length=141, Percent_Identity=37.5886524822695, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 40038; Mature: 40038

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFNAQLKSENNALKQQLIQLQQQHQQELDELKTIIHEHETMKQQSRQAADLFTEVIACQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQGGEMLNAIRDGLAGSATQLTEEKDSLSELDAIFDQTRLAIANLGQRAHEINTQASQSM
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAVTALNGTTASINQFVSAIQGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRQLAS
HHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
KAHEASSQIEKLVKQIVTQASEIKNIVHTNQSSASDIAASSTQIGHVVEDVLQRSHKMQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIHNAATTSFLNTTKLDHAVWKSNVYQLIEKPKHDHSVNSHTECRLGQWYFKGFGAENYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHH
HLSNFKALDTPHKAVHDAGKAALAARQKGNLSDMVKQLHVMEDASMRVVQCIDHLMHDVY
HHHCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QR
CC
>Mature Secondary Structure
MWFNAQLKSENNALKQQLIQLQQQHQQELDELKTIIHEHETMKQQSRQAADLFTEVIACQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQGGEMLNAIRDGLAGSATQLTEEKDSLSELDAIFDQTRLAIANLGQRAHEINTQASQSM
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAVTALNGTTASINQFVSAIQGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRQLAS
HHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
KAHEASSQIEKLVKQIVTQASEIKNIVHTNQSSASDIAASSTQIGHVVEDVLQRSHKMQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIHNAATTSFLNTTKLDHAVWKSNVYQLIEKPKHDHSVNSHTECRLGQWYFKGFGAENYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHH
HLSNFKALDTPHKAVHDAGKAALAARQKGNLSDMVKQLHVMEDASMRVVQCIDHLMHDVY
HHHCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]