Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919420
Identifier: 117919420
GI number: 117919420
Start: 1141073
End: 1142446
Strand: Reverse
Name: 117919420
Synonym: Shewana3_0971
Alternate gene names: NA
Gene position: 1142446-1141073 (Counterclockwise)
Preceding gene: 117919421
Following gene: 117919419
Centisome position: 22.98
GC content: 51.75
Gene sequence:
>1374_bases ATGAACATGAACAACAACCAAAAAAACACTAAGCAAATCATCTTAGCCCTGCAAATCATCCTAGAACAACGCGACAGCGC GAGCATGGTCGCCTTGGCCAAAGAGCGCCATCCCGCGGATATTGCCGCCGCGCTCAGCACCTTTAGTCAGTCGCAGCAAT TAGTATTTTTGCAACTGGCACCGGCAAAAGTTGCCGCCGATTTACTGCGCTATTTAAGCGATGAGCAGCAAGCCGCATTA GTGCAACAGCTTGATAAAGCCACACTATCGTCGCTCTTGCTGACGATGGCGGCGGATGAGCGCGCCGATCTCTACAATCT GCTCGAACCTGAGCAGCAACAACTCTTCTTGCCCGTGTTAGCGCAGGCTAAACGGGAAGATCTGCGCACCTTAGCCGCCT ACGATAAAACCAAGGTCGGTGCAGCGATGACATCGGACTACACCTTGCTCAATAGTCGACATACCGCCACCCAAGCGATT GATATGCTTCGCACGGAAACCGCCGACAAAGAAACCATATATCAAGCCTATGTGGTTGATATGTTGGGGCGCTTAATTGG TACCGTCTCGCTACGGCAATTACTACTGGCCCAGCCAGAAGAACGGGTGGTCGATTTCATGAAACCCAACCCCATTGCCT TAGATGCTAACGCCCAATGCCAAGAAGCGGTGCAGATGATCGCCCATTACGATCTGCTAGCTTTGCCCATCATCAATGGC AAGGGGCAATTAGTGGGGATTGTGACCTATGACGATGCGATGGATATTGCCAGCTCACAGGCCGATCTCGAGTTCACCAA AACCGCGGCCATAGGCAATATCGAGCACAATTTAAAGACCGCAAGCATAGGACTACTCTACCGTAAGCGCGTGGTCTGGT TGGTGATTTTGGTCTTTGGCAATATCTTCTCAGGGGCGGGCATCGCCTTTTTCGAAGATACGATTTCGAGCTATGTGTCT TTAGTGTTCTTCCTGCCCTTACTTATCGACAGCGGCGGTAATGCTGGCTCACAATCCGCGACCTTAATGGTGCGAGGCTT AGCCACGGGCGAAGTGATACTCAAGGATTGGCTCTCATTGCTAGGGCGCGAGTTAGGGGTTGCGGGATTACTCGGTGCCA GCATGGCACTGGCGGTGTCCTTGCTCGGTTTCTGGCGCGGCGGCCCTGAAATTGCCCTCGTCGTCGCACTGACCATGCAA ATTGTGGTGCTCATTGGCAGCTTGATTGGTATGTCACTGCCCTTTTTACTCAGCAAGTTAAAAATGGATCCCGCTTCAGC CAGCGCGCCACTTATCACCTCAATAGCCGATATCATTGGTGTGCTGGTTTACTTTAGTATTGCCACTCTGATACTCGACT TACCGACGGCATAG
Upstream 100 bases:
>100_bases CTCGAATTCAGCCTAGGTAACGACCTTAAGGGAAACGCCCAGCAATTCGGTGCAGATATCACTTTTTTCTTTGGCTAATA GCTCGTTGGGAGAATGACCT
Downstream 100 bases:
>100_bases GTAAATTGAGACTTAAAGTGCCGTTGCTCAATACACTCACCCAAAGGATAACGGCACAGCTCTAGGCTCAAGATTGATGA TGGGAATACAAGGTATTCAG
Product: magnesium transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MNMNNNQKNTKQIILALQIILEQRDSASMVALAKERHPADIAAALSTFSQSQQLVFLQLAPAKVAADLLRYLSDEQQAAL VQQLDKATLSSLLLTMAADERADLYNLLEPEQQQLFLPVLAQAKREDLRTLAAYDKTKVGAAMTSDYTLLNSRHTATQAI DMLRTETADKETIYQAYVVDMLGRLIGTVSLRQLLLAQPEERVVDFMKPNPIALDANAQCQEAVQMIAHYDLLALPIING KGQLVGIVTYDDAMDIASSQADLEFTKTAAIGNIEHNLKTASIGLLYRKRVVWLVILVFGNIFSGAGIAFFEDTISSYVS LVFFLPLLIDSGGNAGSQSATLMVRGLATGEVILKDWLSLLGRELGVAGLLGASMALAVSLLGFWRGGPEIALVVALTMQ IVVLIGSLIGMSLPFLLSKLKMDPASASAPLITSIADIIGVLVYFSIATLILDLPTA
Sequences:
>Translated_457_residues MNMNNNQKNTKQIILALQIILEQRDSASMVALAKERHPADIAAALSTFSQSQQLVFLQLAPAKVAADLLRYLSDEQQAAL VQQLDKATLSSLLLTMAADERADLYNLLEPEQQQLFLPVLAQAKREDLRTLAAYDKTKVGAAMTSDYTLLNSRHTATQAI DMLRTETADKETIYQAYVVDMLGRLIGTVSLRQLLLAQPEERVVDFMKPNPIALDANAQCQEAVQMIAHYDLLALPIING KGQLVGIVTYDDAMDIASSQADLEFTKTAAIGNIEHNLKTASIGLLYRKRVVWLVILVFGNIFSGAGIAFFEDTISSYVS LVFFLPLLIDSGGNAGSQSATLMVRGLATGEVILKDWLSLLGRELGVAGLLGASMALAVSLLGFWRGGPEIALVVALTMQ IVVLIGSLIGMSLPFLLSKLKMDPASASAPLITSIADIIGVLVYFSIATLILDLPTA >Mature_457_residues MNMNNNQKNTKQIILALQIILEQRDSASMVALAKERHPADIAAALSTFSQSQQLVFLQLAPAKVAADLLRYLSDEQQAAL VQQLDKATLSSLLLTMAADERADLYNLLEPEQQQLFLPVLAQAKREDLRTLAAYDKTKVGAAMTSDYTLLNSRHTATQAI DMLRTETADKETIYQAYVVDMLGRLIGTVSLRQLLLAQPEERVVDFMKPNPIALDANAQCQEAVQMIAHYDLLALPIING KGQLVGIVTYDDAMDIASSQADLEFTKTAAIGNIEHNLKTASIGLLYRKRVVWLVILVFGNIFSGAGIAFFEDTISSYVS LVFFLPLLIDSGGNAGSQSATLMVRGLATGEVILKDWLSLLGRELGVAGLLGASMALAVSLLGFWRGGPEIALVVALTMQ IVVLIGSLIGMSLPFLLSKLKMDPASASAPLITSIADIIGVLVYFSIATLILDLPTA
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 49378; Mature: 49378
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMNNNQKNTKQIILALQIILEQRDSASMVALAKERHPADIAAALSTFSQSQQLVFLQLA CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEC PAKVAADLLRYLSDEQQAALVQQLDKATLSSLLLTMAADERADLYNLLEPEQQQLFLPVL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHH AQAKREDLRTLAAYDKTKVGAAMTSDYTLLNSRHTATQAIDMLRTETADKETIYQAYVVD HHHHHHHHHHHHHHHHHHCCHHHCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH MLGRLIGTVSLRQLLLAQPEERVVDFMKPNPIALDANAQCQEAVQMIAHYDLLALPIING HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHEEEEECC KGQLVGIVTYDDAMDIASSQADLEFTKTAAIGNIEHNLKTASIGLLYRKRVVWLVILVFG CCCEEEEEEECCHHHHCCCCCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHH NIFSGAGIAFFEDTISSYVSLVFFLPLLIDSGGNAGSQSATLMVRGLATGEVILKDWLSL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHH LGRELGVAGLLGASMALAVSLLGFWRGGPEIALVVALTMQIVVLIGSLIGMSLPFLLSKL HHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMDPASASAPLITSIADIIGVLVYFSIATLILDLPTA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNMNNNQKNTKQIILALQIILEQRDSASMVALAKERHPADIAAALSTFSQSQQLVFLQLA CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEC PAKVAADLLRYLSDEQQAALVQQLDKATLSSLLLTMAADERADLYNLLEPEQQQLFLPVL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHH AQAKREDLRTLAAYDKTKVGAAMTSDYTLLNSRHTATQAIDMLRTETADKETIYQAYVVD HHHHHHHHHHHHHHHHHHCCHHHCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH MLGRLIGTVSLRQLLLAQPEERVVDFMKPNPIALDANAQCQEAVQMIAHYDLLALPIING HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHEEEEECC KGQLVGIVTYDDAMDIASSQADLEFTKTAAIGNIEHNLKTASIGLLYRKRVVWLVILVFG CCCEEEEEEECCHHHHCCCCCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHH NIFSGAGIAFFEDTISSYVSLVFFLPLLIDSGGNAGSQSATLMVRGLATGEVILKDWLSL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHH LGRELGVAGLLGASMALAVSLLGFWRGGPEIALVVALTMQIVVLIGSLIGMSLPFLLSKL HHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMDPASASAPLITSIADIIGVLVYFSIATLILDLPTA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA